Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309A02f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 223 1e-57
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 199 3e-50
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 168 6e-41
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 164 1e-39
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 156 3e-37
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 144 1e-33
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 142 3e-33
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 135 7e-31
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 130 2e-29
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 126 4e-28
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 107 2e-22
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 104 1e-21
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 101 1e-20
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 93 5e-18
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 91 1e-17
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 86 4e-16
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 86 4e-16
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 86 5e-16
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 85 7e-16
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 85 9e-16
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 85 1e-15
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 84 2e-15
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 83 3e-15
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 83 4e-15
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 82 7e-15
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 82 9e-15
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 81 1e-14
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 80 3e-14
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 80 3e-14
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 80 3e-14
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 80 3e-14
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 80 3e-14
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 3e-14
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 79 6e-14
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 79 8e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 79 8e-14
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 78 1e-13
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 78 1e-13
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 78 1e-13
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 77 2e-13
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 77 2e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 77 3e-13
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 77 3e-13
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 77 3e-13
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 77 3e-13
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 76 4e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 76 4e-13
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 76 6e-13
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 76 6e-13
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 6e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 76 6e-13
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 75 8e-13
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 75 1e-12
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 75 1e-12
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 75 1e-12
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 74 2e-12
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 74 2e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 2e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 74 2e-12
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 74 2e-12
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 74 2e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 73 3e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 3e-12
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 73 3e-12
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 4e-12
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 73 4e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 5e-12
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 73 5e-12
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 73 5e-12
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 72 7e-12
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 72 7e-12
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 72 9e-12
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 72 9e-12
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 71 1e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 71 1e-11
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 71 2e-11
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 71 2e-11
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 70 4e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 70 4e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 70 4e-11
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 70 4e-11
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 69 5e-11
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 5e-11
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 69 5e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 69 7e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 69 7e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 69 7e-11
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 69 7e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 69 9e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 69 9e-11
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 69 9e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 69 9e-11
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 69 9e-11
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 69 9e-11
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 69 9e-11
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 68 1e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 68 1e-10
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 68 1e-10
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 68 1e-10
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 68 2e-10
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 68 2e-10
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 68 2e-10
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 68 2e-10
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 68 2e-10
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 67 2e-10
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 67 2e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 67 3e-10
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 67 3e-10
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 67 3e-10
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 67 3e-10
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 3e-10
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 66 3e-10
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 66 3e-10
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 66 3e-10
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 66 3e-10
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 66 3e-10
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 66 3e-10
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 66 5e-10
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 66 5e-10
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 66 5e-10
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 66 5e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 66 5e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 66 6e-10
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 66 6e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 66 6e-10
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 66 6e-10
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 66 6e-10
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 65 8e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 65 8e-10
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 65 8e-10
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 65 8e-10
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 65 8e-10
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 65 8e-10
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 65 8e-10
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 65 1e-09
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 65 1e-09
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 65 1e-09
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 65 1e-09
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 65 1e-09
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 65 1e-09
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 65 1e-09
UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain co... 65 1e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 65 1e-09
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 65 1e-09
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 65 1e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 64 1e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 64 1e-09
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 64 1e-09
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 64 1e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 64 1e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 64 2e-09
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 64 2e-09
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 64 2e-09
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 64 2e-09
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 64 2e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 64 2e-09
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 64 2e-09
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 64 2e-09
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 63 3e-09
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 63 3e-09
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 63 3e-09
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 63 3e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 63 3e-09
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 63 3e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 63 3e-09
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 63 3e-09
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 63 3e-09
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 63 4e-09
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 4e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 63 4e-09
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 63 4e-09
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 63 4e-09
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 63 4e-09
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 63 4e-09
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 63 4e-09
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 63 4e-09
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 63 4e-09
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 62 6e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 6e-09
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 62 6e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 62 6e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 62 6e-09
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 6e-09
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 62 6e-09
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 62 6e-09
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 62 6e-09
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 7e-09
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 7e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 7e-09
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 7e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 62 7e-09
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 62 7e-09
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 62 7e-09
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 1e-08
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 62 1e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 62 1e-08
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 61 1e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 61 1e-08
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 61 1e-08
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 61 1e-08
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 1e-08
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 61 2e-08
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 61 2e-08
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 61 2e-08
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 61 2e-08
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 61 2e-08
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 61 2e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 60 2e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 60 2e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 60 2e-08
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 60 2e-08
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 60 2e-08
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 60 2e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 60 2e-08
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 60 3e-08
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 60 3e-08
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 60 3e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 60 3e-08
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 60 3e-08
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 60 3e-08
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 60 3e-08
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 60 3e-08
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 60 4e-08
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 60 4e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 60 4e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 60 4e-08
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 60 4e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 60 4e-08
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 60 4e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 4e-08
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 60 4e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 59 5e-08
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 59 5e-08
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 59 5e-08
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 59 5e-08
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 59 5e-08
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 59 5e-08
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 59 5e-08
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 59 5e-08
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 59 7e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 59 7e-08
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 59 7e-08
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 59 7e-08
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 59 7e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 58 9e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 9e-08
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 58 9e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 58 9e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 58 9e-08
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 58 9e-08
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 58 9e-08
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 1e-07
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 58 1e-07
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 58 1e-07
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 58 1e-07
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 58 1e-07
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 58 1e-07
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 58 1e-07
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 58 1e-07
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 58 1e-07
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 58 1e-07
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 58 1e-07
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 58 1e-07
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 58 1e-07
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 58 2e-07
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 58 2e-07
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 58 2e-07
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 58 2e-07
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 58 2e-07
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 58 2e-07
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 58 2e-07
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 58 2e-07
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 57 2e-07
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 2e-07
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 57 2e-07
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 57 2e-07
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 57 2e-07
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 57 2e-07
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 57 2e-07
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 57 2e-07
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 57 2e-07
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 57 2e-07
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 57 2e-07
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 57 3e-07
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 57 3e-07
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 57 3e-07
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 57 3e-07
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 57 3e-07
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 57 3e-07
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 56 4e-07
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 56 4e-07
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 56 4e-07
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 56 4e-07
