SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308H12f
         (521 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    85   5e-18
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom...    80   2e-16
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p...    79   3e-16
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom...    77   2e-15
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    75   9e-15
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc...    74   1e-14
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces...    73   2e-14
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom...    71   8e-14
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3...    71   1e-13
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar...    70   2e-13
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    66   4e-12
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz...    63   2e-11
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2...    62   6e-11
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo...    60   1e-10
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    60   2e-10
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    59   3e-10
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    56   4e-09
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc...    52   7e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha...    51   9e-08
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb...    43   2e-05
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc...    42   4e-05
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom...    42   7e-05
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb...    27   2.2  
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi...    26   3.9  
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces...    25   9.0  

>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 85.4 bits (202), Expect = 5e-18
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +2

Query: 101 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKA-AGAEERFKEVAEAYEVLSDKKKR 277
           KD+YKILG++K A+D +IKKAYRKLAL YHPDKN     AE RFKEV EAY +LSD + R
Sbjct: 348 KDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESR 407

Query: 278 EIYDA 292
             +D+
Sbjct: 408 RRFDS 412


>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
           type|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 79.8 bits (188), Expect = 2e-16
 Identities = 37/64 (57%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKN--KAAGAEERFKEVAEAYEVLSDKKKR 277
           +YY +LGI+  A+  DIKKAYRKLA+KYHPDKN     GA E+F++++EAY+VL D+K R
Sbjct: 8   EYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLR 67

Query: 278 EIYD 289
             YD
Sbjct: 68  SQYD 71


>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 79.4 bits (187), Expect = 3e-16
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = +2

Query: 83  IQIKMGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNK--AAGAEERFKEVAEAYEV 256
           +Q  + +DYY IL I+  A  D IKK+YR+LA+ YHPDKN+     A E+F+++AEAY+V
Sbjct: 2   VQRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQV 61

Query: 257 LSDKKKREIYD 289
           LSD K RE YD
Sbjct: 62  LSDPKLREKYD 72


>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 407

 Score = 77.0 bits (181), Expect = 2e-15
 Identities = 34/60 (56%), Positives = 47/60 (78%)
 Frame = +2

Query: 110 YKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYD 289
           Y++L +   AS  ++KKAYRKLALKYHPDKN  AG  ++FKE++ AYE+L+D++KR  YD
Sbjct: 8   YEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAG--DKFKEISRAYEILADEEKRATYD 65


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 74.5 bits (175), Expect = 9e-15
 Identities = 32/64 (50%), Positives = 45/64 (70%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREI 283
           D YK LG++K AS  +IK AY KLA +YHPD N    A+++F E+ +AYEVL D KK++ 
Sbjct: 86  DPYKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKA 145

Query: 284 YDAH 295
           +D +
Sbjct: 146 FDTY 149


>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 379

 Score = 74.1 bits (174), Expect = 1e-14
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = +2

Query: 110 YKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYD 289
           Y  L +   AS+ ++KKAYRKLALKYHPDKN     E++FKE++ AYEVLSD ++R++YD
Sbjct: 8   YDCLEVRPEASEAELKKAYRKLALKYHPDKN--PNGEKKFKEISLAYEVLSDPQRRKLYD 65

Query: 290 AH 295
            +
Sbjct: 66  QY 67


>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 403

 Score = 73.3 bits (172), Expect = 2e-14
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = +2

Query: 107 YYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIY 286
           YY+IL + K  +D +IKK+Y+KLAL+ HPDKN A  A+E FK V++A++VLSD   R  Y
Sbjct: 114 YYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHY 173

Query: 287 D 289
           D
Sbjct: 174 D 174


>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 381

 Score = 71.3 bits (167), Expect = 8e-14
 Identities = 32/62 (51%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +2

Query: 113 KILGITKGASDDDIKKAYRKLALKYHPDKNKA-AGAEERFKEVAEAYEVLSDKKKREIYD 289
           +ILG++K AS+ +I+KAYR+L  ++HPDKN     A+E+F E+ +A+EVLSD ++R+IYD
Sbjct: 10  QILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYD 69

