Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308H10f
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   1.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.5  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 281 FQNRRMKWKK 290


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 268 FQNRRMKWKK 277


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 268 FQNRRMKWKK 277


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 290 FQNRRMKWKK 299


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 268 FQNRRMKWKK 277


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 224 FQNRRMKWKK 233


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 281 FQNRRMKWKK 290


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 268 FQNRRMKWKK 277


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 56  FQNRRMKWKK 65


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 292 FQNRRMKWKK 301


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 FSNRRLKWRK 151
           F NRR+KW+K
Sbjct: 268 FQNRRMKWKK 277


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 443 YNFENI*IVTYRCD 402
           Y+FEN  I++ RCD
Sbjct: 29  YDFENFVIISPRCD 42


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 288 TIRLFYNTLINLVARNIHDNIIWFIYCF 205
           T R FY     LVAR IH   +   +C+
Sbjct: 559 TERRFYRHRERLVARGIHAEALVPRWCY 586


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 514 VYSKCMHRKPVY*KLML 464
           +YSK  HR  ++ K++L
Sbjct: 51  IYSKSFHRNEIHIKIVL 67


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 437 NCTLIIIC 460
           NCTLII+C
Sbjct: 250 NCTLIIMC 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,544
Number of Sequences: 336
Number of extensions: 2672
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)