Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H11f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 150 6e-37
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 150 6e-37
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 147 5e-36
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 101 3e-22
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 87 9e-18
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 85 3e-17
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 82 2e-16
At2g45630.2 68415.m05674 oxidoreductase family protein low simil... 78 3e-15
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 76 2e-14
At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLI... 48 3e-06
At4g13940.1 68417.m02157 adenosylhomocysteinase / S-adenosyl-L-h... 34 0.067
At3g23810.1 68416.m02993 adenosylhomocysteinase, putative / S-ad... 33 0.088
At5g28310.1 68418.m03437 oxidoreductase-related low similarity t... 33 0.12
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 30 1.1
At1g79410.1 68414.m09254 transporter-related low similarity to o... 29 1.4
At4g15300.1 68417.m02342 cytochrome P450 family protein similar ... 29 2.5
At1g78490.1 68414.m09149 cytochrome P450 family protein similar ... 29 2.5
At3g26750.1 68416.m03346 expressed protein 28 3.3
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 4.4
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 28 4.4
At1g13530.1 68414.m01586 expressed protein ; expression support... 28 4.4
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 28 4.4
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 27 5.8
At3g30290.1 68416.m03825 cytochrome P450 family protein similar ... 27 5.8
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 27 7.7
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 150 bits (363), Expect = 6e-37
Identities = 72/172 (41%), Positives = 103/172 (59%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 180
DN+D+ +A + G V+NAP AN ++A E LM +AR+V A ++KAG W R Y G
Sbjct: 136 DNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGEWKRNKYVG 195
Query: 181 SELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLA 360
L GKTLA+LG G+VG EVA R GM +I DP+ AD+ + ++ A
Sbjct: 196 VSLVGKTLAVLGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLVSFDEALATA 255
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
D+I+LH PL +T +N + + KKGV+I+NV RGG+I E ++AL +G
Sbjct: 256 DFISLHMPLTPTTSKILNDETFAKMKKGVRIVNVARGGVIDEDALVRALDAG 307
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 150 bits (363), Expect = 6e-37
Identities = 69/172 (40%), Positives = 105/172 (61%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 180
DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A ++KAG+W+R+ Y G
Sbjct: 157 DNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVG 216
Query: 181 SELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLA 360
L GKTLA++G G+VG EVA R GM +I DP+ AD+ + + A
Sbjct: 217 VSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTA 276
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
D+++LH PL +T+ N + + KKGV++INV RGG+I E ++AL +G
Sbjct: 277 DFVSLHMPLTPATKKVFNDETFSKMKKGVRLINVARGGVIDEDALVRALDAG 328
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 147 bits (356), Expect = 5e-36
Identities = 73/172 (42%), Positives = 102/172 (59%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 180
DN+D+ +A + G V+NAP AN ++A E L+ +AR++ A ++KAG+W R Y G
Sbjct: 121 DNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGKWTRNKYVG 180
Query: 181 SELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLA 360
L GKTLA+LG G+VG EVA R GM++I DP+ AD+ + E A
Sbjct: 181 VSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELVSFEVAISTA 240
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
D+I+LH PL +T +N KKGV+I+NV RGG+I E L+AL SG
Sbjct: 241 DFISLHLPLTAATSKMMNDVTFAMMKKGVRIVNVARGGVIDEEALLRALDSG 292
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 101 bits (242), Expect = 3e-22
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 174
D+ID+ +A G+ V G+N +S E +L+L R+ VP + G W+ A Y
Sbjct: 131 DHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAY 190
Query: 175 TGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKM--ELEDI 348
+L GKT+ +G GR+G+ + R+ FG N++ D A + + K +L ++
Sbjct: 191 RAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEM 250
Query: 349 WPLADYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
P D I ++ PL E TR N +++ + KKGV I+N RG +++ + A++SG
Sbjct: 251 LPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 306
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 86.6 bits (205), Expect = 9e-18
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYT- 177
D ID+ +KG+ V N P +L L+L L R + +++G+W + +
Sbjct: 79 DKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLCECDRYVRSGKWKQGEFQL 138