Query: 290 AH 295
           A+
Sbjct: 70  AY 71


>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 208

 Score = 70.5 bits (165), Expect = 1e-13
 Identities = 47/118 (39%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = +2

Query: 95  MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDK---NKAAGAEERFKEVAEAYEVLSD 265
           M KDYY IL IT  AS ++IK AY+K AL+ HPD+   +  A A E+F+ V EAY VLSD
Sbjct: 1   MFKDYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSD 60

Query: 266 KKKREIYDAHXXXXXXXXXXXXXXXXXXQSFSYTFHGDPKATFAQFFGSASPFQAFFD 439
             +R  YD                    Q  S +  G P   F Q F S S F+  F+
Sbjct: 61  NSRRAQYDRESASSSAKPRQSFFSRTNPQPQSQSQQGGPSFGFRQSF-SDSQFEQVFN 117


>SPAC1071.09c |||DNAJ domain protein, DNAJC9
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 70.1 bits (164), Expect = 2e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
 Frame = +2

Query: 89  IKMGKDYYKILGITKGASDDDIKKAYRKLALKYHPDK----NKAAGAEERFKEVAEAYEV 256
           IKM  D Y +LG+ K ASD+ I++AYRK AL++HPD+     K   A   F +VA AY V
Sbjct: 26  IKMDIDPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGV 85

Query: 257 LSDKKKREIYD 289
           LSDKK+R+ YD
Sbjct: 86  LSDKKRRKHYD 96


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 65.7 bits (153), Expect = 4e-12
 Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKA---AGAEERFKEVAEAYEVLSDKKK 274
           + Y  LG+ K A+ D IK++Y +L+  +HPD++ A   A AEE+F+ +  AYEVLSD  K
Sbjct: 8   ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSK 67

Query: 275 REIYD 289
           +EIYD
Sbjct: 68  KEIYD 72


>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
           Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 289

 Score = 63.3 bits (147), Expect = 2e-11
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKN-KAAGAEERFKEVAEAYEVLSDKKKRE 280
           DYY++LGI + A D +I +A+RK +LKYHPDKN     A E+F  +  AY  L D + R+
Sbjct: 9   DYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRK 68

Query: 281 IYDA 292
            YD+
Sbjct: 69  AYDS 72


>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 413

 Score = 61.7 bits (143), Expect = 6e-11
 Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = +2

Query: 110 YKILGITKGASDDDIKKAYRKLALKYHPDK---NKAAGAEERFKEVAEAYEVLSDKKKRE 280
           Y IL +   AS ++IKK+Y++LAL +HPDK   ++   A ERF+ V EAY++L D + RE
Sbjct: 8   YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESRE 67

Query: 281 IYDAH 295
           +YD +
Sbjct: 68  MYDMY 72


>SPBC1773.09c |mug184||meiotically upregulated gene
           Mug184|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 551

 Score = 60.5 bits (140), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKA--AGAEERFKEVAEAYEVLSDKKKR 277
           DYY IL + K A+   I+K Y  LAL+YHPD+N      A +RF+ +  A+EVLSD  KR
Sbjct: 12  DYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKR 71

Query: 278 EIYD 289
            IYD
Sbjct: 72  LIYD 75


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 60.1 bits (139), Expect = 2e-10
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAE--ERFKEVAEAYEVLSDKKKR 277
           DYY ILG    +S  +I++ Y KL L+YHPD+N    AE   +F+ + +A+EVL D K R
Sbjct: 12  DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLR 71

Query: 278 EIYD 289
           E++D
Sbjct: 72  ELFD 75


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 59.3 bits (137), Expect = 3e-10
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDK------NKAAGAEERFKEVAEAYEVLSD 265
           D Y+ILGI KG S DD+++ Y++L++K+HPDK            E+ + E+  AY  L+D
Sbjct: 98  DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTD 157

Query: 266 KKKREIY 286
            K RE Y
Sbjct: 158 DKTRENY 164


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 55.6 bits (128), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
 Frame = +2