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 56 4e-07
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 56 4e-07
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 56 4e-07
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 56 5e-07
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 5e-07
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 56 5e-07
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 56 5e-07
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 56 5e-07
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 56 5e-07
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 56 5e-07
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 56 5e-07
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 56 5e-07
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 56 7e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 55 9e-07
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 55 9e-07
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 55 9e-07
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 55 9e-07
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 55 1e-06
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 55 1e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 55 1e-06
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 55 1e-06
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 55 1e-06
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 55 1e-06
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 55 1e-06
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 55 1e-06
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 55 1e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 55 1e-06
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 54 2e-06
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 54 2e-06
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 54 2e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 54 2e-06
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 54 2e-06
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 54 2e-06
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 54 2e-06
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 54 2e-06
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 54 2e-06
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 54 2e-06
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 54 2e-06
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 54 2e-06
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 54 2e-06
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 54 2e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 2e-06
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 54 2e-06
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 54 2e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 54 2e-06
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 54 2e-06
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 54 2e-06
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 54 2e-06
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 54 3e-06
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 3e-06
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 54 3e-06
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 3e-06
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 54 3e-06
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 54 3e-06
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 54 3e-06
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 54 3e-06
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 54 3e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 54 3e-06
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 54 3e-06
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 3e-06
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 3e-06
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 54 3e-06
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 53 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 53 3e-06
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 3e-06
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 53 3e-06
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 53 3e-06
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 3e-06
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 53 3e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 53 3e-06
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 53 3e-06
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 53 3e-06
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 53 5e-06
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 5e-06
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 53 5e-06
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 53 5e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 53 5e-06
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 53 5e-06
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 53 5e-06
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 53 5e-06
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 52 6e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 52 6e-06
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 52 6e-06
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 52 6e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 6e-06
UniRef50_Q5BYM5 Cluster: SJCHGC04154 protein; n=1; Schistosoma j... 52 6e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 52 6e-06
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 52 6e-06
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 52 8e-06
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 52 8e-06
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 52 8e-06
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 52 8e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 52 8e-06
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 52 8e-06
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 52 8e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 52 1e-05
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 1e-05
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 52 1e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 52 1e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 52 1e-05
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 52 1e-05
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 52 1e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 52 1e-05
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 51 1e-05
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 1e-05
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 51 1e-05
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 51 1e-05
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 51 1e-05
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 51 1e-05
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 51 1e-05
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 51 1e-05
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 51 1e-05
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 51 1e-05
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 51 1e-05
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 51 1e-05
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 51 2e-05
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 51 2e-05
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 51 2e-05
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 51 2e-05
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 51 2e-05
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 51 2e-05
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 2e-05
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 51 2e-05
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 51 2e-05
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 51 2e-05
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 51 2e-05
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 50 2e-05
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 50 2e-05
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 50 2e-05
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 50 2e-05
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 50 2e-05
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 50 2e-05
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 50 2e-05
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 50 2e-05
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 50 2e-05
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 50 3e-05
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 50 3e-05
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 50 3e-05
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 50 3e-05
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 50 3e-05
UniRef50_A7RQ16 Cluster: Predicted protein; n=1; Nematostella ve... 50 3e-05
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 50 3e-05
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 50 3e-05
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 50 3e-05
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 50 4e-05
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 50 4e-05
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 50 4e-05
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 50 4e-05
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 50 4e-05
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 50 4e-05
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 50 4e-05
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 50 4e-05
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 50 4e-05
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 50 4e-05
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 50 4e-05
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 50 4e-05
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 49 6e-05
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 49 6e-05
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 49 6e-05
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 49 6e-05
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 6e-05
UniRef50_Q98SB0 Cluster: Putative helicase; n=1; Guillardia thet... 49 6e-05
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 223 bits (546), Expect = 1e-57
Identities = 106/165 (64%), Positives = 130/165 (78%)
Frame = +1
Query: 25 DSDDVPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLK 204
+ DD D + A SLL K+I Q LVES +E+ +KDP+SPLYSVKTFE L LK LLK
Sbjct: 51 NEDDEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLK 110
Query: 205 GVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQV 384
G+YAMGFN PSKIQE ALP +LA PPQN+IAQSQSGTGKTAAFVLAMLSRV++ + +PQ
Sbjct: 111 GIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQC 170
Query: 385 LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 519
LCL+PTYELA+QTG V +M KFC ++++ YA+RG +PRG+ IT
Sbjct: 171 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDIT 215
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 199 bits (486), Expect = 3e-50
Identities = 92/153 (60%), Positives = 118/153 (77%)
Frame = +1
Query: 58 ADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPS 237
A+ SLL K+IR LV S +E+ ++DP+SPLYSVK+FE L LKP LLKGVY MGFN PS
Sbjct: 3 AEQSLLNKLIRHSLVHSSNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPS 62
Query: 238 KIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAI 417
+IQE ALP ++A P QN+IAQSQSGTGKTAAF LAML V+ +PQ LC++PTYELA+
Sbjct: 63 RIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELAL 122
Query: 418 QTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 516
Q G+V +M +FC +++L YAVRG + RG+K+
Sbjct: 123 QIGQVLEQMGRFCADVRLVYAVRGNRIVRGTKV 155
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 168 bits (409), Expect = 6e-41
Identities = 84/160 (52%), Positives = 111/160 (69%), Gaps = 3/160 (1%)
Frame = +1
Query: 49 PNAADTSLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGF 225
P AD +LL K I++ + K + +++QR+DP SPLYS+ +F L LKP +LK + M F
Sbjct: 579 PVPADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNF 638
Query: 226 NAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTY 405
P++IQETALP LL +PP N+IAQ+QSGTGKTAAFVL ML R+D N PQ +CL+PT
Sbjct: 639 QFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTL 698
Query: 406 ELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--RGSKIT 519
ELA Q GEV KM KF +K+ YA++G + RG K+T
Sbjct: 699 ELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKLT 738
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 164 bits (398), Expect = 1e-39
Identities = 87/169 (51%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 DKKHNQETDSDDVPD-TPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEA 177
+K+ ++T+++ + T N D +GL E + ++IQ+ DPNSPLYSVKTFE
Sbjct: 15 EKEKQEQTNTNSTTESTNNQVDEEYERPGRSEGLDEFGIQLDIQQSDPNSPLYSVKTFEE 74
Query: 178 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 357
L LKP LLKGVYAMG+N PSKIQE ALP ++ P N+IAQSQSGTGKTAAF L ML+ V
Sbjct: 75 LGLKPELLKGVYAMGYNKPSKIQEAALP-IIIQSPNNLIAQSQSGTGKTAAFTLGMLNCV 133
Query: 358 DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
D + N PQ +C+SPT ELA+QT EV +K+ +F IK + E+P+
Sbjct: 134 DPSINAPQAICISPTKELALQTFEVISKIGQF-SNIKPLLYISEIEVPK 181
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 156 bits (378), Expect = 3e-37
Identities = 81/155 (52%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = +1
Query: 25 DSDDVPDTPNAADTSLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLL 201
+SD+ P T A+ S + K++ L E+ LD E+ R DP+ PL+SV+TF+ L+LK LL
Sbjct: 31 ESDEKPFT--RAEISYINKLLNSKLFETHDLDFEVLRSDPDHPLHSVRTFQELNLKEPLL 88
Query: 202 KGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQ 381
KG+ AMGF PS IQE AL +L++D PQNMIAQSQSGTGKTA F+LAMLSR+ ++ +Y Q
Sbjct: 89 KGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQ 148
Query: 382 VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR 486
LC++PT ELA+Q V +MA+F ++ AVR
Sbjct: 149 CLCMAPTRELALQIESVGRQMAQFMTDVSFATAVR 183
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 144 bits (349), Expect = 1e-33
Identities = 72/123 (58%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
Frame = +1
Query: 97 LVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPT 264
L+ S+ +++++ + DPNSPLYS K+F+ L L P LLKG+YAM F PSKIQE ALP
Sbjct: 66 LISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPL 125
Query: 265 LLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 444
LL +PP+NMIAQSQSGTGKTAAF L ML+RV+ PQ +CL+P+ ELA QT EV +M
Sbjct: 126 LLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEM 185
Query: 445 AKF 453
KF
Sbjct: 186 GKF 188
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 142 bits (345), Expect = 3e-33
Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
Frame = +1
Query: 52 NAADTSLLMKIIRQGLVESKLDIEIQRKDPNS-PLYSVKTFEALHLKPNLLKGVYAMGFN 228
N A+ S + +R+ LVE+ I + K N+ PLYSVK+FE L LK LL G+ +MGF
Sbjct: 11 NKAEKSFINHSLRKTLVETD-PINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFR 69
Query: 229 APSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYE 408
PS IQE ALP LL + P+N+IAQSQSGTGKTA F+L MLS++D N + Q LC++PT E
Sbjct: 70 KPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRE 129
Query: 409 LAIQTGEVAAKMAKFCPEIKLKYAVRG 489
L Q EVA M+KF +K+ A++G
Sbjct: 130 LVNQIAEVAIIMSKFMNNVKITCAIKG 156
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 135 bits (326), Expect = 7e-31
Identities = 66/125 (52%), Positives = 91/125 (72%), Gaps = 4/125 (3%)
Frame = +1
Query: 91 QGLVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 258
+GL+ + +E++ + DPNSPLYSV++F+ L+L +L+KG+ A GF PSKIQE AL
Sbjct: 120 EGLITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
Query: 259 PTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 438
P LL++PP+N+I QSQSGTGKTAAF L MLSRVD PQ +C++P+ ELA Q EV
Sbjct: 180 PLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVID 239
Query: 439 KMAKF 453
++ +F
Sbjct: 240 QIGQF 244
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 130 bits (314), Expect = 2e-29
Identities = 68/135 (50%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Frame = +1
Query: 94 GLVESKLDIEIQRKDPN--SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 267
GL ES D+E+Q DP+ SPL S+ +F L L ++ G+ AM F PSKIQ ALP +
Sbjct: 71 GLQESNYDVEVQLGDPDTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLM 130
Query: 268 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK-NYPQVLCLSPTYELAIQTGEVAAKM 444
L++PP+NMIAQSQSGTGKT AFV+ +LSRVD N+ N PQ L L+P+ ELA Q V +
Sbjct: 131 LSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSI 190
Query: 445 AKFCPEIKLKYAVRG 489
+FC + + A+ G
Sbjct: 191 GQFCTGLVVDAAIPG 205
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 126 bits (303), Expect = 4e-28
Identities = 65/151 (43%), Positives = 94/151 (62%)
Frame = +1
Query: 1 DKKHNQETDSDDVPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEAL 180
D ++T++DD+ D + + + R V++ I +Q DP + LYS K + L
Sbjct: 61 DDMERKDTENDDIDDFKSPKSDNSTFQF-RD--VQNNSSISVQTVDPKAQLYSAKDWSDL 117
Query: 181 HLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVD 360
+L P+LLKG+Y GFN PSKIQ ALP +L + P N+IAQ+ +G+GKTA F LAML +VD
Sbjct: 118 NLSPDLLKGIYNKGFNRPSKIQAAALPLIL-NSPMNLIAQAHNGSGKTATFALAMLGKVD 176
Query: 361 SNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ +PQ +CL PT ELA Q +V ++ KF
Sbjct: 177 TRIIHPQCMCLCPTRELARQNQDVVNELGKF 207
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 107 bits (256), Expect = 2e-22
Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Frame = +1
Query: 4 KKHNQETDSDDVPDTPNAADT-SLLMKIIRQGLVESKLDIEIQR-KDPNSPLYSVKTFEA 177
KK D DD + + ++ S+ + ++E D I+ ++P S FE
Sbjct: 36 KKWGDVEDDDDEEEAVSELNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFED 95
Query: 178 LHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSR 354
L+L P L+KG+Y M F PSKIQ +LP ++ P +++IAQ+ +G+GKT FVL MLSR
Sbjct: 96 LNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSR 155
Query: 355 VDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
VD PQ LC+ PT ELA Q EV KM KF
Sbjct: 156 VDPTLREPQALCICPTRELANQNMEVLQKMGKF 188
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 104 bits (249), Expect = 1e-21
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +1
Query: 97 LVESKLDIEIQRKDPNSPLY-SVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALPTLL 270
L++ + +IQ +Y S FE L L P LLKG++ MGF+ PSKIQ LP +L
Sbjct: 77 LLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMIL 136
Query: 271 ADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
