Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308H09f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   5.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   5.8  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   5.8  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   5.8  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRE 374
           +ER  R RY+  R+RE
Sbjct: 31  EERTSRNRYSRSRERE 46


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 31  EERTSRKRYSRSREREQKL 49


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 264 EERTSRKRYSRSREREQKL 282


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 327 DERKLRGRYNEERKRESYL 383
           +ER  R RY+  R+RE  L
Sbjct: 264 EERTSRKRYSRSREREQKL 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,963
Number of Sequences: 438
Number of extensions: 3045
Number of successful extensions: 74
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)