Query: 178 GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPL 357
++ +GK++ I+GLGR+G +A R AF I + + D +++ T ++L
Sbjct: 139 TTKFSGKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTIKPDVAYKYYPTVVDLAQN--- 195
Query: 358 ADYITLHTPLIESTRNFINADVLKQC-KKGVKIINVGRGGLIQETDFLQALKSGK 519
+D + + PL E TR+ ++ V+ KGV +IN+GRG + E + ++AL G+
Sbjct: 196 SDILVVACPLTEQTRHIVDRQVMDALGAKGV-LINIGRGPHVDEQELIKALTEGR 249
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 85.0 bits (201), Expect = 3e-17
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAG---RWDRAL 171
+N+DV++A K G+ V N PG + EL +L L AR +V A ++ G W L
Sbjct: 98 NNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLYEGWLPHL 157
Query: 172 YTGSELAGKTLAILGLGRVGREVATRMY-AFGMNIIGFDPFVS------ADQCAQFHCTK 330
+ G+ L G+T+ ++G GR+G A M F MN+I FD + S QF
Sbjct: 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGQFLKAN 217
Query: 331 ME----------LEDIWPLADYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLI 480
E +E++ AD I+LH L ++T + +N + L KK ++N RG +I
Sbjct: 218 GEQPVTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKEAILVNCSRGPVI 277
Query: 481 QETDFLQALK 510
E ++ LK
Sbjct: 278 DEAALVEHLK 287
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 82.2 bits (194), Expect = 2e-16
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPG---ANALSACELTCTLMLVLARHVVPASTALKAGRWDRAL 171
D +D+D+A K G+ V P NA S E+ LML L + +L+
Sbjct: 127 DGVDIDAATKHGIKVARIPSEGTGNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP- 185
Query: 172 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIG---FDPFVSADQCAQFHCTKMELE 342
TG L GKT+ ILG G +G E+A R+ FG +I F P D ++ K E
Sbjct: 186 -TGDTLLGKTVFILGYGNIGIELAKRLKPFGSRVIATKRFWPASIVDSDSRLVDEKGSHE 244
Query: 343 DIWPLA---DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKS 513
DI+ A D + + L + T +N + + KKG ++N+ RGGLI Q L+S
Sbjct: 245 DIYTFAGKADIVVVCLRLNKETAEIVNKEFICSMKKGALLVNIARGGLINYESAFQNLES 304
Query: 514 G 516
G
Sbjct: 305 G 305
>At2g45630.2 68415.m05674 oxidoreductase family protein low
similarity to SP|P36234 Glycerate dehydrogenase (EC
1.1.1.29) (NADH-dependent hydroxypyruvate reductase)
{Hyphomicrobium methylovorum}; contains Pfam profile
PF00389: D-isomer specific 2-hydroxyacid dehydrogenase,
catalytic domain
Length = 338
Score = 78.2 bits (184), Expect = 3e-15
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD-RALYT 177
D++D+ ++G+ V NA + + + L++ + R + A+ +K W + Y
Sbjct: 102 DHVDLVECRRRGISVANAGSSFSEDVADTAVGLLIDVFRRISAANRFVKQRFWPLKGDYP 161
Query: 178 -GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWP 354
GS+L K + I+GLG +G +VATR+ AFG I + +H M++E++
Sbjct: 162 LGSKLGRKRIGIVGLGSIGSKVATRLDAFGCQI-SYSSRNRKPYDVPYHYY-MDIEEMAA 219
Query: 355 LADYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSGK 519
+D + + L E T IN DVL K I+NV RG +I E + ++ L+ G+
Sbjct: 220 NSDALIICCELNEKTLRLINKDVLSALGKRGVIVNVARGAIIDEEEMVRCLREGE 274
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 75.8 bits (178), Expect = 2e-14
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 5/177 (2%)
Frame = +1
Query: 1 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 174
D+ID+ + ++G+ + NA A + + L++ + R + A +++G W +
Sbjct: 86 DHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFGDFQ 145
Query: 175 TGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWP 354
GS+++GK + I+GLG +G VA R+ +FG +I ++ S Q + + DI
Sbjct: 146 LGSKVSGKRVGIVGLGSIGSFVAKRLESFGC-VISYNSR-SQKQSSPYRY----YSDILS 199
Query: 355 LA---DYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKSG 516
LA D + L L + T + +N +V++ K +INVGRG LI E + ++ L G
Sbjct: 200 LAENNDVLVLCCSLTDETHHIVNREVMELLGKDGVVINVGRGKLIDEKEMVKCLVDG 256
>At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLIA)
nearly identical to C-terminal binding protein
ANGUSTIFOLIA [Arabidopsis thaliana] GI:15408535;
contains Pfam profile PF02826: D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain
Length = 636
Score = 48.4 bits (110), Expect = 3e-06
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Frame = +1
Query: 7 IDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST-ALKAGRWDRALYT-- 177
+D A G+ +++ + A + L+L L R S AL A W +L
Sbjct: 96 VDSTLAADLGLRLVHVDTSRAEEIADTVMALILGLLRRTHLLSRHALSASGWLGSLQPLC 155
Query: 178 --GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD-PFVSADQC--AQFH--CTKME 336
G L I+G R +A+R AF M+++ FD P ++ ++F +M+
Sbjct: 156 RGMRRCRGMVLGIVGRSVSARYLASRSLAFKMSVLYFDVPEGDEERIRPSRFPRAARRMD 215
Query: 337 -LEDIWPLADYITLHTPLIESTRNFINADVLKQCKKGVKIINVGRGGLIQETDFLQALKS 513
L D+ +D I+LH L T +NA+ L+ K G ++N G L+ + Q L
Sbjct: 216 TLNDLLAASDVISLHCALTNDTVQILNAECLQHIKPGAFLVNTGSCQLLDDCAVKQLLID 275
Query: 514 G 516
G
Sbjct: 276 G 276
>At4g13940.1 68417.m02157 adenosylhomocysteinase /
S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH)
identical to SP|O23255 Adenosylhomocysteinase (EC