P +++IAQ+ +G+GKT FVL MLSRVD N+ Q +C+ PT ELA Q V +M K
Sbjct: 137 TPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGK 196
Query: 451 F 453
F
Sbjct: 197 F 197
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 101 bits (241), Expect = 1e-20
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = +1
Query: 136 DPNSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSG 312
DP++P S KTFE L L LL+G+Y M F PSKIQ LP +L P +N+IAQ+ +G
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNG 137
Query: 313 TGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+GKT F L MLSR+D PQ L + PT EL +Q V +M K+
Sbjct: 138 SGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKY 184
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 92.7 bits (220), Expect = 5e-18
Identities = 48/92 (52%), Positives = 63/92 (68%)
Frame = +1
Query: 178 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 357
L L P+LLKG+ MGF PSKIQ+ ALP +L N+IAQ+++G+GKTA F LAMLS+V
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCALPLILGSCT-NIIAQAKNGSGKTATFALAMLSKV 162
Query: 358 DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ N Q LC+ PT ELA Q +V K+ +F
Sbjct: 163 NVNVPLVQALCICPTRELATQNVQVIQKLGQF 194
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 91.1 bits (216), Expect = 1e-17
Identities = 51/148 (34%), Positives = 85/148 (57%)
Frame = +1
Query: 55 AADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAP 234
A+ ++LL +QGL D+ Q +D + S FE L+ LL G+Y GF P
Sbjct: 2 ASSSTLLNDDWKQGLAAPPKDLRPQTEDVTATQGS--RFEDFGLRRELLMGIYTAGFERP 59
Query: 235 SKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELA 414
S IQE A+P L ++++A++++GTGKTA+F++ L+R++++ ++ Q L L PT ELA
Sbjct: 60 SPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELA 117
Query: 415 IQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
+QT +V + P +++ G L
Sbjct: 118 LQTSQVCKTLGAHIPNLQVMITTGGTTL 145
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 86.2 bits (204), Expect = 4e-16
Identities = 45/99 (45%), Positives = 61/99 (61%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F AL + P +L + A+G+ PS IQ A+P +LA +MI Q+Q+GTGKTAAF L ML
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAG--HDMIGQAQTGTGKTAAFALPML 82
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
SR+D + PQ+L L+PT ELA+Q A P +
Sbjct: 83 SRIDPARREPQLLILAPTRELALQVATAFETYASQLPGV 121
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 86.2 bits (204), Expect = 4e-16
Identities = 44/112 (39%), Positives = 68/112 (60%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V F+ + L P LL+GVY+ GF APS+IQ A+ + +++IAQ+QSGTGKT AF +
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
+LS++D ++ Q L L+PT ELA Q V ++ P + + + G +
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQ 201
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 85.8 bits (203), Expect = 5e-16
Identities = 45/95 (47%), Positives = 62/95 (65%)
Frame = +1
Query: 145 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 324
S S +F L L P +L+ V A+G+ PS IQ ++P LLA +++ +Q+GTGKT
Sbjct: 18 STFMSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAG--NHLLGVAQTGTGKT 75
Query: 325 AAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
AAF L +LSR+D+N PQ+L L+PT ELAIQ E
Sbjct: 76 AAFALPLLSRIDANVAEPQILVLAPTRELAIQVAE 110
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 85.4 bits (202), Expect = 7e-16
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = +1
Query: 154 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 333
YSV +FE + L NLL+G++A GF PS IQ+ A+ + ++IAQSQSGTGKTA +
Sbjct: 18 YSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKG--FDVIAQSQSGTGKTATY 75
Query: 334 VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 432
V+A L R+D K Q + L+PT ELA Q +V
Sbjct: 76 VIAALQRIDMMKEDTQAIILAPTRELANQIQKV 108
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 85.0 bits (201), Expect = 9e-16
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TFE +LK LL G++ GF PS IQE A+P + ++++A++++GTGKTAAFV+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPT 104
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 456
L +V N Q L + PT ELA+QT +V + K C
Sbjct: 105 LEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC 141
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Frame = +1
Query: 145 SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKT 324
SP S TF L + P +L+ + +G+ +P+ IQ +P L+A +++ +Q+GTGKT
Sbjct: 7 SPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAG--SDVVGLAQTGTGKT 64
Query: 325 AAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KYAV 483
AAF + MLS++D PQ L L PT ELA+Q E + + ++ + YAV
Sbjct: 65 AAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAV 124
Query: 484 RGEELPRGSKI 516
+ L RG+++
Sbjct: 125 QLAGLRRGAQV 135
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 83.8 bits (198), Expect = 2e-15
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ L++ P + K V MGF S IQ A+P +LA +++ Q+Q+GTGKTAAF + +L
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAH--KDVTGQAQTGTGKTAAFGIPLL 63
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
+DS N Q + L PT ELAIQ E K++ + P+I + G+ + R K
Sbjct: 64 ENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIK 118
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/110 (37%), Positives = 70/110 (63%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+ A+++ ML
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPML 148
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
R+D K++ Q L L PT ELA+Q +++ ++AK +K+ G L
Sbjct: 149 ERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL 198
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 83.0 bits (196), Expect = 4e-15
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
SV++F+ L L+ LLK + +GF PS IQ A+P LL +++I Q+Q+GTGKTAAF
Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEG--RDVIGQAQTGTGKTAAFG 60
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSK 513
L +L R+D+ Q L L PT ELA+Q +AK +++ G+ + P+ S
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 514 I 516
+
Sbjct: 121 L 121
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 82.2 bits (194), Expect = 7e-15
Identities = 43/100 (43%), Positives = 64/100 (64%)
Frame = +1
Query: 139 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 318
P +P+ +F +LK +L+ + +GF+ P+ IQE A+P LLA ++I Q+Q+GTG
Sbjct: 47 PVAPVAPAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAG--SDLIGQAQTGTG 104
Query: 319 KTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 438
KTAAF L +L+ +D +K Q L L+PT ELA Q G+ A
Sbjct: 105 KTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALA 144
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 81.8 bits (193), Expect = 9e-15
Identities = 42/87 (48%), Positives = 60/87 (68%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V F+ ++LK +LL+GVYA GF PS IQ+ A+ + ++IAQ+QSGTGKTA FV+
Sbjct: 29 VDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKG--HDVIAQAQSGTGKTATFVI 86
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQ 420
++L R+D++ Q L L+PT ELA Q
Sbjct: 87 SILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 81.4 bits (192), Expect = 1e-14
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 145 SPLYS-VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 321
+P+ S +++F L L+ LL + +G+ PS IQ +P LLA +++ ++Q+GTGK
Sbjct: 37 NPMTSPIESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAG--HDLLGEAQTGTGK 94
Query: 322 TAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
TAAF L +L R+D PQVL L+PT ELAIQ E + AK P
Sbjct: 95 TAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLP 140
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 80.2 bits (189), Expect = 3e-14
Identities = 44/95 (46%), Positives = 59/95 (62%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L P LLK + ++G+ P+ IQ A+ LL +++ +Q+GTGKTAAF L +
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDG--NDVLGLAQTGTGKTAAFSLPL 63
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
LSR+D+ KN PQ L L PT ELAIQ E A+
Sbjct: 64 LSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYAR 98
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 80.2 bits (189), Expect = 3e-14
Identities = 45/118 (38%), Positives = 65/118 (55%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
VKTFE L L NLL G+ F P+KIQ A+P LA ++I QS+SGTGKT +V+
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAK--MDLIIQSKSGTGKTLIYVI 81
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
A++ + N N P + + PT ELAIQ + + K + K + G ++ + K
Sbjct: 82 AVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRK 139
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V+TFE L L +LL+G+++ GF PS IQ+ A+ ++ ++++AQ+QSGTGKT F +
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG--KDVLAQAQSGTGKTGTFTI 112
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L R+D N+ QV+ L+P ELA Q +V + ++
Sbjct: 113 GALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY 150
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 79.8 bits (188), Expect = 3e-14
Identities = 41/101 (40%), Positives = 62/101 (61%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S F L L LL+ + +G+ +PS IQ +P LL + ++++ Q+Q+GTGKTA+F
Sbjct: 5 SFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNN--RDVLGQAQTGTGKTASFA 62
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
L +L+R+D + PQ L L+PT ELAIQ E + A + P
Sbjct: 63 LPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIP 103
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 79.8 bits (188), Expect = 3e-14
Identities = 43/98 (43%), Positives = 62/98 (63%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S FE L L +L + ++G+ PS IQE + LL + +++I Q+Q+GTGKTAAFV
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNN--KDIIGQAQTGTGKTAAFV 67
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
L +L +++ N N PQ+L L+PT ELAIQ E A+
Sbjct: 68 LPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYAR 105
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 79.8 bits (188), Expect = 3e-14
Identities = 43/111 (38%), Positives = 64/111 (57%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ L L LL+ + MGF PSKIQE A+P LLA+ ++M+A +Q+GTGKTAAF +
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAED-RDMVALAQTGTGKTAAFGFPL 60
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
L +D++ Q L ++PT EL +Q AK +++ G +
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNI 111
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 79.0 bits (186), Expect = 6e-14
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ TF L ++ + +K + +G P+ IQE A+P LL P + I +Q+GTGKTAAF L
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPT-DFIGLAQTGTGKTAAFGL 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE-IKLKYAVRGEELPR 504
+L +D+N ++ Q L LSPT EL Q + K K+ + I L+ GE++ R
Sbjct: 60 PVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDR 115
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 78.6 bits (185), Expect = 8e-14
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA F +++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQ 420
L +D Q L L+PT ELA+Q
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQ 121
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 78.6 bits (185), Expect = 8e-14
Identities = 38/96 (39%), Positives = 61/96 (63%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L +LK V +GF PS IQ++ +P LL +++ +Q+G+GKTAAF L +
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNG--NDVLGMAQTGSGKTAAFALPL 63
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L+++D ++ +PQ+L ++PT ELAIQ + K+
Sbjct: 64 LAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKY 99
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 77.8 bits (183), Expect = 1e-13
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
K F L L +++ V +G+ P+ IQ+ A+P +L+ ++++ Q+Q+GTGKTAAF L
Sbjct: 7 KDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSG--RDVLGQAQTGTGKTAAFALP 64
Query: 343 MLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 516
+++ +D S PQVL L+PT ELAIQ E AK P + + G+E GS+I
Sbjct: 65 LINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEY--GSQI 122
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F AL L+P + + + A GF PS IQE A+P LL+ ++I Q+Q+GTGKTAAF L ++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQD-HDIIGQAQTGTGKTAAFGLPIV 62
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+++ PQ L L PT ELAIQ E K
Sbjct: 63 QKIEPGLKKPQALILCPTRELAIQVNEEIKSFCK 96
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +1
Query: 154 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 333
+S ++E L + L++ + + F PSKIQ ALP +L D +N+IAQSQ+G+GKT F
Sbjct: 221 HSKNSWEELKIDNELIQILTYLKFFGPSKIQAYALPIIL-DSNRNLIAQSQNGSGKTLTF 279
Query: 334 VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
V+AMLS+++ Q +C+ PT ELA Q +V K K+
Sbjct: 280 VIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKY 319
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
KTF + LL+ + MGF P+ IQ A+P +L +++ Q+Q+GTGKTAAF +
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDG--KDVTGQAQTGTGKTAAFGIP 62
Query: 343 MLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
++ R+D + Q L LSPT ELAIQT E +++ K+ + + G+ + R
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIER 116
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/104 (37%), Positives = 60/104 (57%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+KTFE L + P + K + MG+ P +QE +P LL + +++A +Q+GTGKTAAF L
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGEN-NDVVALAQTGTGKTAAFGL 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
+L ++D PQ L L PT EL +Q +K+ +K+
Sbjct: 60 PLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKV 103
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 77.0 bits (181), Expect = 2e-13
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L +LL+ V +MGF + IQ +P L +++I Q+Q+GTGKTAAF L +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQG--KDIIGQAQTGTGKTAAFGLPL 60
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
L +VD++K Q + ++PT ELAIQ GE K+ K
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGK 95
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 76.6 bits (180), Expect = 3e-13
Identities = 42/102 (41%), Positives = 62/102 (60%)
Frame = +1
Query: 142 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 321
++P + F L L +++ V +G+ PS IQ +P LLA ++++ Q+Q+GTGK
Sbjct: 8 SNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAG--RDVLGQAQTGTGK 65
Query: 322 TAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 447
TAAF L +L+R N+ PQVL L+PT ELAIQ E + A
Sbjct: 66 TAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYA 107
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 76.6 bits (180), Expect = 3e-13
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ L LK +LLK + MGF PS+IQ ++P L ++I Q+Q+GTGKTAAF A++
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEG--HDIIGQAQTGTGKTAAFGCAII 63
Query: 349 SRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ D K P+ L L+PT ELAIQ E ++ K
Sbjct: 64 NNADFSGKKKSPKALILAPTRELAIQVNEELVRLGK 99
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/95 (40%), Positives = 63/95 (66%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ LK +LKG+ GF+ PS +Q ++P +L +++IAQ+Q+GTGKTAAF + +L
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQG--KDLIAQAQTGTGKTAAFAIPIL 104
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ ++ NK+ + L ++PT ELA+Q E K+ +F
Sbjct: 105 NTLNRNKDI-EALIITPTRELAMQISEEILKLGRF 138
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 76.6 bits (180), Expect = 3e-13
Identities = 43/105 (40%), Positives = 66/105 (62%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S K F +L L +L+K V ++G+ ++IQE +LP +L +++IAQ+++GTGKTAAF
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDG--KDLIAQAKTGTGKTAAFG 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
L +LS++ + QVL L PT EL Q + +A+ P IKL
Sbjct: 60 LGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKL 104
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 76.2 bits (179), Expect = 4e-13
Identities = 40/101 (39%), Positives = 61/101 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ LLK + G++ PS IQ+ A P L+ ++++ Q+Q+GTGKTAAF L +L
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLG--RDLVGQAQTGTGKTAAFALPLL 130
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
R++S + PQVL L+PT ELA+Q + A P +K+
Sbjct: 131 ERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKV 171
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 76.2 bits (179), Expect = 4e-13
Identities = 40/98 (40%), Positives = 62/98 (63%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
++ F+ L L LLK V +GF P+ IQ+ A+P +L N++ Q+ +GTGKTAA++L
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTAAYLL 58
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+L R+ K QVL ++PT ELA+Q + AK+ K+
Sbjct: 59 PVLQRIQRGKK-AQVLIVTPTRELALQVADEVAKLGKY 95
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 75.8 bits (178), Expect = 6e-13
Identities = 42/111 (37%), Positives = 60/111 (54%)
Frame = +1
Query: 118 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 297
+ I + +PL +V FE+ L ++ + MGF P+ IQ ALP LLA + I
Sbjct: 29 LPIPERSLMTPLTTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGA-NDFIG 87
Query: 298 QSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ +GTGKTAAF + ++ +DS Q L LSPT ELA+Q E + K
Sbjct: 88 LASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGK 138
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 75.8 bits (178), Expect = 6e-13
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L L NLL V ++GF + + IQ +P LLA ++++ ++Q+GTGKTAAF L L
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAG--KDVLGEAQTGTGKTAAFGLPAL 74
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KYAVRGEELPRG 507
+++D++ PQ++ L+PT ELA+Q E K +++ Y + ++L RG
Sbjct: 75 AKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERG 134
Query: 508 SKI 516
+++
Sbjct: 135 AQV 137
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 75.8 bits (178), Expect = 6e-13
Identities = 43/101 (42%), Positives = 61/101 (60%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L +L + +G+ PS IQ +P LL ++++ Q+Q+GTGKTAAF L +
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEG--RDVLGQAQTGTGKTAAFALPL 67
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK 468
LSR+D + PQVL L+PT ELA Q VAA ++ +K
Sbjct: 68 LSRLDLQRREPQVLVLAPTRELAQQ---VAASFVQYGRGVK 105
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 75.8 bits (178), Expect = 6e-13
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ + L N+L + G+ AP+ IQE +P LL+ N+I Q+Q+GTGKTAAF + ++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGK-NNVIGQAQTGTGKTAAFGIPLI 62