Query: 101 KDYYKILGITK---GASDDDIKKAYRKLALKYHPDKNKAAG---AEERFKEVAEAYEVLS 262
           +D+Y +LG++K    A  + IKKA+ K  LK+HPDK  A+G    +  FK + +AYE+LS
Sbjct: 96  QDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILS 155

Query: 263 DKKKREIYDA 292
           D  +R  +D+
Sbjct: 156 DPVRRRQFDS 165


>SPAC926.05c |||diphthamide biosynthesis protein Dph4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 139

 Score = 51.6 bits (118), Expect = 7e-08
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +2

Query: 104 DYYKILGITKGAS--DDDIKKAYRKLALKYHPDKNK-AAGAEERFKEVAEAYEVLSDKKK 274
           ++Y +L +  G +  DD+IK+AYRK  L +HPDK K          +V EAY+VLS +K 
Sbjct: 2   NHYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKD 61

Query: 275 REIY 286
           R+ Y
Sbjct: 62  RQQY 65


>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 380

 Score = 51.2 bits (117), Expect = 9e-08
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 104 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKA-AGAEERFKEVAEAYEVLSDKKKRE 280
           D Y+IL +   +   +IK  YRKLAL+YHPD+N       E F ++  AY +LS+  KR+
Sbjct: 9   DCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRK 68

Query: 281 IYD 289
            ++
Sbjct: 69  WHE 71


>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 209

 Score = 43.2 bits (97), Expect = 2e-05
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +2

Query: 110 YKILGITKGASDDDIKKAYRKLALKYHPDKNK-AAGAEERFKEVAEAYEVLSDKKKREIY 286
           Y +L I  G S DDI+  YRK +L  HPDKN+    A + F  + +A   L + K RE  
Sbjct: 33  YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92

Query: 287 DA 292
           D+
Sbjct: 93  DS 94


>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 270

 Score = 42.3 bits (95), Expect = 4e-05
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 14/74 (18%)
 Frame = +2

Query: 110 YKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGA--------------EERFKEVAEA 247
           Y+IL + +  + +DIK+ Y +L  K+HPDK K A                EE F+ +  A
Sbjct: 34  YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93

Query: 248 YEVLSDKKKREIYD 289
             +LSDK++RE YD
Sbjct: 94  NALLSDKRRREEYD 107


>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 303

 Score = 41.5 bits (93), Expect = 7e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +2

Query: 89  IKMGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDK 268
           +K    +Y++L +   AS  +I +AYRK ++ YHPDKN    ++E +  +     +L + 
Sbjct: 35  LKNKATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPK--SKELYTLLGLIVNILRNT 92

Query: 269 KKREIYD 289
           + R+ YD
Sbjct: 93  ETRKRYD 99


>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 775

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +2

Query: 86  QIKMGKDYYKILGITK-GAS-----DDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEA 247
           +I  GK+ Y+   IT+ G S     +DD   A+RK + K    +NK A   +    +A  
Sbjct: 46  RISRGKNGYENRKITEEGDSKSSELNDDYLDAHRKSSTKKKSSQNKQAKESKLLDPIAFQ 105

Query: 248 YEVLSDKKKREI 283
           +++  ++  REI
Sbjct: 106 HKIALEEDDREI 117


>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
           Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 893

 Score = 25.8 bits (54), Expect = 3.9
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 142 RSTFCYSQYFIVVFAHFDLYCIRETLILDNLSTIYEIL 29
           R  F +  Y +V+F     +C+R   +++    ++E L
Sbjct: 26  RKRFSFLDYVVVIFLTVVAFCVRAQRLMNPAKVVFEEL 63


>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 658

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 462 IVVPPRFRSKNAWNGLAEPKNCANVAF 382
           + VP +++   AWN     +NCAN  F
Sbjct: 118 VQVPRQWKRNKAWNTENGLENCANSRF 144


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,031,849
Number of Sequences: 5004
Number of extensions: 38017
Number of successful extensions: 155
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -