Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309A04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069424-1|AAL39569.1|  436|Drosophila melanogaster LD13611p pro...    92   5e-19
AE014298-531|AAF45874.2|  436|Drosophila melanogaster CG10802-PA...    92   5e-19
AF132153-1|AAD34741.1|  763|Drosophila melanogaster unknown prot...    29   2.9  
AE014297-138|AAF52100.1|  763|Drosophila melanogaster CG9761-PA ...    29   2.9  
BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p pro...    29   5.1  
AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA...    29   5.1  
BT001570-1|AAN71325.1|  341|Drosophila melanogaster RE20857p pro...    28   8.8  
AY071560-1|AAL49182.1|  411|Drosophila melanogaster RE62785p pro...    28   8.8  
AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p pro...    28   8.8  
AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA...    28   8.8  
AE013599-982|AAM71048.1|  341|Drosophila melanogaster CG12134-PB...    28   8.8  
AE013599-981|AAF58866.1|  411|Drosophila melanogaster CG12134-PA...    28   8.8  

>AY069424-1|AAL39569.1|  436|Drosophila melanogaster LD13611p
           protein.
          Length = 436

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 202 FLRKYQSKVLRCE-PTKEPIVDYGKTSLFEGFQITLENTILFPAGGGQPHDIGWLNDVEV 378
           FL+++++K++  E  T +     GK    +GF +  E+TILFP GGGQP D G L    V
Sbjct: 10  FLKEFKTKIVSSEFATLDWTDPSGKVEKLKGFNVICEDTILFPEGGGQPCDYGTLGGFPV 69

Query: 379 LQVLRKGDEALHFTREP--IDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
             V RKG  A+HF   P   +   EV   +++ RR DHMQQHSGQHL++
Sbjct: 70  KNVQRKGSTAVHFVESPTSFEQDAEVLLTLDYQRRLDHMQQHSGQHLIT 118


>AE014298-531|AAF45874.2|  436|Drosophila melanogaster CG10802-PA
           protein.
          Length = 436

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 202 FLRKYQSKVLRCE-PTKEPIVDYGKTSLFEGFQITLENTILFPAGGGQPHDIGWLNDVEV 378
           FL+++++K++  E  T +     GK    +GF +  E+TILFP GGGQP D G L    V
Sbjct: 10  FLKEFKTKIVSSEFATLDWTDPSGKVEKLKGFNVICEDTILFPEGGGQPCDYGTLGGFPV 69

Query: 379 LQVLRKGDEALHFTREP--IDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
             V RKG  A+HF   P   +   EV   +++ RR DHMQQHSGQHL++
Sbjct: 70  KNVQRKGSTAVHFVESPTSFEQDAEVLLTLDYQRRLDHMQQHSGQHLIT 118


>AF132153-1|AAD34741.1|  763|Drosophila melanogaster unknown
           protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 214 YQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILFPAGGGQPH 348
           Y    LR    K   V + + ++   F  +LEN+I FPAG  Q H
Sbjct: 533 YSFNKLRLPVNKTDWVRHARPAIVNAFYSSLENSIQFPAGILQGH 577


>AE014297-138|AAF52100.1|  763|Drosophila melanogaster CG9761-PA
           protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 214 YQSKVLRCEPTKEPIVDYGKTSLFEGFQITLENTILFPAGGGQPH 348
           Y    LR    K   V + + ++   F  +LEN+I FPAG  Q H
Sbjct: 533 YSFNKLRLPVNKTDWVRHARPAIVNAFYSSLENSIQFPAGILQGH 577


>BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p
           protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 492 LHMIKSSIPIDLLFDLYTHIYWLSCEVECLVTFPENLQHFNIIQPADVMRLSTS 331
           +H I S IP+  L  L TH+       E +  F  N +  + I+ A+V RL  S
Sbjct: 428 VHWINSHIPMHPLTALPTHVVLFDPLAENISVFLRNYRLLHRIEHAEVTRLEGS 481


>AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA,
           isoform A protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 492 LHMIKSSIPIDLLFDLYTHIYWLSCEVECLVTFPENLQHFNIIQPADVMRLSTS 331
           +H I S IP+  L  L TH+       E +  F  N +  + I+ A+V RL  S
Sbjct: 428 VHWINSHIPMHPLTALPTHVVLFDPLAENISVFLRNYRLLHRIEHAEVTRLEGS 481


>BT001570-1|AAN71325.1|  341|Drosophila melanogaster RE20857p
           protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 394 KGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
           +GDE   F R  +   I  K+  N+N    H Q+  G  LL+
Sbjct: 214 EGDEVASFERPDVTAAIRRKKAANFNLINAHNQEDGGVFLLA 255


>AY071560-1|AAL49182.1|  411|Drosophila melanogaster RE62785p
           protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 394 KGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
           +GDE   F R  +   I  K+  N+N    H Q+  G  LL+
Sbjct: 284 EGDEVASFERPDVTAAIRRKKAANFNLINAHNQEDGGVFLLA 325


>AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -3

Query: 477  SSIPIDLLFDLYTHIYW---LSCEVECLVTFPENLQHFNIIQPADVMRLSTSC 328
            + IPIDL  DL  H  +    S E   +VTF E L+ F+ +Q   +++  TSC
Sbjct: 1007 AEIPIDLE-DLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSC 1058


>AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA
            protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -3

Query: 477  SSIPIDLLFDLYTHIYW---LSCEVECLVTFPENLQHFNIIQPADVMRLSTSC 328
            + IPIDL  DL  H  +    S E   +VTF E L+ F+ +Q   +++  TSC
Sbjct: 1007 AEIPIDLE-DLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSC 1058


>AE013599-982|AAM71048.1|  341|Drosophila melanogaster CG12134-PB,
           isoform B protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 394 KGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
           +GDE   F R  +   I  K+  N+N    H Q+  G  LL+
Sbjct: 214 EGDEVASFERPDVTAAIRRKKAANFNLINAHNQEDGGVFLLA 255


>AE013599-981|AAF58866.1|  411|Drosophila melanogaster CG12134-PA,
           isoform A protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 394 KGDEALHFTREPIDVGIEVKQKVNWNRRFDHMQQHSGQHLLS 519
           +GDE   F R  +   I  K+  N+N    H Q+  G  LL+
Sbjct: 284 EGDEVASFERPDVTAAIRRKKAANFNLINAHNQEDGGVFLLA 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,651,232
Number of Sequences: 53049
Number of extensions: 482127
Number of successful extensions: 858
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)