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQ 420
R+D N Q L L+PT ELA+Q
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQ 86
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 75.8 bits (178), Expect = 6e-13
Identities = 44/126 (34%), Positives = 71/126 (56%)
Frame = +1
Query: 55 AADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAP 234
A T+ ++ R G S +D E + + + +F+ + +K +LL+G+YA F P
Sbjct: 240 ATATTSMVPANRGGCRNSAVDDEKLVFETTEGVELIMSFDQMGIKNDLLRGIYAYSFEKP 299
Query: 235 SKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELA 414
S +Q+ A+ ++ ++IAQ+QSGTGKT+ F L + VD++ Q L SPT ELA
Sbjct: 300 SAVQQRAVLPIIQG--HDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELA 357
Query: 415 IQTGEV 432
QT +V
Sbjct: 358 SQTEKV 363
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 75.4 bits (177), Expect = 8e-13
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE L L +LL+ + +GF P+++QE A+P LL + +++A +Q+GTGKTAAF ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLL-EKDIDLVALAQTGTGKTAAFGFPVI 62
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
++D+N Q L LSPT EL +Q +K+
Sbjct: 63 QKIDANNRNTQALILSPTRELCLQITNELKNYSKY 97
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/115 (33%), Positives = 65/115 (56%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+K F ALHL+ +++G+ A F P+KIQ A+P L +++ QS+SGTGKT +V+
Sbjct: 24 MKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTG--MDLLVQSKSGTGKTLIYVV 81
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
L + +P+VL + PT ELA+Q ++ + + K+ + G ++ R
Sbjct: 82 TALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDVTR 136
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/110 (38%), Positives = 67/110 (60%)
Frame = +1
Query: 154 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF 333
+S T+E L + L++ + + F PSKIQ ALP +L+ +N+IAQSQ+G+GKT F
Sbjct: 157 HSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSN-KNLIAQSQNGSGKTLTF 215
Query: 334 VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
V+AML +++ + Q +C+ PT EL+ Q +V K+ +K+ AV
Sbjct: 216 VIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-NVKVFLAV 264
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 74.5 bits (175), Expect = 1e-12
Identities = 39/98 (39%), Positives = 61/98 (62%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
++L +++ Q L L+PT ELA Q +V + +
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDY 127
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ ++LK +LL+G+YA GF PS IQ+ A+ + ++IAQ+QSGTGKTA F +++L
Sbjct: 37 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAISIL 94
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQ 420
+++ ++ Q L L+PT ELA Q
Sbjct: 95 QQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 74.1 bits (174), Expect = 2e-12
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +1
Query: 139 PNSPLY-SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGT 315
PN L ++ F AL L P L G+ A+G+ + +Q +LP +L ++IAQ+ +G+
Sbjct: 17 PNPGLKCAMNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRG--LDVIAQAPTGS 74
Query: 316 GKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
GKTAAF L +L ++D Q L L PT ELA Q G+ K+A P +KL G
Sbjct: 75 GKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGG-- 132
Query: 496 LPRGSKI 516
+P G ++
Sbjct: 133 MPLGPQL 139
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/109 (37%), Positives = 61/109 (55%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L L NLL+ + G+ PS IQE ++P LL ++++ +Q+GTGKTAAF L +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEG--KDVLGLAQTGTGKTAAFTLPLL 65
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
+R + PQVL L+PT ELA Q +K +K+ G +
Sbjct: 66 ARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSD 114
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 73.7 bits (173), Expect = 2e-12
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = +1
Query: 148 PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 327
P V F L L+P LL+ + A+G+ P+ IQ A+P L+A ++++ Q+ +GTGKTA
Sbjct: 52 PAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAG--RDLLGQAATGTGKTA 109
Query: 328 AFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGE 429
AF L +L R+ ++ + PQ L L PT ELA+Q E
Sbjct: 110 AFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSE 146
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 73.7 bits (173), Expect = 2e-12
Identities = 37/112 (33%), Positives = 66/112 (58%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE +L+ +L+ V + F P++IQ +P +L N+I QSQ+GTGK+ AF+L ++
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRT--NLIGQSQTGTGKSHAFLLPLM 63
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
+DS PQ + ++PT ELA Q + A +++F + +K + G ++ +
Sbjct: 64 QLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEK 115
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 73.7 bits (173), Expect = 2e-12
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TFE LHL LLK V +GF+ P+ IQ A+P LA ++++A + +G+GKTAAF+L +
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIP--LALNGKDILASASTGSGKTAAFLLPV 248
Query: 346 LSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L R+ DS +VL L PT ELA+Q V +A+F
Sbjct: 249 LERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQF 287
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+++F+ L L +L+ + GF P+ IQE A+P L+ + ++++ Q+Q+GTGKTAAF +
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILI-EGKRDIVGQAQTGTGKTAAFGI 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
+L +D + Q L L+PT ELAIQ E
Sbjct: 60 PILETIDESSRNTQALILAPTRELAIQVAE 89
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 73.3 bits (172), Expect = 3e-12
Identities = 41/95 (43%), Positives = 57/95 (60%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L +LK + MGF PS IQ A+P LL +++I Q+Q+GTGKTAAF + +
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQG--KDVIGQAQTGTGKTAAFGVPI 64
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ R+ + Q L L+PT ELAIQ E K+ +
Sbjct: 65 VERLVPGQRAVQALVLTPTRELAIQVAEEITKIGR 99
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 73.3 bits (172), Expect = 3e-12
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L LLK + + F +P+K+Q+ +P +L +++I +SQ+G+GKTAAF + +
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEH--KDIIVKSQTGSGKTAAFAIPIC 63
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
VD ++N PQ L L PT ELAIQ E + +F
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF 98
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 73.3 bits (172), Expect = 3e-12
Identities = 37/94 (39%), Positives = 61/94 (64%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE LKP ++ V+ +GF P+ IQ+ +P +L +++I QSQ+GTGKT A++L +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK--ESVIGQSQTGTGKTHAYLLPLL 63
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+++D K+ QV+ +PT ELA Q + A K+ +
Sbjct: 64 NKIDPAKDVVQVVITAPTRELANQIYQEALKITQ 97
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/88 (38%), Positives = 56/88 (63%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L +LK + +G P+ IQE A+P +L +N+I ++++GTGKT A++L ++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKG--KNVIGKAETGTGKTLAYLLPII 61
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEV 432
++D +KN Q + LSPT+EL +Q V
Sbjct: 62 EKIDDSKNEMQAIILSPTHELGVQINNV 89
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 72.9 bits (171), Expect = 4e-12
Identities = 38/99 (38%), Positives = 65/99 (65%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L LK LL G+ GF + +QE A+P +LA ++++A++++GTGKT +F++ +L
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILAR--RDVVARAKNGTGKTGSFLIPIL 80
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
V+ K++ Q L L T ELA+QT +VA ++K P++
Sbjct: 81 QMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDV 119
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 72.5 bits (170), Expect = 5e-12
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+K FE L L LL G+ MGF P++IQ+ ++P LL + I +Q+GTGKTAAF L
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDG-DFIGLAQTGTGKTAAFGL 70
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+L +D N Q L L+PT ELA Q +M+K
Sbjct: 71 PLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSK 107
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 72.5 bits (170), Expect = 5e-12
Identities = 41/102 (40%), Positives = 64/102 (62%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
+ E R D +S + T+E LK +LLKG+Y++GF PS IQ+ A+ ++ +++
Sbjct: 23 EFEDLRSD-SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDG--RDIR 79
Query: 295 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 420
AQ+QSGTGKT AF +A L D +++ Q+L L+ T E+A Q
Sbjct: 80 AQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQ 121
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 72.5 bits (170), Expect = 5e-12
Identities = 41/112 (36%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+A+ L NLLK + GF+ P+ IQ +P ++ D Q+++ +++G+GKTAAFV+ M+
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMED--QDVVGMARTGSGKTAAFVIPMI 150
Query: 349 SRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
++ S+ K + L LSP+ ELA+QT +V ++ K ++K V G+ L
Sbjct: 151 EKLKSHSTKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSL 201
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 72.1 bits (169), Expect = 7e-12
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +++K +LK + +GF P+KIQE LP A +++I Q+Q+GTGKTAAF + +L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLP--FAFEGKDIIGQAQTGTGKTAAFAIPIL 60
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF-CPEIKL 471
S +D + N Q L ++PT ELA Q + + K+ C +I L
Sbjct: 61 SNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIAL 102
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 72.1 bits (169), Expect = 7e-12
Identities = 38/112 (33%), Positives = 65/112 (58%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ L L P +++ + ++G++ + IQE +P L+ +++ Q+Q+GTGKTAAF + +
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTG--KDLTGQAQTGTGKTAAFGIPAI 60
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
VD + N Q L L PT ELA+Q K++KF +++ GE + R
Sbjct: 61 EHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIER 112
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 71.7 bits (168), Expect = 9e-12
Identities = 40/121 (33%), Positives = 66/121 (54%)
Frame = +1
Query: 133 KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 312
KD Y+V F+ LK LL+ V GF P+++Q +L L + +I Q+++G
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLG--EQLICQAKAG 120
Query: 313 TGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 492
TGKTA FVL +L+ +++ N + L ++ T ELA Q + ++ KF +K++ G
Sbjct: 121 TGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGG 180
Query: 493 E 495
E
Sbjct: 181 E 181
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 71.7 bits (168), Expect = 9e-12
Identities = 37/106 (34%), Positives = 65/106 (61%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
D+ I+ D S FE LK LL G++ MG+ PS IQE ++P L+ ++++
Sbjct: 82 DLRIKTSDVTST--KGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDIL 137
Query: 295 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 432
A++++GTGK+ A+++ +L R+D K+ Q + + PT ELA+Q ++
Sbjct: 138 ARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L + ++ + +GF AP+ IQ A+P LL+ ++++ QSQ+GTGKTAAF L +
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSG--RDVVGQSQTGTGKTAAFSLPI 61
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAK 441
L R+D + Q + L+PT ELAIQ + A+
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDAMAQ 93
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L LK +L+ + +G+ PS IQ +P LL ++++ +Q+G+GKTAAF L +
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPL 64
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
L +D PQ+L L+PT ELA+Q E +K
Sbjct: 65 LQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSK 99
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 70.9 bits (166), Expect = 2e-11
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L L+K V +G+ P+ IQ A+P++LA +N++A +Q+GTGKTA+FVL +L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAG--KNVLAAAQTGTGKTASFVLPLL 60
Query: 349 SR-VDSNKNYP---QVLCLSPTYELAIQTGEVAAKMAKFCP 459
R D+ K P + + L+PT ELA+Q E + AK+ P
Sbjct: 61 HRFADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLP 101
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/110 (33%), Positives = 67/110 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE LK LL G++ MG+ PS IQE ++P L+ ++++A++++GTGK+ A+++ +L
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 140
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
R+D K+ Q + + PT ELA+Q ++ +++K K+ G L
Sbjct: 141 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL 190
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L P L + + MG+ ++IQE A+P L Q++I +S +GTGKT AF++ +L
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNS--QDIIGKSHTGTGKTVAFIVPIL 60
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
++++ PQ + L PT+ELA Q E K A + + G + R
Sbjct: 61 QNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQR 112
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 70.5 bits (165), Expect = 2e-11
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF +L L +L V MGF P+ IQ A+P LL ++++ +Q+GTGKTAAF L +
Sbjct: 46 TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLE--LRDVVGIAQTGTGKTAAFGLPL 103
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 447
L+ VD+++ Q L L+PT ELA+Q+ + A
Sbjct: 104 LAIVDADERNVQALVLAPTRELAMQSAQAIEDFA 137
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 69.7 bits (163), Expect = 4e-11
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L + + K + MGF PS IQ A+P +LA ++I Q+Q+GTGKTAAF + ++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAG--GDVIGQAQTGTGKTAAFGIPVV 65
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+V + + + Q L L+PT ELAIQ K++K
Sbjct: 66 EKVSTGR-HVQALILTPTRELAIQVSGEIQKLSK 98
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 69.7 bits (163), Expect = 4e-11
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TFE L +LK + ++G+N PS++Q +P LL QN++ +S++G+GKTA+F + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKG--QNLVVRSKTGSGKTASFAIPL 61
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQ 420
++ + N Q L + PT ELA+Q
Sbjct: 62 CENINVDYNNIQALIVVPTRELALQ 86
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 69.7 bits (163), Expect = 4e-11
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L +L++GV AMG+ P+ +Q A+P +LA ++++A +Q+GTGKTAAF L +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAG--RDLVASAQTGTGKTAAFALPVL 60
Query: 349 SRVDSNK-NYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+R+ ++ P+VL L PT EL Q +F
Sbjct: 61 ARLGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRF 96
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 69.7 bits (163), Expect = 4e-11
Identities = 40/96 (41%), Positives = 56/96 (58%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S +F L L L + + A GF+APS +Q +P L ++IAQ++SGTGKT FV
Sbjct: 35 SSASFGDLQLDERLTRALRAAGFDAPSPVQLACVP--LGRFGCDVIAQAKSGTGKTMTFV 92
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 444
+ L RVD+ + Q L L+PT E A+QT E +M
Sbjct: 93 VIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/94 (38%), Positives = 58/94 (61%)
Frame = +1
Query: 142 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 321
N PL T+E++ LKP L++ + G+ PS IQ+ A+ + +N++ QSQ+G+GK
Sbjct: 13 NVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI--YIISQGKNIMFQSQNGSGK 70
Query: 322 TAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQT 423
TA F + L+R+ +++ +SPT ELAIQT
Sbjct: 71 TATFSIGTLARLRLTSKTTELIIVSPTRELAIQT 104
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/99 (34%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F+ +L ++LK + G++ P+ IQ ++P ++ + ++++A +Q+GTGKTAAFVL +
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLN--KHVLASAQTGTGKTAAFVLPI 59
Query: 346 LSRVDSNKNY---PQVLCLSPTYELAIQTGEVAAKMAKF 453
L ++ N++ P+VL +SPT ELA Q + K +++
Sbjct: 60 LDKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRY 98
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 69.3 bits (162), Expect = 5e-11
Identities = 36/110 (32%), Positives = 63/110 (57%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F+ L ++L G+ MG+ PS+IQ A+P +L +N++ QSQSG+GKT AF+L+
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKG--KNLVMQSQSGSGKTMAFLLST 83
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
L ++ + QV+ + T ELA QT + ++ + ++ + G E
Sbjct: 84 LQLINRKDPFCQVIIIVNTRELARQTASIFDELTELMDDVTRLLCLPGYE 133
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 69.3 bits (162), Expect = 5e-11
Identities = 35/97 (36%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE++ L P L + + + GFN P+ IQ A+P +LA ++++A S++G+GKTAAF++ ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAG--RDIVACSKTGSGKTAAFLIPLI 69
Query: 349 SRVDSNKNYPQV--LCLSPTYELAIQTGEVAAKMAKF 453
+++ ++ + L L PT ELA+Q V + KF
Sbjct: 70 NKLQNHSTVVGIRGLILLPTRELALQIASVLKALLKF 106
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 68.9 bits (161), Expect = 7e-11
Identities = 32/87 (36%), Positives = 58/87 (66%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+++F+ L L NL++G+ G N P+ IQ +P L + +++I QS +G+GKT A++L
Sbjct: 2 IESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALEN--KDVIGQSPTGSGKTLAYLL 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQ 420
+ ++D++K Q + L+PT+ELA+Q
Sbjct: 60 PIFQKIDTSKREMQAIILAPTHELAMQ 86
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 68.9 bits (161), Expect = 7e-11
Identities = 40/112 (35%), Positives = 64/112 (57%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S F L L P LL V +GF + IQ+ ++P LLA +++I Q+++G+GKTAAF
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAG--KDIIGQAKTGSGKTAAFS 102
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 492
L +L++++ ++ Q L L PT ELA Q K+ + P +K+ G+
Sbjct: 103 LPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQ 154
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 68.9 bits (161), Expect = 7e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Frame = +1
Query: 100 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 279
++ ++D+E+ ++PN F +L P +LK + M F PS+IQ A+P L
Sbjct: 1 MQEQIDVELLPQEPNG-------FITFNLDPLILKALDKMNFKEPSRIQTEAIP--LIQK 51
Query: 280 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
Q++IA SQ+G+GKTA + + +RV++ Q L + PT ELA+Q K+ K+
Sbjct: 52 KQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKY 109