3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
(AdoHcyase) {Arabidopsis thaliana}; strong similarity to
SP|P50248 Adenosylhomocysteinase (EC 3.3.1.1) {Nicotiana
sylvestris}
Length = 485
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 360
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVG 465
D T ++ I D +++ K + N+G
Sbjct: 319 DIFVTTT----GNKDIIMVDHMRKMKNNAIVCNIG 349
>At3g23810.1 68416.m02993 adenosylhomocysteinase, putative /
S-adenosyl-L-homocysteine hydrolase, putative /
AdoHcyase, putative strong similarity to
SP|P50248|SAHH_TOBAC Adenosylhomocysteinase (EC 3.3.1.1)
(S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
{Nicotiana sylvestris}; contains Pfam profile PF00670:
S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Length = 485
Score = 33.5 bits (73), Expect = 0.088
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 187 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 360
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 361 DYITLHTPLIESTRNFINADVLKQCKKGVKIINVG 465
D T ++ I D +++ K + N+G
Sbjct: 319 DIFCTTT----GNKDIIMVDHMRKMKNNAIVCNIG 349
>At5g28310.1 68418.m03437 oxidoreductase-related low similarity to
glyoxylate reductase from Thermococcus litoralis
[gi:13515409]
Length = 233
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 196 KTLAILGLGRVGREVATRMYAFGMNI 273
K + I+GLG +G +VATR+ AFG I
Sbjct: 115 KRIGIVGLGSIGSKVATRLKAFGCQI 140
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 225 PAKAKDGEGLASELAASVQSPVPPASLQRSGSWD 124
P G AS AA+ + P PP S RS WD
Sbjct: 246 PGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g79410.1 68414.m09254 transporter-related low similarity to
organic anion transporter 3 [Rattus norvegicus]
GI:5545293; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 515
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 172 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSAD 303
Y GS + G LA++ G +GR+ +F M++ G F+S++
Sbjct: 126 YVGSIVGGVVLAMIPDGSLGRKQLLFFSSFAMSLTGISIFLSSN 169
>At4g15300.1 68417.m02342 cytochrome P450 family protein similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 487
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 147 GWQ-VGPGSVHWQRARWQDPR--HPWPWQGRPRG 239
GW +G +H+ +++DP +PW W+G+ G
Sbjct: 383 GWTFMGYPHIHFNSEKYEDPYAFNPWRWEGKDLG 416
>At1g78490.1 68414.m09149 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]
Length = 479
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +3
Query: 147 GW--QVGPGSVHWQRARWQDP--RHPWPWQGR 230
GW V P +VH+ A +++P +PW W+G+
Sbjct: 376 GWIVAVAPSAVHFDPAIYENPFEFNPWRWEGK 407
>At3g26750.1 68416.m03346 expressed protein
Length = 526
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -3
Query: 489 CLLNKPASTHVDDFHTFLALLQDIGIDKVSSRLNERSVQ 373
C+L++ T V+ F + LAL D+G+ + SR++E + +
Sbjct: 236 CILSEKGGTEVE-FESSLALSCDVGVVEPGSRISEGNAE 273
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 163 GPTCQPSAQWKLGPRGEPEPTSTCRSARTR 74
GP + +W GPRG + ST S+R R
Sbjct: 954 GPPAEGGDRWGSGPRGSDDRRSTFGSSRPR 983
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 193 GKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVS 297
GK+L ++GLG +G AFG+++ F +S
Sbjct: 182 GKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSIS 216
>At1g13530.1 68414.m01586 expressed protein ; expression supported
by MPSS
Length = 385
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 132 FHCAEGWQVGPGSVHWQRARWQDPRHPWPWQG 227
F +E ++G GSV +R +W++ R W +G
Sbjct: 296 FGVSETQKIGIGSVVLERMKWEEERFGWSKKG 327
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 242 ATSRPTLPRPRMARVL-PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 66
A + P +P + P+ S + + R L GT W R+N+ S+ ++
Sbjct: 142 AYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAI 201
Query: 65 LAPGALI 45
PGA I
Sbjct: 202 ELPGASI 208
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 303 ISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLASELA 181
I+R R DVH PS L DP + D E ELA
Sbjct: 1067 ITRESRQSETDVHISDNGPSTSLPEDPNLSSDNELEDDELA 1107
>At3g30290.1 68416.m03825 cytochrome P450 family protein similar to
Cytochrome P450 85 (SP:Q43147) {Lycopersicon
esculentum}; similar to GB:C71417 from [Arabidopsis
thaliana] (Nature 391 (6666), 485-488 (1998))
Length = 408
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +3
Query: 147 GWQ-VGPGSVHWQRARWQDPR--HPWPWQG 227
GW +G S H+ +++DP +PW W+G
Sbjct: 301 GWNFMGYPSAHFDPTKYEDPLEFNPWRWKG 330
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 193 GKTLAILGLGRVGREVATRMYAFGMN-IIGFD 285
GK+ A+ GLG VG VA A G + IIG D
Sbjct: 206 GKSTAVFGLGSVGLAVAEGARARGASRIIGVD 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,782,058
Number of Sequences: 28952
Number of extensions: 254944
Number of successful extensions: 875
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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