Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 203 5e-53
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 108 3e-24
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 33 0.12
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 33 0.12
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 33 0.12
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 0.87
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 30 0.87
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 2.7
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 29 2.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.7
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 29 2.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.7
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 28 3.5
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 4.7
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 27 8.1
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 27 8.1
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 27 8.1
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 27 8.1
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 27 8.1
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 203 bits (496), Expect = 5e-53
Identities = 92/172 (53%), Positives = 124/172 (72%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 180
DNIDV +A + V+N P AN+ SA ELTCTL+L L+RHV A+ ++KAG+W R + G
Sbjct: 81 DNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMG 140
Query: 181 SELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLA 360
E+ G+TLA+LGLGR+G EVA R+ AFGM +IGFDP V+ +Q + + LE IWP A
Sbjct: 141 EEVYGRTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIWPQA 200
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
DYIT+H PLI+ T N IN + L +CKKGV+IINV RGG++ E D +++L +G
Sbjct: 201 DYITVHVPLIKQTENLINKETLAKCKKGVRIINVARGGIVNEVDLVESLNAG 252
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 108 bits (259), Expect = 3e-24
Identities = 73/181 (40%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR----HVVPASTALKAGRWD-- 162
DNIDV +A + G+ V +APG + T +L+L L R H S K D
Sbjct: 254 DNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFRRTYWHAKSYSETRKTIGADQV 313
Query: 163 RALYTGSE-LAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSA--DQCAQFHCTKM 333
R GS+ + G L ILG GRVG V R AFG++II +DPFV D+ F
Sbjct: 314 RENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERV-Y 372
Query: 334 ELEDIWPLADYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKS 513
+++ +D I+LH L + TR INAD L+QCK GV I+N GLI E D ALK+
Sbjct: 373 TMDEFMSRSDCISLHCNLGDETRGIINADSLRQCKSGVYIVNTSHAGLINENDLAAALKN 432
Query: 514 G 516
G
Sbjct: 433 G 433
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 360
LAGK + G G VG+ A + AFG +I DP ++A Q A LE+ P A
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDP-INALQAAMEGYEVTTLEEAAPKA 271
Query: 361 DYITLHT 381
+ I T
Sbjct: 272 NIIVTTT 278
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 360
LAGK + G G VG+ A + AFG +I DP ++A Q A LE+ P A
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDP-INALQAAMEGYEVTTLEEAAPKA 271
Query: 361 DYITLHT 381
+ I T
Sbjct: 272 NIIVTTT 278
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 360
LAGK + G G VG+ A + AFG +I DP ++A Q A LE+ P A
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDP-INALQAAMEGYEVTTLEEAAPKA 271
Query: 361 DYITLHT 381
+ I T
Sbjct: 272 NIIVTTT 278
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.3 bits (65), Expect = 0.87
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 187 ARCQCTEPGPTCQPSAQWKLGPRGEP 110
A CQC PTC P GP G+P
Sbjct: 92 AWCQCEPTKPTCPPGPPGPPGPAGQP 117
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 30.3 bits (65), Expect = 0.87
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -1
Query: 254 YILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHA 75
Y+L+ + R+AR LPA LP R++L A A ++ I + +
Sbjct: 154 YLLLGVAHRKSGLSRLARGLPAPPLPEGLHRTNLSVIGATSAQPE-KSEAEIALSLPVPP 212
Query: 74 LSAL-APGALITPTPFLPAES 15
L+ L +PGA T P P +
Sbjct: 213 LTPLPSPGAQSTAPPVFPTST 233
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 249 PSGHLAADPAKAKDGEGLASELAASVQSPVPPASLQRSGSWDHVASQN 106
P+G + +D +K K E EL + P PPA L + H++S N
Sbjct: 450 PTGKILSDISKLKKDEEEDQELDDPNECPPPPAPLHCNVGLHHISSGN 497
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 249 PSGHLAADPAKAKDGEGLASELAASVQSPVPPASLQRSGSWDHVASQN 106
P+G + +D +K K E EL + P PPA L + H++S N
Sbjct: 586 PTGKILSDISKLKKDEEEDQELDDPNECPPPPAPLHCNVGLHHISSGN 633
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 232 GRP-CQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 110
G+P GQ G G + C+ T P P CQP Q GP G+P
Sbjct: 108 GKPGAPGQPGTPGRPPQQPCEPTTP-PPCQPCPQGPPGPPGQP 149
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 300 SRHERVESDDVHAEGVHP 247
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 300 SRHERVESDDVHAEGVHP 247
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 181 CQCTEPGPTCQPSAQWKLGPRGEPEPT 101
CQC P C P G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 232 GRP-CQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 110
GRP GQ G G A C+ T P P C+P Q GP G P
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -2
Query: 211 GWRGSCQRARCQCTEPGPTCQPS-AQWKLGPRGEPEPTSTCRSARTRSAHWR 59
GW T GPT +P+ A W+ G G TS + R +A WR
Sbjct: 378 GWTNGANGTTID-TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 232 GRP-CQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 110
GRP GQ G G A C+ T P P C+P Q GP G P
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPF 291
LAGKT I G G VG ++ G +IG +
Sbjct: 277 LAGKTAIIQGFGNVGLHTHRYLHRAGSKVIGIQEY 311
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 248 LVATSRPTLPRPRMAR-VLPASSLPVYRARSHLP 150
L TSRPT P P R P ++ P+ R+ LP
Sbjct: 302 LATTSRPTTPSPTTPRATTPLATTPLATTRAPLP 335
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 184 RCQCTEPGPTCQPSAQWKLGPRGEP 110
+C PGP P A GP G+P
Sbjct: 134 KCPAGSPGPAGAPGAPGPQGPNGQP 158
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 367 CSPLEAKCPPAPSWCNGTG 311
C+P A PP PS C+G+G
Sbjct: 35 CAPRPACPPPPPSGCSGSG 53
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 291 ERVESDDVHAEGVHPSG--HLAADPAKAKDGEGLAS--ELAASVQSPVPPASLQRSGSWD 124
+R +S D H E A D +++ EG ++ E AAS +P PP S S
Sbjct: 236 DRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSKRS 295
Query: 123 HVAS 112
H A+
Sbjct: 296 HEAA 299
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 291 ERVESDDVHAEGVHPSG--HLAADPAKAKDGEGLAS--ELAASVQSPVPPASLQRSGSWD 124
+R +S D H E A D +++ EG ++ E AAS +P PP S S
Sbjct: 371 DRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSKRS 430
Query: 123 HVAS 112
H A+
Sbjct: 431 HEAA 434
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 291 ERVESDDVHAEGVHPSG--HLAADPAKAKDGEGLAS--ELAASVQSPVPPASLQRSGSWD 124
+R +S D H E A D +++ EG ++ E AAS +P PP S S
Sbjct: 416 DRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAPPPPPSSSSSSKRS 475
Query: 123 HVAS 112
H A+
Sbjct: 476 HEAA 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,227,086
Number of Sequences: 27780
Number of extensions: 273399
Number of successful extensions: 1389
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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