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 68.9 bits (161), Expect = 7e-11
Identities = 32/87 (36%), Positives = 57/87 (65%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V +F+ L + ++ +G+ G P+ IQ+ A+P L + +++I QSQ+G+GKT A++L
Sbjct: 2 VTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKN--KDIIGQSQTGSGKTLAYLL 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQ 420
+ ++DS+K Q L L+PT+EL +Q
Sbjct: 60 PIFQKIDSSKRETQALILAPTHELVMQ 86
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 68.9 bits (161), Expect = 7e-11
Identities = 35/96 (36%), Positives = 58/96 (60%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L + +LK + MGF P+++Q A+P +L + +++I S++G+GKTA F +++
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNN--EDLIVMSKTGSGKTAVFGVSI 61
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L + + PQ L L+P ELA+Q KMAK+
Sbjct: 62 LQLTNPEEAGPQGLILTPARELAVQVDNDIRKMAKY 97
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 68.5 bits (160), Expect = 9e-11
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F + L +L+ + AM F P+ IQ A+P LL Q+++ ++Q+GTGKTAAF L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEG--QDVLGEAQTGTGKTAAFGLPA 66
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEV----AAKM 444
L+++D++ QVL ++PT ELAIQ E AAKM
Sbjct: 67 LAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKM 103
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 68.5 bits (160), Expect = 9e-11
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+FE L L L V GF P+ IQ A+P LLA N+IA++++GTGKTAAF L +
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDA-NIIAKARTGTGKTAAFGLPL 105
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQ-TGEVAAKMAKFCPEIKLKY 477
+ + S +P L L PT ELA Q E+++ + P I Y
Sbjct: 106 IQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVY 150
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 68.5 bits (160), Expect = 9e-11
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = +1
Query: 178 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 357
L +KP L + +GF AP+ IQE A+P +L +++IA+S +GTGKT A+++ +L R+
Sbjct: 15 LKMKPFLQETWNRVGFTAPTPIQEEAIPLILEG--KDLIAESPTGTGKTLAYLIPILHRI 72
Query: 358 DSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
D Q + L+P++ELA+Q + K K
Sbjct: 73 DPESKAVQAVILAPSHELAMQIHQTIEKWTK 103
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 68.5 bits (160), Expect = 9e-11
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L P++++ V+ MGF + IQE A+P LA +++I Q+++GTGKTAAF + M+
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIP--LAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ Q L + PT ELA+Q E ++ K
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGK 95
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 68.5 bits (160), Expect = 9e-11
Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +1
Query: 121 EIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 300
E+ RK+ FE+L+L PN+ + G+ P+ IQ +P +L+ +++A
Sbjct: 14 ELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSG--VDVVAM 71
Query: 301 SQSGTGKTAAFVLAMLSRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+++G+GKTAAF++ ML ++ + + + L LSPT +LA QT + ++ KF ++++
Sbjct: 72 ARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKF-TDLRVS 130
Query: 475 YAVRGEEL 498
V G+ +
Sbjct: 131 LLVGGDSM 138
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 68.5 bits (160), Expect = 9e-11
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +1
Query: 130 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 303
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 31 KKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 88
Query: 304 QSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
+SG GKTA FVLA L +++ VL + T ELA Q + + +K+ P +K+
Sbjct: 89 KSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFF 148
Query: 484 RGEELPRGSKI 516
G + + ++
Sbjct: 149 GGLSIKKDEEV 159
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 68.5 bits (160), Expect = 9e-11
Identities = 37/129 (28%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Frame = +1
Query: 85 IRQGLVESKLDIEIQRKDPNSPLYSVKT----FEALHLKPNLLKGVYAMGFNAPSKIQET 252
I+ GL +K + + K N V T F+++ L P+LL+ + GF P+ IQ
Sbjct: 114 IKAGLEVAKKALSGKNKGKNKLGSGVVTGGGSFQSMGLHPSLLRSLLIRGFTTPTPIQRQ 173
Query: 253 ALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP---QVLCLSPTYELAIQT 423
A+P +++ PP++++ +++G+GKT A+++ +++R++ + + L L P+ ELA+Q
Sbjct: 174 AIPAIMSQPPRDVVGMARTGSGKTLAYLIPLINRLNGRHSPTFGIKSLILCPSRELAVQI 233
Query: 424 GEVAAKMAK 450
V ++A+
Sbjct: 234 LRVGKEIAR 242
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 68.1 bits (159), Expect = 1e-10
Identities = 37/112 (33%), Positives = 58/112 (51%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L + + MGF S IQ A+P +L +++I +Q+GTGKTAAF + +
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKG--KDIIGHAQTGTGKTAAFAIPTI 68
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
++ + Q L L PT EL IQ E K+ K+ ++ G+E+ R
Sbjct: 69 ELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIER 120
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 68.1 bits (159), Expect = 1e-10
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L P L++ V A GF P+ IQE ALP LA Q+++ + +GTGKTAAFVL +
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAG--QDILGLAATGTGKTAAFVLPL 114
Query: 346 LSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 456
L R+ +S + + L ++PT EL Q E +A+FC
Sbjct: 115 LHRLLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFC 155
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/91 (41%), Positives = 55/91 (60%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S +F LHL P L + GF P+ IQ A+P LA +++I + +GTGKTAAF+
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAG--KDVIGTAATGTGKTAAFL 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
L ++ R+ + K + L L+PT ELA+Q GE
Sbjct: 60 LPLIDRL-AGKPGTRALVLAPTRELALQIGE 89
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 68.1 bits (159), Expect = 1e-10
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 100 VESKLDIEIQR--KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLA 273
+E+ LD I D L + F + L LLK +Y GF PS IQ++A+P +L
Sbjct: 28 IETGLDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILR 87
Query: 274 DPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 447
N++ QS+SGTGKT A+ +L + QV+ ++PT EL+ Q EV + +A
Sbjct: 88 G--HNVVVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLA 142
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/100 (39%), Positives = 62/100 (62%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L +L + MGF +P+ IQ A+P LL ++ + ++Q+GTGKTAAF L +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTAAFSLPLL 85
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK 468
++++ ++ PQ + ++PT ELAIQ VAA++ IK
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQ---VAAEIKNLGQNIK 122
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL-A 342
TFE L L P LL + ++ P+ IQ A+P +L ++++A + +GTGKTAAFVL A
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLS--KDVLAGAATGTGKTAAFVLPA 59
Query: 343 MLSRVDSNK--NYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
+ +D + P+VL L+PT ELA Q +V ++ CP
Sbjct: 60 LQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP 100
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE L +L + G+ P++IQ+ LP L+ +++IAQ+Q+GTGKTAAF + +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTD-KDLIAQAQTGTGKTAAFGIPLL 78
Query: 349 SRVDSNKN-YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
R+D N + + + ++PT ELA+Q E K K +K+ G+ L + K
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFE-ELKSLKGTKRVKITTLYGGQSLEKQFK 133
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/102 (36%), Positives = 63/102 (61%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ L LK +LL G+ +G+ PS IQE +P LA ++++A+S++GTGKT +F++ +L
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIP--LAINNKDILARSKNGTGKTLSFLIPIL 74
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+ S + + L PT ELA+Q + K++K+ I L+
Sbjct: 75 QNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQ 116
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +1
Query: 130 RKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 303
+KD S+ + F LKP LL+ + GF PS++Q +P + +++ Q+
Sbjct: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
Query: 304 QSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
+SG GKTA FVLA L +++ VL + T ELA Q + + +K+ P +K+
Sbjct: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
Query: 484 RGEELPRGSKI 516
G + + ++
Sbjct: 150 GGLSIKKDEEV 160
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = +1
Query: 121 EIQRKDPNSPLYSVKT--FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
E +KD S+ + F LKP +L+ + GF PS++Q +P + +++
Sbjct: 25 EAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDIL 82
Query: 295 AQSQSGTGKTAAFVLAMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
Q++SG GKTA FVLA L +++ S+ N VL + T ELA Q + + +K+ P +K+
Sbjct: 83 CQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKV 142
>UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07723 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 67.3 bits (157), Expect = 2e-10
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V +F L L LLK + M + P+ IQ +P L ++ A +++G+GKT AF+L
Sbjct: 59 VSSFMELKLAKPLLKSLTEMSLDKPTPIQCACIPVALLH--HDICACARTGSGKTLAFLL 116
Query: 340 AMLSRV-----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+L R+ D N + L +SPT ELA+Q VA K+ K+CP+++++
Sbjct: 117 PILERLAKKPSDFNHAITRALVISPTRELAVQIFNVAEKLVKYCPKLRIQ 166
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/95 (38%), Positives = 55/95 (57%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE L +K N+L + MGF IQE A+P LL ++++ Q+ +GTGKT A+ ++ML
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTG--RDVVGQAHTGTGKTGAYSISML 61
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ Q L ++PT ELA+Q E K AK+
Sbjct: 62 QEIKEGGGI-QGLIVAPTRELAVQITEEVKKFAKY 95
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 66.9 bits (156), Expect = 3e-10
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF + LL + +MGFN P+ IQ A+P ++++ +++A +Q+GTGKTAA++L +
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSN--SDLVACAQTGTGKTAAYMLPI 59
Query: 346 LSR-VDSNKNYPQVLCLSPTYELAIQ 420
L + ++SN + L L PT ELAIQ
Sbjct: 60 LHKIIESNTDSLDTLVLVPTRELAIQ 85
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 66.9 bits (156), Expect = 3e-10
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE+ L P + K + GFN P+ IQ ++P +LA ++++A +Q+GTGKTAAFV+ +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAG--EDVLAIAQTGTGKTAAFVIPVL 60
Query: 349 SRVDSNK--NYPQVLCL--SPTYELAIQTGEVAAKMAKF 453
+ + + K + + CL +PT ELA+Q EV K+ +
Sbjct: 61 NTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAY 99
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 66.9 bits (156), Expect = 3e-10
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +1
Query: 127 QRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 306
++ N L S K+F+A L +L+G+ ++GF P+ IQ +P L ++++ +
Sbjct: 293 EKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG--KDVVGGAV 350
Query: 307 SGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 453
+G+GKT AF++ +L R + + P +V L PT ELA+Q VA K+A F
Sbjct: 351 TGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATF 402
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 66.9 bits (156), Expect = 3e-10
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F+ ++L LLK + AMGF P+ IQ+ +P L +++ A + +GTGKTAAF L +
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFALPV 276
Query: 346 LSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKFC 456
L R + + P +VL L PT EL IQ V ++A+FC
Sbjct: 277 LERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFC 316
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 66.5 bits (155), Expect = 3e-10
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
+TF KP L+ V + F P+ IQ+ P + ++I QSQ+G+GKT A++L
Sbjct: 4 QTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGV--SVIGQSQTGSGKTHAYLLP 61
Query: 343 MLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 462
L+R++ + Q++ +PT ELA Q E K+ KFC E
Sbjct: 62 TLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAE 101
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 66.5 bits (155), Expect = 3e-10
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = +1
Query: 187 KPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSN 366
K + K + AMG + P+KIQ+ A+P LL +N+I + +GTGKT AF+L +L +D
Sbjct: 9 KEFIAKTLKAMGIHEPTKIQKEAIPPLLKQ--KNLIGVAPTGTGKTLAFLLPILQNLDFA 66
Query: 367 KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+N Q + + PT ELA Q V A K I++K
Sbjct: 67 QNLIQAVIIVPTRELANQIKSVLANFVKTNKAIRIK 102
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 66.5 bits (155), Expect = 3e-10
Identities = 37/119 (31%), Positives = 66/119 (55%)
Frame = +1
Query: 142 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 321
+ P S +F L L ++L + +G+ + IQ+ ALP +LA+ +++IA++++G+GK
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAE--KDLIAKAKTGSGK 86
Query: 322 TAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
TAAF + +L ++ Q L L PT ELA K+A+F +K+ G+ +
Sbjct: 87 TAAFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPI 145
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 66.5 bits (155), Expect = 3e-10
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TFE+L L P L++ + A+G+ P+ IQ ALP LL ++++ + +GTGKTAAF L +
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEG--KDLLGIAATGTGKTAAFSLPL 94
Query: 346 LSRVDSNKNYP---QVLCLSPTYELAIQTGE 429
L R+ + P L L PT ELA+Q E
Sbjct: 95 LQRITPGAHAPFTASALVLVPTRELAMQVAE 125
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 66.5 bits (155), Expect = 3e-10
Identities = 33/80 (41%), Positives = 54/80 (67%)
Frame = +1
Query: 193 NLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKN 372
+L+K +Y GF PS +Q+ ++P L+ Q++ +Q+G+GKTAAF +++LS V+ K+
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQG--QSISVNAQTGSGKTAAFGISLLSLVNPQKS 70
Query: 373 YPQVLCLSPTYELAIQTGEV 432
Q + +SPT EL+ QT EV
Sbjct: 71 ICQAVIISPTKELSNQTLEV 90
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 66.5 bits (155), Expect = 3e-10
Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF++ P LL+ + +G++ P+ IQ P++LA ++++A +++G+GKTA FVL M
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAG--RDVVAMARTGSGKTAGFVLPM 62
Query: 346 LSRVDSNKNY---PQVLCLSPTYELAIQTGEVAAKMA 447
+ R+ + + + + LSPT ELA+QT V K+A
Sbjct: 63 IERLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLA 99
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 66.5 bits (155), Expect = 3e-10
Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
+ AL++ P+L++ + F P+ IQ A+P L+ PP++++ +++G+GKT A+++ +L
Sbjct: 29 WRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLL 88
Query: 349 SRVDSNKN--YPQVLCLSPTYELAIQTGEVAAKMAK 450
R S + P+ L L P+ ELA+Q V +A+
Sbjct: 89 QRTGSTHHGQGPRALILCPSRELAVQIYTVGKDLAR 124
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 66.1 bits (154), Expect = 5e-10
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
KTF+ L L P +LK V +G+ P++IQE ++P L +++I +Q+G+GKTA+F+L
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVAL--QKKDIIGIAQTGSGKTASFLLP 66
Query: 343 MLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 510
M+ + + N+ + + + PT ELA Q EV +M K P + V G ++ + S
Sbjct: 67 MVQHLLNVKEKNRGF-YCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQS 125
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 66.1 bits (154), Expect = 5e-10
Identities = 36/108 (33%), Positives = 60/108 (55%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L P LL + +G+ + +Q +LP +L + + + ++ +G+GKT AF L +L
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNT--DAVVRADTGSGKTTAFALTLL 80
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 492
+++++ PQ L L PT ELA Q + K+AK IK+ GE
Sbjct: 81 AKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGE 128
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ L L ++K + MGF + IQ +P L + +++I Q+Q+GTGKTAAF + +
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQN--KDVIGQAQTGTGKTAAFGIPI 60
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 444
+ +V+ + Q L ++PT ELAIQ E K+
Sbjct: 61 VEKVNVKNSAVQALVVAPTRELAIQVSEELYKI 93
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 66.1 bits (154), Expect = 5e-10
Identities = 37/99 (37%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F++++L +LKG+ +GF P++IQ+ +P L ++++ + +G+GKTAAF++ +
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG--KDIVGAAVTGSGKTAAFIVPI 317
Query: 346 LSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 453
L R + K P +VL L PT ELA+Q VA K+A F
Sbjct: 318 LERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASF 356
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 66.1 bits (154), Expect = 5e-10
Identities = 29/95 (30%), Positives = 59/95 (62%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ + ++L+ + +G+ P+K+Q++ +P L ++++ +SQ+G+GKTA+F + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALER--KDLVVKSQTGSGKTASFGIPLC 61
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ ++N PQ L L+PT ELA+Q E + +F
Sbjct: 62 ELANWDENKPQALILTPTRELAVQVKEDITNIGRF 96
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 65.7 bits (153), Expect = 6e-10
Identities = 31/104 (29%), Positives = 59/104 (56%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+KTF + +++KG+ +GF+ + +QE +P +L + +++ +Q+GTGKTAAF +
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVL-NRQTDLVGLAQTGTGKTAAFGI 59
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
++ D+ Q L L PT EL +Q M ++ ++K+
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKI 103
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 65.7 bits (153), Expect = 6e-10
Identities = 33/95 (34%), Positives = 58/95 (61%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ +L +L+K + MGF + IQ +P L++ +++I Q+Q+GTGKTAAF + +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSN--KDVIGQAQTGTGKTAAFGIPL 61
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ +++ Q + ++PT ELAIQ E K+ +
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ 96
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 65.7 bits (153), Expect = 6e-10
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
++ FE L P LLK + G++ P+ IQ A+P + + +++ + +GTGKTAAF+
Sbjct: 2 NLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEE--SDVLGSAPTGTGKTAAFL 59
Query: 337 LAMLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L L + P++L L+PT ELA+Q E A ++A+F
Sbjct: 60 LPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQF 102
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 65.7 bits (153), Expect = 6e-10
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L LL+ ++ GF AP+ IQ +P LL ++++ +++G+GKTAAFV+ M+
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEG--RDVVGMARTGSGKTAAFVIPMI 128
Query: 349 SRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ S + + L LSP ELA+QT +V +K
Sbjct: 129 EHLKSTLANSNTRALILSPNRELALQTVKVVKDFSK 164
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 65.7 bits (153), Expect = 6e-10
Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+A+ L P+LL+ + GF P+ IQ ++P +L ++++ +++G+GKTAAFV+ M+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLIL--DRRDVVGMARTGSGKTAAFVIPMI 149
Query: 349 SRV--DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
R+ S + + L +SP+ ELA+QT +V + K ++K V G+ L
Sbjct: 150 ERLRAHSARVGARALIMSPSRELALQTLKVVKEFGK-GTDLKTVLLVGGDSL 200
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 65.3 bits (152), Expect = 8e-10
Identities = 38/108 (35%), Positives = 60/108 (55%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF + L +L G+ GF+ PS IQ ++P L ++I +++SGTGKTA F +
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIP--LGRCGFDLIVRAKSGTGKTAVFGIIA 82
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 489
L +D + QV+ L+PT E+AIQ EV A + +K++ + G
Sbjct: 83 LEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGG 130
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 65.3 bits (152), Expect = 8e-10
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ L L +L + FN ++IQ A+P L +N+ +S +GTGKTA+FVL +
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEG--KNIFGKSSTGTGKTASFVLPI 59
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQ 420
L +++ NK Q + ++PT ELA+Q
Sbjct: 60 LEKIEPNKRRVQAVIMAPTRELAMQ 84
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 65.3 bits (152), Expect = 8e-10
Identities = 40/118 (33%), Positives = 59/118 (50%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ F + L K + M F PS IQ +P +L ++ IA +Q+GTGKTAAF L
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQG--RDAIALAQTGTGKTAAFAL 62
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
+L + + Q L L+PT ELAIQ E ++K+ + + G+E R K
Sbjct: 63 PILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK 120
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 65.3 bits (152), Expect = 8e-10
Identities = 35/110 (31%), Positives = 58/110 (52%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ L LK +L +Y G+ P+ IQ +L +L Q+ + ++++GTGKTAAF + L
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQG--QDALVRAKTGTGKTAAFAIPAL 64
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
+ + +PQVL L+P EL Q + K+ K ++ G +L
Sbjct: 65 QHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL 114
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 65.3 bits (152), Expect = 8e-10
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
KTFE L L+P+L++ + MG P+ IQE A+P +L ++++A++++G+GKT A++L
Sbjct: 24 KTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEG--KDVVARAKTGSGKTFAYLLP 81
Query: 343 MLSRV-----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 456
+L ++ NK P L PT EL Q + + C
Sbjct: 82 LLQKLFCESESRNKLAPSAFVLVPTRELCQQVYSEVLSLIELC 124
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 65.3 bits (152), Expect = 8e-10
Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE++ L + +GV G+ P+ IQ A+P +LA ++ A +++G+GKTAAF++ M+
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG--HDIAAMARTGSGKTAAFLVPMI 108
Query: 349 SRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
R+ D+ + L LSPT +LA QT + A ++ KF ++K+ V G+ +
Sbjct: 109 QRLRRHDAGAGI-RALILSPTRDLATQTLKFAQQLGKF-TDLKISLIVGGDSM 159
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 65.3 bits (152), Expect = 8e-10
Identities = 36/112 (32%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+A+ L NLL+ + GF+ P+ IQ +P +L ++++ +++G+GKTAAFV+ M+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLER--RDVVGMARTGSGKTAAFVIPMI 145
Query: 349 SRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
R+ ++ + + +SP+ ELA+QT +V ++ K ++K V G+ L
Sbjct: 146 ERLKAHSARVGARAIIMSPSRELALQTLKVVKELGK-GTDLKTVLLVGGDSL 196
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L + KGV G+ P+ IQ +P +L ++++A +++G+GKTA F++ M
Sbjct: 152 FQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDG--KDVVAMARTGSGKTACFLIPMF 209
Query: 349 SRVDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
++ ++ + L LSPT ELA+QTG+ ++ KF +K+ + G+ +
Sbjct: 210 EKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKF-TGLKMALILGGDRM 260
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L L +L V A G+ P+ IQE A+P +LA ++++ +Q+GTGKTAAFVL M
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLA--RKDVLGIAQTGTGKTAAFVLPM 59
Query: 346 LSRVDSNK---NYPQVLCLSPTYELAIQTGE 429
L+ ++ + P+ L L PT ELA Q E
Sbjct: 60 LTILEKGRARARMPRTLILEPTRELAAQVKE 90
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Frame = +1
Query: 184 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV-D 360
L P L+ + G+ AP+ IQ A+P +L ++++ +Q+G+GKTAAF L ML ++ +
Sbjct: 12 LLPAFLRAIGDKGYRAPTAIQSQAIPAILLG--RDVVGSAQTGSGKTAAFALPMLQQLAN 69
Query: 361 SNKNYPQV---LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
+ P+ L L PT ELA Q GE A AK+ P+ ++K AV
Sbjct: 70 APTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQ-RVKVAV 112
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+ LKP +L+ ++ G P+ IQ ALP LA +++I Q+++GTGKT AF L +
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALP--LALEGKDLIGQARTGTGKTLAFALPIA 60
Query: 349 SRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
R+ ++ P+ L L+PT ELA+Q VA+++ P +K+
Sbjct: 61 ERLAPSQERGRKPRALVLTPTRELALQ---VASELTAVAPHLKV 101
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 64.9 bits (151), Expect = 1e-09
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = +1
Query: 121 EIQRKDPNSPLYSVK------TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPP 282
E R +P P+ V+ F L L L V MG+ P+ IQ A+P +LA
Sbjct: 113 EHPRSEPIKPVTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAG-- 170
Query: 283 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+++ +Q+GTGKTAAF L +L ++ +++ + L L PT ELA+Q E K +K+
Sbjct: 171 RDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY 227
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
K F ++ L P + + ++ M F + +QE LP L Q++ A++Q+GTGKTAAF+++
Sbjct: 115 KAFLSMDLCPAVQRAIHEMDFKFCTPVQEGVLPISLKG--QDVAAKAQTGTGKTAAFLIS 172
Query: 343 MLSRVDSN------KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 504
M + +N P+ L L+PT ELA+Q G A + K+C +I+++ G + +
Sbjct: 173 MYNHFVNNPQTEVKAGTPRALILAPTRELALQIGADAEGLGKYC-DIRVETFFGGMDFDK 231
Query: 505 GSKI 516
++I
Sbjct: 232 QAQI 235
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/121 (31%), Positives = 70/121 (57%)
Frame = +1
Query: 106 SKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQ 285
S DIE + + +S + + H+ ++++ V +G+ P+++Q ALP L + +
Sbjct: 48 STSDIEARTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSG--R 105
Query: 286 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
+ + +Q+G+GKT A++L MLS +DS ++ Q L + PT EL +Q +VA +A E+
Sbjct: 106 DCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSEL 165
Query: 466 K 468
K
Sbjct: 166 K 166
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L NLLK + GFN P+ IQ ++P +L +++ +++G+GKT AFV+ M+
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMIL--DGHDIVGMARTGSGKTGAFVIPMI 289
Query: 349 SRVDSNKNYPQV--LCLSPTYELAIQTGEV 432
++ + V + LSPT ELAIQT +V
Sbjct: 290 QKLGDHSTTVGVRAVILSPTRELAIQTFKV 319
>UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 528
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 187 KPNLLKGVYAMG-FNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 363
K + ++ +Y G PS IQ A+P LL +PP++++AQ+ +G GKT AF+L M RVD
Sbjct: 66 KIDAIQSIYMKGNIQHPSYIQTRAIPYLLENPPKSILAQASTGEGKTLAFILPMYLRVDL 125
Query: 364 NKNYPQVLCLSPTYELAIQ 420
Q +C+ PT EL Q
Sbjct: 126 ENPNIQAICVCPTRELIQQ 144
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 64.9 bits (151), Expect = 1e-09
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
D E ++K + + + KTFE+L L N K + MGF ++IQ A+P L+ ++++
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMG--EDVL 195
Query: 295 AQSQSGTGKTAAFVL---AMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+++G+GKT AF++ +L RV + +N VL + PT ELAIQ+ VA ++ K+
Sbjct: 196 GAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKY 252
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L N+L + GF P+ IQ +P L D N++AQ+++G+GKTA+F + ++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDE-YNIVAQARTGSGKTASFAIPLI 66
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGE 429
V+ N N + + L+PT ELAIQ +
Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVAD 92
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
+ F +L L +LKG+ ++G+ PS IQ +P L +++IA + +G+GKTAAF++
Sbjct: 231 ENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLG--KDIIAGAVTGSGKTAAFMIP 288
Query: 343 MLSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
++ R+ + +V+ L PT ELAIQ +V ++A+F I AV G L
Sbjct: 289 IIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNL 343
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 64.5 bits (150), Expect = 1e-09
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F+ L L P + + V GF PS IQ +P L +++I Q+++GTGKTAAF + +
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNG--KDVIGQARTGTGKTAAFSIPI 102
Query: 346 LSRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKFCP 459
L ++DS ++ PQ + + PT ELA Q A ++A+ P
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVP 142
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 64.5 bits (150), Expect = 1e-09
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAF---V 336
TFE L+L +LK + G+ +P+ IQE ++P LL ++++ +Q+GTGKTAAF +
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQG--KDLLGCAQTGTGKTAAFSIPI 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
L L + D K + L L+PT ELAIQ GE
Sbjct: 60 LQKLYKTDHRKGI-KALVLTPTRELAIQIGE 89
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 64.5 bits (150), Expect = 1e-09
Identities = 36/111 (32%), Positives = 63/111 (56%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L LL+ + ++PS+IQ+ A+P +L + +N++ +Q+GTGKTAAF L +
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVIL-NSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
L +++ + QVL L PT EL Q + +++ I + G+++
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKI 111
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/91 (38%), Positives = 56/91 (61%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S KTFE L L L+ +GF APS IQ +P +L +++IA +++G+GKTA+F
Sbjct: 2 SDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKG--RDIIASAKTGSGKTASFA 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
+ +L+++ + + L+PT ELA+Q GE
Sbjct: 60 IPILNQLSEDPYGVFAVILTPTRELAVQIGE 90
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F++L L P++L+ V G+ P+ IQ+ A+P +L ++++A +Q+GTGKTA F L +
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG--RDLMASAQTGTGKTAGFTLPL 59
Query: 346 LSRVDSNKNYP------QVLCLSPTYELAIQTGEVAAKMAKF 453
L + + + + + L L+PT ELA Q GE +K+
Sbjct: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKY 101
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 178 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 357
+ + NL K + M F P++IQE A+P +L +++I +S++G+GKTAA++L +L+ V
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTG--KDVIIRSKTGSGKTAAYLLPVLNSV 58
Query: 358 DSNKNYP-QVLCLSPTYELAIQTGEVAAKMAK 450
+ K + + + PT ELA+QT VA+++ K
Sbjct: 59 EKLKGKSVKAIIILPTRELALQTHRVASRLGK 90
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/99 (31%), Positives = 57/99 (57%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S K+F L + + + +G+ P+++Q +P L ++++ +SQ+G+GKTA+F
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQK--KDLVVKSQTGSGKTASFG 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ + V+ +N PQ L L+PT ELA+Q E + +F
Sbjct: 60 IPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF 98
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +LHL P LLK + +GF P+ IQ A+P ++ ++++A + +G+GKTAAF+L +L
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSG--RDVMASAVTGSGKTAAFLLPIL 60
Query: 349 SR-VDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
+ +D + + L ++PT ELA Q E +A P
Sbjct: 61 HQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTP 98
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/97 (29%), Positives = 57/97 (58%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ TFE L + L+ G+ +P+++Q + ++ + ++++ SQ+GTGKT A++L
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQN--KDLLINSQTGTGKTLAYLL 58
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ ++D++K Q L L+PT+EL +Q +AK
Sbjct: 59 PIFEKIDTSKRETQALILAPTHELVMQITNQVELLAK 95
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 64.1 bits (149), Expect = 2e-09
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L L P +LK + +NAP IQE A+P +L ++++ +Q+G+GKTA+FVL +
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKG--KDILGIAQTGSGKTASFVLPI 67
Query: 346 LSRVDS---NKN-YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 489
L + + KN + L L PT ELA+Q G+V + P AV G
Sbjct: 68 LQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYG 119
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Frame = +1
Query: 163 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 342
KT++ L L LLK V M + P+ IQ A+P L ++++A S +G+GKTAAF++
Sbjct: 190 KTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQG--KDLLASSLTGSGKTAAFLIP 247
Query: 343 MLSRVDSNK--NYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+L + + NY + L ++PT ELA Q EV K+ K+
Sbjct: 248 ILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKY 286
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +1
Query: 127 QRKDPNSPLYSVKT-FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 303
Q + +S ++++ T F L L L+K + G+ P+ +Q +P ++ ++++A S
Sbjct: 103 QEQQLDSKIFAIDTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNG--KDVLASS 160
Query: 304 QSGTGKTAAFVLAMLSRVDSNKN--YPQVLCLSPTYELAIQTGEVAAKMAKF 453
+G+GKTAAF+L ++ R + KN Y + L + PT ELA+Q E+ K+ K+
Sbjct: 161 CTGSGKTAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQCFEMFEKLNKY 212
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 64.1 bits (149), Expect = 2e-09
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Frame = +1
Query: 28 SDDVPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKG 207
S+D D + D L+ K V++ K +S L + F+ L P LK
Sbjct: 338 SEDSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTR-FDQFPLSPLSLKA 396
Query: 208 VYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV--------DS 363
+ GF + +QE LP +L ++++A++++GTGKT AF+L + V DS
Sbjct: 397 IKDAGFETMTVVQEATLPIILQG--KDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDS 454
Query: 364 NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP 501
+ VL + PT ELA Q A + K+ P I ++ + G +LP
Sbjct: 455 RQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLP 500
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 64.1 bits (149), Expect = 2e-09
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ +F+ + L +L+G+ ++GF P+ IQ +P L ++++ + +G+GKTAAFV+
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMG--KDVVGGAVTGSGKTAAFVV 332
Query: 340 AMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
+L R + K P +V+ L+PT ELAIQ VA K+A +IK AV G L
Sbjct: 333 PILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASH-TDIKFCLAVGGLSL 387
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/94 (34%), Positives = 62/94 (65%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
+E+L L P LLK + +G++ PS +Q ++P +L +N++ +S++GTGKTA++++ ML
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGG--KNLLVRSKNGTGKTASYIVPML 167
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ ++S++ Q + L P ELA+Q +M++
Sbjct: 168 NMINSSELSIQGIILVPIRELALQISRNVKRMSE 201
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L+L ++K + MGF S+IQ LP L ++I Q+Q+GTGKTAAF++AM+
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLG--YDIIGQAQTGTGKTAAFLIAMI 130
Query: 349 S-------RVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 456
S N+ + L ++PT ELAIQ + A K+ C
Sbjct: 131 SDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNC 173
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/97 (30%), Positives = 60/97 (61%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+K FE +L+ L++ + G++ P+++Q A+P LA +++ +S++G+GKTAA+++
Sbjct: 1 MKGFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAG--SDLVVRSKTGSGKTAAYLI 58
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+++ K + L L PT ELA+Q +V+ + K
Sbjct: 59 PIINNTAKEKGI-RALILLPTRELAVQVAKVSEALGK 94
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 63.7 bits (148), Expect = 2e-09
Identities = 35/118 (29%), Positives = 59/118 (50%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ +F L L P ++K + +G+ P+ IQ+ +P +LA ++ Q+ +GTGKTAAF +
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAG--NDVAGQAYTGTGKTAAFGI 60
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
+ Q + L P+ ELA+Q G K+A I + G+ + R K
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIK 118
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 63.3 bits (147), Expect = 3e-09
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ ++L LLK + AM F P+ IQ+ +P L +++ A + +GTGKTAAF+L +
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFMLPV 239
Query: 346 LSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 489
L R + + P +VL L PT EL IQ V ++A+F E+ AV G
Sbjct: 240 LERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQF-TEVTTCLAVGG 289
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF+ + L+ +LL+G+YA GF PS IQ+ A+ ++ +++IAQSQSGTGKTA F +++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSVSV 96
Query: 346 LSRVD 360
L +D
Sbjct: 97 LQCLD 101
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 63.3 bits (147), Expect = 3e-09
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +1
Query: 199 LKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP 378
L+ + G P++IQ+ +P L QN+I SQ+GTGKT A++L ML++ +
Sbjct: 14 LEALTNQGITEPTEIQQQVIPEALDG--QNLIVHSQTGTGKTLAYLLPMLTKTEELPEQT 71
Query: 379 QVLCLSPTYELAIQTGEVAAKM 444
Q L L+PT ELA+Q EVA ++
Sbjct: 72 QALILAPTQELAMQIVEVAKQL 93
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 63.3 bits (147), Expect = 3e-09
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L L LL+ V +G+ P+ +Q A+P++L +++IA +Q+GTGKTA+FVL M
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLM--MRDLIAVAQTGTGKTASFVLPM 59
