Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308H11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.23 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   3.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 136 WKLGPRGEPEPTSTCRSARTR 74
           WK  P+G P P+ST  S  T+
Sbjct: 67  WKKSPQGAPSPSSTPSSLPTQ 87


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 388 IESTRNFINADVLKQCKKGV 447
           ++++RNF+  DV+K+   G+
Sbjct: 215 LDTSRNFVTVDVIKRTLDGM 234


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 258 GVHPS-GHLAADPAKAKDGEGLASELAA 178
           G+ P+ G+   DPA A  G G   +LAA
Sbjct: 59  GLQPTTGYYPYDPALAAYGYGAGYDLAA 86


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 124 PRGEPEPTSTCRSARTRSA 68
           P  EP+PT T  S  T+++
Sbjct: 397 PTPEPQPTQTTESEPTQAS 415


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -1

Query: 467 LPTLMIFTPFLHCFKTSALIKFRVDSMSGVCRVM*SARGQMSSSSIL 327
           LP L++FT     +    L  F+      V  +   ARG+M  S ++
Sbjct: 226 LPRLVLFTSEDAHYSIKKLASFQGIGTDNVYLIRTDARGRMDVSHLV 272


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 462 G*RRAYSRDRFLAGSEVW 515
           G +  Y++D  LAG  VW
Sbjct: 323 GLKAKYAKDNGLAGVAVW 340


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = +2

Query: 104 WFWLATWSQL 133
           W+W+  WS +
Sbjct: 629 WYWVMDWSDM 638


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,796
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)