Query: 346 LSRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+ + + P+ L L PT ELA Q E K K+
Sbjct: 60 IDILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKY 98
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ TFE +L +L K V +GF P+ IQE + +++ ++M+ +Q+GTGKT A++L
Sbjct: 1 MSTFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSG--RDMMGIAQTGTGKTFAYLL 58
Query: 340 AMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
+L ++ N P+++ L PT EL +Q E K+ K+
Sbjct: 59 PLLKLYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKY 97
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TFEAL L P +L+ + +G +P+ IQ+ ++P ++ ++++ +Q+GTGKT F+L +
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDG--RDLLGIAQTGTGKTGGFLLPV 59
Query: 346 LSRVDSNKNY---PQVLCLSPTYELAIQTGEVAAKMAKF 453
L ++ + + + L LSPT ELA Q + A AK+
Sbjct: 60 LHKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKY 98
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 63.3 bits (147), Expect = 3e-09
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Frame = +1
Query: 97 LVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLAD 276
L+ KLDI +Q + P V TF + L P LL + G++ P+ IQ A+P L
Sbjct: 89 LLRRKLDIHVQGQGSAVPP-PVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG 147
Query: 277 PPQNMIAQSQSGTGKTAAFVLAMLSRV---------DSNKNYPQVLCLSPTYELAIQTGE 429
++++A + +G+GKTA+F++ ++SR D +N P + L+PT EL +Q +
Sbjct: 148 --KSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN-PLAMVLAPTRELCVQVED 204
Query: 430 VAAKMAKFCPEIKLKYAVRGEEL 498
A + K P K V G+ +
Sbjct: 205 QAKMLGKGLP-FKTALVVGGDPM 226
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 63.3 bits (147), Expect = 3e-09
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Frame = +1
Query: 103 ESKLDIEIQRKDPNSPLYS--VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLAD 276
E+K+ ++ N P + +F+ + L +L+G+ ++GF P+ IQ +P L
Sbjct: 271 EAKMKEFFAPEEENQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMG 330
Query: 277 PPQNMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMA 447
++++ + +G+GKTAAFV+ +L R + K P +V+ L+PT ELAIQ VA K+A
Sbjct: 331 --KDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLA 388
Query: 448 KFCPEIKLKYAVRGEEL 498
+IK AV G L
Sbjct: 389 SH-TDIKFCLAVGGLSL 404
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 63.3 bits (147), Expect = 3e-09
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Frame = +1
Query: 130 RKDPNSPLYSVKT---FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 300
RK+ N+P S K F+A+ L LLK + GF P+ IQ A+P +L +++
Sbjct: 64 RKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQG--DDVVGM 121
Query: 301 SQSGTGKTAAFVLAMLSRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+++G+GKTAAFV+ M+ R+ ++ K + + +SP+ ELA+QT +V + +
Sbjct: 122 ARTGSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGR 173
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 62.9 bits (146), Expect = 4e-09
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L + KGV G+ P+ IQ +P +L ++++A +++G+GKTAAF++ M
Sbjct: 39 FQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDG--KDVVAMARTGSGKTAAFLIPMF 96
Query: 349 SRVDS--NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
R+ + + + L LSPT ELA+QT + ++ KF KLK A+
Sbjct: 97 ERLKAPQAQTGARALILSPTRELALQTMKFTKELGKF---TKLKTAL 140
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = +1
Query: 184 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 363
++P L + GF ++IQ+ A+PT+L Q++IA+S +GTGKT A++L +L +++
Sbjct: 5 MQPFLQQAWEKAGFKELTEIQKQAIPTILEG--QDVIAESPTGTGKTLAYLLPLLHKINP 62
Query: 364 NKNYPQVLCLSPTYELAIQTGEVAAK 441
PQV+ L+PT EL +Q E K
Sbjct: 63 EVKQPQVVVLAPTRELVMQIHEEVQK 88
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 62.9 bits (146), Expect = 4e-09
Identities = 30/92 (32%), Positives = 56/92 (60%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE + P L +G+ + F P+K+QE +P +L+D +++ Q+ +G+GKT A+++ +
Sbjct: 5 FEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSD--LSVVVQAATGSGKTHAYLVPIF 62
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 444
+ +D +Y Q + P+ ELA Q +VA K+
Sbjct: 63 NEIDEAAHYVQAIVTLPSRELADQLYQVARKL 94
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 62.9 bits (146), Expect = 4e-09
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+FE ++L +LK G++ P+ IQ+ +P L +++ A + +GTGKTAAFVL +
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG--KDICACAATGTGKTAAFVLPI 206
Query: 346 LSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
L R+ + +VL L PT ELAIQ +V K++ F
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTF 245
>UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_435_34658_36088 - Giardia lamblia
ATCC 50803
Length = 476
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/114 (28%), Positives = 65/114 (57%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
++E L + ++++ ++A GF+ P+K Q A+ +L D ++ + ++ +GTGKT +F+
Sbjct: 25 SWEKLSVPESIMELLHASGFHMPTKTQVAAIKPILCDRKRSGLLEAPTGTGKTISFLTVA 84
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG 507
+S + +K+ PQ + ++PT L Q VA +AK I++ +EL G
Sbjct: 85 MSHITPDKSLPQAVIIAPTKILCRQIYGVAENLAK-GSNIRVSLCFAKDELNEG 137
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 62.9 bits (146), Expect = 4e-09
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L+ +L+ + + GF +PS +Q A+P L +++I Q++SG GKTA FVL++L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEH--KDVICQAKSGKGKTAVFVLSLL 187
Query: 349 SRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+D + + Q L L T+ELA+Q + + A P+IK K
Sbjct: 188 HMIDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPDIKDK 231
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 62.9 bits (146), Expect = 4e-09
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ TFEAL L+ LK M + P+ IQ+ +P +LAD +++A S++G+GKTA+F+L
Sbjct: 1 MSTFEAL-LEGPALKVATTM-YRKPTPIQKEVIPVVLAD--HDVVAMSKTGSGKTASFLL 56
Query: 340 AMLSRVDSNKNYPQVLCL--SPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP 501
++ +++ + CL +P+ ELA+QTG K A +K + GE LP
Sbjct: 57 PIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQKYAS-QTNLKCAQIIGGEALP 111
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 62.9 bits (146), Expect = 4e-09
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +1
Query: 184 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 363
L P L + +G+ + +Q ALP +LA +++ Q+++G+GKTAAF L +L ++D+
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAG--KDVRVQAKTGSGKTAAFGLGLLQQIDA 67
Query: 364 NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
+ Q L L PT ELA Q ++A+F P K+
Sbjct: 68 SLFQTQALVLCPTRELADQVAGELRRLARFLPNTKI 103
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 62.9 bits (146), Expect = 4e-09
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
V +F L L+P LL+G+ + +P+ +Q A+P LA ++++A+S +GTGKT A++L
Sbjct: 46 VASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIP--LALQGRDILARSGTGTGKTGAYLL 103
Query: 340 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
+L K L L PT ELA+Q +VA ++ C + + G+E
Sbjct: 104 PILHNTLLRKGKTS-LILVPTKELALQITKVAKALSAHCGQAVRIQNIAGKE 154
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 62.9 bits (146), Expect = 4e-09
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +1
Query: 103 ESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPP 282
++++ + P+S S +F L L P LL+ V F P+ +Q A+P LA
Sbjct: 23 DTEVSSAVANATPSSEAASSSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIP--LALEG 80
Query: 283 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK------NYPQVLCLSPTYELAIQTGEVAAKM 444
++++A++++G+GKTAA+VL +L V K Y L L PT EL +Q + +
Sbjct: 81 RDVLAKAKTGSGKTAAYVLPILQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERF 140
Query: 445 AKFC 456
+ FC
Sbjct: 141 SAFC 144
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 62.5 bits (145), Expect = 6e-09
Identities = 40/128 (31%), Positives = 68/128 (53%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
D++ + + + L +F +L L ++ +G+ GF PS IQ A+P L ++I
Sbjct: 8 DLDAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIP--LGRCGFDLI 65
Query: 295 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
+S+SGTGKT F L V++ K++ QVL L PT E+A+Q +V + +K++
Sbjct: 66 VKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIE 125
Query: 475 YAVRGEEL 498
+ G L
Sbjct: 126 SFIGGRPL 133
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 62.5 bits (145), Expect = 6e-09
Identities = 34/114 (29%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F+ +P + + + GF P+++QE +P + +++I QSQ+G+GKT F+L +
Sbjct: 3 SFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKG--KSVIGQSQTGSGKTHTFLLPL 60
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLKYAVRGEELPR 504
+ +V + Q++ +P+ ELA Q + A ++A+F PEI++ V G + R
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQR 114
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 62.5 bits (145), Expect = 6e-09
Identities = 35/98 (35%), Positives = 60/98 (61%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S + F ++ LK +LL+ + GF P+ IQ ++P +A +++ Q+Q+GTGKTA+F
Sbjct: 2 SFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAG--LDLMGQAQTGTGKTASFG 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+ +L+RV + Q L L PT ELA+Q E + +++
Sbjct: 60 IPILNRVIKGEGL-QALVLCPTRELAVQVTEEISSLSR 96
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 62.5 bits (145), Expect = 6e-09
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L LL+ + + P+ IQ ++P +L +++ +Q+GTGKTAAFVL +L
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEG--HDLVGIAQTGTGKTAAFVLPIL 116
Query: 349 SRVDSNKNYP-----QVLCLSPTYELAIQTGEVAAKMAKF 453
R+ +N+ P + L L+PT ELA Q + A KF
Sbjct: 117 HRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKF 156
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 62.5 bits (145), Expect = 6e-09
Identities = 39/120 (32%), Positives = 63/120 (52%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
+V+T + L + P + K + + G + S IQ +LP L +++I Q+Q+G+GKT FV
Sbjct: 2 TVETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQG--KDVIGQAQTGSGKTLCFV 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 516
+ L +++ N Q + L PT ELA Q + AK IK+ G+ P G +I
Sbjct: 60 IPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQ--PMGPQI 117
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/112 (29%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+A+ L +LK + MG+ P+ IQ +P +L ++++A +++G+GKT F++ +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEG--RDVVAMAKTGSGKTGCFLIPLF 97
Query: 349 SRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
++ K+ + L L+PT ELAIQT + ++ KF ++K + G+ +
Sbjct: 98 EKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKF-TDLKTILVLGGDSM 148
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 62.5 bits (145), Expect = 6e-09
Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Frame = +1
Query: 136 DPNSPLYS-VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 312
D +PL + V++FE L L ++++ ++ M F P+ +Q +P L +++ A + +G
Sbjct: 6 DTETPLPNDVESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQG--RDVCASAVTG 63
Query: 313 TGKTAAFVLAMLSRVDSNKN---YPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
+GKTAAF++ + R+ +K+ + + LSPT ELA QT V +++ +F P
Sbjct: 64 SGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTP 115
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/101 (32%), Positives = 53/101 (52%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F LKP LL+ + GF PS++Q +P + ++I Q++SG GKTA FVL+ L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTL 105
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 471
+++ + L L T ELA Q + + + P+ K+
Sbjct: 106 QQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L + KG+ G+ P+ IQ +P +L ++++A +++G+GKTA F+L M
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDG--KDVVAMARTGSGKTACFLLPMF 155
Query: 349 SRV--DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
R+ S + + L LSPT ELA+QT + ++ KF
Sbjct: 156 ERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 62.1 bits (144), Expect = 7e-09
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +1
Query: 100 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 279
+E+K DI+ Q + + + F ++L + G+ P+ IQ+ A+P L+
Sbjct: 30 LENKTDIKSQPLEISIGNDNENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLG- 88
Query: 280 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNY-PQVLCLSPTYELAIQTGE 429
++++ Q+Q+GTGKTAAF L ++ ++ NK +VL ++PT ELA Q E
Sbjct: 89 -RDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAE 138
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 62.1 bits (144), Expect = 7e-09
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+FE L + LL + +G+ P+ IQ A+P +LA ++ A +Q+GTGKTAAF L M
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAK--SDVFATAQTGTGKTAAFGLGM 59
Query: 346 LSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
L R+ D + + L ++PT EL+IQ E AK I + V G++L K
Sbjct: 60 LQRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNM-GINIAVLVGGKDLESQQK 118
Query: 514 I 516
I
Sbjct: 119 I 119
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 62.1 bits (144), Expect = 7e-09
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +1
Query: 139 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 318
P + TF L L P + K + G+ +P+ IQ A+P LA ++++ +Q+GTG
Sbjct: 3 PRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAG--RDVLGIAQTGTG 60
Query: 319 KTAAFVL---AMLSRVDSNKNYPQVLCLSPTYELAIQTGE 429
KTA+F L ML+R + P+ L L PT ELA Q E
Sbjct: 61 KTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAE 100
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 62.1 bits (144), Expect = 7e-09
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1
Query: 184 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS 363
+KP LL+ A F+ P+ IQ +A+ L D ++ + +GTGKT AFVL +LSR+D+
Sbjct: 1 MKPELLEKFNA-SFDTPTPIQ-SAVWQRLTDG-DSIFGLAPTGTGKTLAFVLPVLSRIDT 57
Query: 364 NKNYPQVLCLSPTYELAIQTGEVA 435
N QVL L+P+ ELA+QT +VA
Sbjct: 58 NLKRTQVLILAPSQELAMQTTQVA 81
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 62.1 bits (144), Expect = 7e-09
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
++ + L ++ K + GFN P+ IQ +P ++ ++++A S++G+GKTAAFV+ ML
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPML 83
Query: 349 SRVDSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKF 453
++ + L +SPT ELA+QT +V ++ +F
Sbjct: 84 QKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF 119
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 62.1 bits (144), Expect = 7e-09
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE+++L + K + GFN P+ IQ A+P +L ++++A S++G+GKTAAF++ ++
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEG--RDVVACSRTGSGKTAAFIIPLI 358
Query: 349 SRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKF 453
+++ ++ + L + PT ELA+Q V KF
Sbjct: 359 NKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKF 395
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 62.1 bits (144), Expect = 7e-09
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
+V TF L L +LL+ + GF P+ IQ A+P L ++++ + +GTGKTAA++
Sbjct: 2 TVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPAL--DGRDVLGSAPTGTGKTAAYL 59
Query: 337 LAMLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
L L + P++L L+PT ELA+Q + A ++AK
Sbjct: 60 LPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAK 101
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE L L LL + G+ P++IQ A+P +LA ++I +Q+GTGKTAA+ L +L
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAG--HDIIGVAQTGTGKTAAYALPIL 64
Query: 349 SRVDSNKNY-PQVLCLSPTYELAIQTGEVAAKMAKF 453
++ + + P+ + PT EL +Q ++AK+
Sbjct: 65 MKIKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKY 100
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L P L+ V G+ + IQ A+P LA Q+++ +Q+GTGKTAAF L ++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAG--QDVLGIAQTGTGKTAAFTLPLI 61
Query: 349 SRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 483
++ + + P+ L ++PT ELA Q VA+ K+ KL +A+
Sbjct: 62 DKLMNGRAKARMPRALVIAPTRELADQ---VASSFEKYAKGTKLSWAL 106
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +1
Query: 232 PSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYEL 411
P+ +Q A+P LLA ++++AQ+Q+GTGKT AF+L +L RV+ K Q L ++PT EL
Sbjct: 26 PTPVQLQAIPPLLAQ--RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTREL 83
Query: 412 AIQTGEVAAKMAK 450
AIQ K+A+
Sbjct: 84 AIQITAETKKLAE 96
>UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_69,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 680
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Frame = +1
Query: 151 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAA 330
+++ + FE L + PN+ G+ + + +KIQ+ A+P + D N +S++G+GKT A
Sbjct: 109 VFTEQYFEDLQIHPNVKLGLKSSEYIKMTKIQQLAIP--IVDTKANTFIKSETGSGKTLA 166
Query: 331 FVLAMLSRVDS------NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 492
+++ ++S + S + +L + PT EL++Q + A K+ K CP I + V GE
Sbjct: 167 YMVPLISHLMSAEVRITREQGTYILIVCPTRELSLQCVDAALKVGKKCPNIVVGALVGGE 226
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 61.7 bits (143), Expect = 1e-08
Identities = 40/134 (29%), Positives = 67/134 (50%)
Frame = +1
Query: 100 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 279
++ +L I +Q ++ P+ FE L + + G+ P+ IQ +P L
Sbjct: 185 LKQQLGISVQGQEVARPIID---FEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLG- 240
Query: 280 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
++++A + +G+GKTAAF+L ++ R P L L+PT ELAIQ A ++ + P
Sbjct: 241 -RDILASADTGSGKTAAFLLPVIIRALPEDKTPSALILTPTRELAIQIERQAKELMRGLP 299
Query: 460 EIKLKYAVRGEELP 501
+K V G LP
Sbjct: 300 RMKTVLLVGGLPLP 313
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 61.7 bits (143), Expect = 1e-08
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = +1
Query: 139 PNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTG 318
P + S +F L L +LK + GF P+ IQ +P +L ++++ +++G+G
Sbjct: 94 PQTGKKSSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEG--KDVVGMARTGSG 151
Query: 319 KTAAFVLAMLSR--VDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE 492
KTAAFVL ML + V S K + + LSP+ ELA+QT +V K +++L V G+
Sbjct: 152 KTAAFVLPMLEKLKVHSAKVGARAVILSPSRELALQTLKV-VKDFSAGTDLRLAMLVGGD 210
Query: 493 ELPRGSKI 516
L K+
Sbjct: 211 SLEEQFKM 218
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 61.3 bits (142), Expect = 1e-08
Identities = 34/111 (30%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L L GV G+ P+ IQ A+P +L ++IA +++G+GKTAA+++ ++
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRG--NDIIAMARTGSGKTAAYLVPII 72
Query: 349 SRVDSNKNY-PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
+R++++ + L + PT ELA+QT +V ++ K +K + G +L
Sbjct: 73 NRLETHSTEGVRSLIICPTRELALQTIKVFNELGKL-TNLKASLIIGGSKL 122
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 61.3 bits (142), Expect = 1e-08
Identities = 41/123 (33%), Positives = 65/123 (52%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
++ + ++P+ PL V E L ++ + V+A G+ +Q A+P L +++I
Sbjct: 28 EVGSELREPDPPLDEVTVDE---LSGHMEQAVHAAGWTELMDVQRKAIPYTLDG--RDLI 82
Query: 295 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 474
QSQ+G+GKT AF+L + V+ +K QVL L+PT ELA Q E +M P
Sbjct: 83 VQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTRELARQIHEEFEQMKIATPRTNRM 142
Query: 475 YAV 483
AV
Sbjct: 143 EAV 145
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 61.3 bits (142), Expect = 1e-08
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
+ F+ L L ++K V G+ AP+ IQ +P +L ++++ +Q+GTGKTA+FVL
Sbjct: 5 LNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQH--KDVLGIAQTGTGKTASFVL 62
Query: 340 AMLSRVDSNK---NYPQVLCLSPTYELAIQTGE 429
ML+ ++ + P+ L L PT ELA Q E
Sbjct: 63 PMLTLLEKGRAKARMPRTLILEPTRELAAQVKE 95
>UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_41121_38797 - Giardia lamblia
ATCC 50803
Length = 774
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/116 (30%), Positives = 71/116 (61%), Gaps = 4/116 (3%)
Frame = +1
Query: 169 FEAL-HLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
FE L L P +LK ++++G++ + IQ+ A+P ++ ++ S++G+GKTAA+ + +
Sbjct: 35 FEKLGKLSPPVLKAIHSLGYSTLTSIQKAAIPVIIDGGDACVV--SKTGSGKTAAYSIPL 92
Query: 346 LSRVDSNKNYPQV--LCLSPTYELAIQTGEVAAKMAKFC-PEIKLKYAVRGEELPR 504
++ + ++ + L ++PT EL +Q G V K+++F PE+++ V GE L +
Sbjct: 93 VNLLGCHRATTGIRGLVIAPTRELCVQIGGVIRKLSRFTDPELRVCLLVGGEALEK 148
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 61.3 bits (142), Expect = 1e-08
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Frame = +1
Query: 139 PNSPLYS-VKTFE-ALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSG 312
P++P+ + V+TFE A H P LL+ + GF PS IQ A P LL +++I +Q+G
Sbjct: 313 PSAPIPNPVQTFEQAFHEYPELLEEIKKQGFAKPSPIQAQAWPVLLKG--EDLIGIAQTG 370
Query: 313 TGKTAAFVLAMLSRVDSN-------KNYPQVLCLSPTYELAIQ 420
TGKT AF+L ++ + P VL ++PT ELA+Q
Sbjct: 371 TGKTLAFLLPAFIHIEGQPVPRGEARGGPNVLVMAPTRELALQ 413
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
TF L L ++LK + +G+ PS IQE A+P LA ++++ +Q+GTGKT AF +
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAG--RDVLGCAQTGTGKTCAFAAPI 59
Query: 346 LSRV--DSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKFCP 459
L R+ D P + L L+PT ELA+Q E K P
Sbjct: 60 LQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLP 100
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L L L + + ++G+ + IQ +P LL ++++ +Q+GTGKTAAF L +L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEG--RDVVGLAQTGTGKTAAFALPIL 68
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGE 429
+ +D PQ L L PT ELA Q E
Sbjct: 69 ANIDVKVRSPQALVLCPTRELAQQVAE 95
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 60.9 bits (141), Expect = 2e-08
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Frame = +1
Query: 16 QETDSDDVPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPN 195
++ D+ TP A TS + + + ++ + D + K F+ LHL
Sbjct: 102 EDAAKDEKAKTPTATATSSESDSESEDGFQERAVVKGAKGDTT---FDAKAFDELHLSRP 158
Query: 196 LLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNY 375
L + A+G+ P+ IQ +P +A +++ ++ +G+GKTAAF+L L R+
Sbjct: 159 LTRACEALGYKKPTPIQAAVIP--IAMTGRDVCGRAVTGSGKTAAFMLPQLERMLHRGPR 216
Query: 376 P----QVLCLSPTYELAIQTGEVAAKMAKF 453
P VL L PT ELA+Q ++ +A+F
Sbjct: 217 PAAATHVLVLVPTRELAVQVHQMTESLAQF 246
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/104 (29%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L L +LK V +G+ P+ IQ TA+P LL ++++ ++++G+GKTA + L ++
Sbjct: 11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEG--KDVVVRARTGSGKTATYALPLI 68
Query: 349 -----SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
S++++++ Y + L+PT EL Q+ +V ++ + C ++
Sbjct: 69 QKILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKV 112
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/115 (29%), Positives = 60/115 (52%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F + L +L+G+ F PS IQ A+P LA +++ Q++SGTGKT F + +
Sbjct: 24 FSKMFLSEPVLRGLTRNNFTHPSPIQARAIP--LAKLGLDLLVQAKSGTGKTLVFTVLIT 81
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 513
+ + +PQ L + PT E+A+Q +V ++ P + K + G ++ + K
Sbjct: 82 ENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDISQDRK 136
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/110 (30%), Positives = 62/110 (56%)
Frame = +1
Query: 118 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 297
IE+ + + + S TFE+L + L+ + F+ PS +Q A+P L ++M+
Sbjct: 7 IEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLV 64
Query: 298 QSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 447
Q++SGTGKT F + + +DS ++ Q + ++PT E+++Q E K+A
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVA 114
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 60.9 bits (141), Expect = 2e-08
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Frame = +1
Query: 142 NSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGK 321
+ PL ++ F +L L P LL G+ GF + IQ LP LA +++ Q+Q+GTGK
Sbjct: 3 DKPLTNLN-FSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAG--RDIAGQAQTGTGK 59
Query: 322 TAAFVLAMLSR-------VDSNKNYPQVLCLSPTYELAIQTGEVAAK 441
T AF++ +++R V+ N P+ L L+PT ELAIQ A K
Sbjct: 60 TLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVK 106
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 60.9 bits (141), Expect = 2e-08
Identities = 41/134 (30%), Positives = 66/134 (49%)
Frame = +1
Query: 100 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADP 279
++ +L I +Q ++ P+ FE L L + G+ P+ IQ +P L
Sbjct: 185 LKQQLGILVQGQEVTRPIID---FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLG- 240
Query: 280 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 459
++++A + +G+GKTAAF+L ++ R P L L+PT ELAIQ A ++ P
Sbjct: 241 -RDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLP 299
Query: 460 EIKLKYAVRGEELP 501
+K V G LP
Sbjct: 300 RMKTVLLVGGLPLP 313
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/110 (32%), Positives = 59/110 (53%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F LK +LL+ V GF PS++Q +P + ++++ Q+++GTGKTA FVL++
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHG--KDVLCQAKAGTGKTAVFVLSV 96
Query: 346 LSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 495
L+++ + L L T ELA Q ++ KF K+K G E
Sbjct: 97 LNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF-TNFKVKAVYGGVE 145
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 60.5 bits (140), Expect = 2e-08
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +1
Query: 139 PNSPLYSVKT----FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQ 306
P SP+ + T FE L L LL + G PS IQ A+P LL ++++ SQ
Sbjct: 8 PASPIATSATPAPGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEG--KDVLVGSQ 65
Query: 307 SGTGKTAAFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
+G+GKTAAFVL ML ++ P+ L L PT ELA QT V ++ +
Sbjct: 66 TGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGR 115
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 60.5 bits (140), Expect = 2e-08
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F +L L + ++G+ P+ IQ+ A+P +L ++IA +++G+GKTA FVL +
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKG--HDLIAAAETGSGKTAGFVLPL 59
Query: 346 LSRVDS----NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 489
L ++ S N L L PT ELA+Q + + ++ CP A+ G
Sbjct: 60 LEKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYG 111
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/84 (35%), Positives = 52/84 (61%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
FE++ L+ +L++ + P+ IQ+ A+P L + +++I S +GTGKT A++L +
Sbjct: 5 FESMELEKSLVEALKKESITVPTDIQQKAIPEALKN--RDVILHSSTGTGKTLAYLLPLF 62
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQ 420
++ + K Q L L PT+ELAIQ
Sbjct: 63 MKLSAEKKEMQALILVPTHELAIQ 86
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 60.5 bits (140), Expect = 2e-08
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F L +L+ + + ++AP++IQ+ A+P ++ ++++A +++GTGKTAAF L +L
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQG--KDILAGARTGTGKTAAFALPIL 60
Query: 349 SRVDS---NKNYPQ--VLCLSPTYELAIQTGEVAAKMAKFCP 459
++ S NK PQ VL L PT ELA Q + AK P
Sbjct: 61 EKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLP 102
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +1
Query: 202 KGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQ 381
+ V + GF PS IQ+ + ++ ++ IAQ+QSGTGKTA F +A L +D++ + Q
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKG--KDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQ 104
Query: 382 VLCLSPTYELAIQT 423
L L+PT ELA QT
Sbjct: 105 ALILAPTRELAQQT 118
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 60.5 bits (140), Expect = 2e-08
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Frame = +1
Query: 121 EIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQ 300
+I+ N P +V TFE L+L +++ + + P+ IQ ++P L +M+
Sbjct: 72 QIKLLGENIPPVAV-TFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKG--NDMVGI 128
Query: 301 SQSGTGKTAAFVLAMLSRVDSNKNY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
+++G+GKTA+F++ L + + + P VL LSPT ELA+QT EVA A+FC ++
Sbjct: 129 AKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVA---AQFCVKM 185
Query: 466 KLKY 477
K+
Sbjct: 186 GYKH 189
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 60.1 bits (139), Expect = 3e-08
Identities = 36/120 (30%), Positives = 64/120 (53%)
Frame = +1
Query: 157 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 336
S +F +L L L + +G+ + +Q LP +L+ ++ A++++G+GKTAAF
Sbjct: 2 STTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGA--DVRAKAKTGSGKTAAFG 59
Query: 337 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 516
+ +L R+ + Q L L PT ELA Q + ++A+F IK+ G+ P G ++
Sbjct: 60 IGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQ--PMGQQL 117
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+F L L +LK + G+ PS IQ A+P +L Q+++A +Q+GTGKTA F L +
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEG--QDVMAAAQTGTGKTAGFTLPL 63
Query: 346 LSRV----DSNKNYPQVLCLSPTYELAIQTGE 429
L + ++ N + L L+PT ELA Q E
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAE 95
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +LK + V GF PS +Q+ A+P +L +MIAQ+Q+GTGKTAAF L ++
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEG--HDMIAQAQTGTGKTAAFGLPIM 60
Query: 349 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
S + ++ + + L + PT ELA+Q + + K
Sbjct: 61 SMMKADGSV-EGLVIVPTRELAMQVSDELFRFGK 93
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+FE+ + P ++ GV A G+ P+ IQ A+P ++A ++I +Q+GTGKTAA+ L +
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAG--HDVIGLAQTGTGKTAAYALPI 59
Query: 346 LSRVDSN-KNYPQVLCLSPTYELAIQTGE 429
+ ++ S + + L ++PT ELA Q +
Sbjct: 60 IQKMLSTPRGRVRTLVIAPTRELACQISD 88
>UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL'
isoform 4; n=11; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 4 - Nicotiana
tabacum (Common tobacco)
Length = 425
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = +1
Query: 106 SKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQ 285
S DIE + + +S + + H+ ++++ V +G+ P+++Q ALP L + +
Sbjct: 48 STSDIEARTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSG--R 105
Query: 286 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE---VAAKMAKFC 456
+ + +Q+G+GKT A++L MLS +DS ++ Q L + PT EL +Q V A M C
Sbjct: 106 DCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQAEPPTIVVATMGSLC 165
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/112 (28%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L L+KG+ G+ P+ IQ +P +L ++++A +++G+GKTA F++ +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEG--RDVVAMAKTGSGKTACFLIPLF 98
Query: 349 SRVDSNK--NYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 498
++ + + L LSPT ELA+QT + ++ +F E+K + G+ +
Sbjct: 99 EKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFM-ELKSILVLGGDSM 149
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Frame = +1
Query: 160 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 339
++ +E +L +LLK + + P+ IQ A+P L +++I +++G+GKTAAFVL
Sbjct: 697 IRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALE--MRDLIGIAETGSGKTAAFVL 754
Query: 340 AMLSRV--------DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 456
MLS V +++++ P L ++P+ ELAIQ E K A +C
Sbjct: 755 PMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYC 801
>UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain
containing protein; n=3; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 418
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALH---LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQ 285
D+++ + D SP + + +E L +L + + F PS IQ +++ +
Sbjct: 20 DLKVIQSDKTSPYSAPQDWEDLFDYDTYSDLHQKLIDNNFEKPSSIQASSIQIANGEDHP 79
Query: 286 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 447
+++ Q+Q+G+GKT AFV+ L RVD N + QV+ L P EL QT E K+A
Sbjct: 80 SILGQAQNGSGKTLAFVVNSLLRVDRNSSKVQVVILVPNMELVDQTEEYFQKLA 133
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 60.1 bits (139), Expect = 3e-08
Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +1
Query: 127 QRKDPNSPLYSVK-TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQS 303
++ D ++ S K +F+ +L +L+G+ A+ F P+ IQ+ +P L ++++ +
Sbjct: 777 EKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLG--KDIVGSA 834
Query: 304 QSGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 453
+G+GKTAAFV+ +L R + + P +V L PT ELA+Q VA K+A +
Sbjct: 835 VTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATY 887
>UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 568
Score = 60.1 bits (139), Expect = 3e-08
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Frame = +1
Query: 136 DPNSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTLLADPPQNMIAQSQSG 312
D NSP ++ E L L P LL + + F+ S +Q + L+AD +++AQ+++G
Sbjct: 68 DSNSPRFADLASENL-LDPVLLDTITQDLKFDRMSPVQAATIRHLIADRG-DVLAQAKTG 125
Query: 313 TGKTAAFVL----AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA 480
TGKT AF+L +L R S N VL +SPT ELA+Q + A + + P+ K+ A
Sbjct: 126 TGKTIAFLLPALQTLLRRPSSRGNDVSVLVISPTRELALQIAKEAEALLQRLPQYKVCTA 185
Query: 481 VRG 489
+ G
Sbjct: 186 IGG 188
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 60.1 bits (139), Expect = 3e-08
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
+E L P LL+ VY +GF P+ IQ A+P L D +++IA++ +G+GKT A+ + ++
Sbjct: 37 WENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLED-KRDIIAKASTGSGKTGAYSIPII 95
Query: 349 SRVDS---NKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 465
+ S +++ + + L PT ELA Q + K+ +C I
Sbjct: 96 QNILSEGLSEHNIKSVILVPTKELANQVTKFIEKLLVYCNSI 137
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 59.7 bits (138), Expect = 4e-08
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Frame = +1
Query: 1 DKKHNQETDSD-DVPDTPNAA---------DTSLLMKIIRQGLVESKLD-IEIQRKDPNS 147
D+ +++ D D D P+ P D SL +R G+ SK D IE++ +
Sbjct: 238 DRNRDRDGDGDGDQPEKPREVYIPAERPNDDESLFGSGVRAGINFSKYDSIEVKTSGEDV 297
Query: 148 PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTA 327
P + +F+ +L+ L + G+ P+ +Q+ +P LL+ ++++A +Q+G+GKTA
Sbjct: 298 PP-PISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSG--RDLMACAQTGSGKTA 354
Query: 328 AFVLAMLSRV-----------DSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
AF++ ++ + +N+ P+ L +SPT EL IQ + A K +K
Sbjct: 355 AFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSK 406
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F+++ L ++++G+ G+ P+ IQ +P L ++++A +++G+GKTA F++ M
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDG--RDVVAMARTGSGKTACFLIPMF 97
Query: 349 SRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKF 453
++ + K + L LSPT ELA+QT ++ +F
Sbjct: 98 EKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRF 134
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/100 (35%), Positives = 54/100 (54%)
Frame = +1
Query: 151 LYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAA 330
L S +F L L ++ + +G+ AP IQ +P LL +++ + +G+GKTAA
Sbjct: 2 LDSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGC--DLLGMAHTGSGKTAA 59
Query: 331 FVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 450
F+L +L +D + + Q L + PT ELAIQ G V K
Sbjct: 60 FLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIK 99
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/101 (34%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Frame = +1
Query: 169 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 348
F +L +++ + +GF+ S IQ ALP LA +++I ++Q+GTGKTAAF++ +L
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAG--RDIIGKAQTGTGKTAAFLITVL 157
Query: 349 SRVDSNK------NYPQVLCLSPTYELAIQTGEVAAKMAKF 453
++ + K + P+ L L+PT ELA+Q + A ++K+
Sbjct: 158 QKLLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKY 198
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 59.7 bits (138), Expect = 4e-08
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Frame = +1
Query: 166 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 345
+FEAL L+ L+ + G++ + IQ A+P +LA +++A +Q+GTGKTAAF L +
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQ--HDLLAVAQTGTGKTAAFTLPL 59
Query: 346 LSRVDSNKNYP----QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK-YAVRG 489
L R+ + ++ + L ++PT ELA Q VA + + ++ ++ +AV G
Sbjct: 60 LQRLAAKQSTKVQGVRSLIVTPTRELAAQ---VAISVEIYSTQLNIRSFAVYG 109
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 59.7 bits (138), Expect = 4e-08
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Frame = +1
Query: 115 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMI 294
+ +I+ KD S + F+ L +LLK V +GF + +Q +P LA +++
Sbjct: 6 ETKIESKDSKS---TGTEFQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGG--DLL 60
Query: 295 AQSQSGTGKTAAFVLAMLSR-VDSNKN--------YPQVLCLSPTYELAIQTGEVAAKMA 447
SQ+G+GKTAAF+L ++++ ++ N N P+VL L PT ELA Q A +
Sbjct: 61 VSSQTGSGKTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLV 120
Query: 448 KFCPEIKLKYAVRGEELPRGSKI 516
+ I++ + G +P G +I
Sbjct: 121 RGMKGIRIATVMGG--MPYGKQI 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.313 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,843,540
Number of Sequences: 1657284
Number of extensions: 8282651
Number of successful extensions: 17173
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 16262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16669
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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