Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H08f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 44 8e-05
SB_42311| Best HMM Match : SAP (HMM E-Value=2.2e-11) 38 0.005
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 38 0.005
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 38 0.005
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 36 0.027
SB_43666| Best HMM Match : SAP (HMM E-Value=1.2e-08) 31 0.44
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 31 0.44
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3) 31 0.58
SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_26242| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.8e-15) 31 0.76
SB_56398| Best HMM Match : E-MAP-115 (HMM E-Value=0.53) 31 0.76
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 30 1.0
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_17310| Best HMM Match : Filament (HMM E-Value=0.31) 29 2.3
SB_28831| Best HMM Match : GCK (HMM E-Value=3.1) 28 5.4
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 28 5.4
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 27 7.1
SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08) 27 7.1
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 27 9.4
SB_10136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 56.4 bits (130), Expect = 1e-08
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +1
Query: 160 LNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDP-TTFKFELTTSDAKTPSK 336
LN+LRV+DLR ELEKR L+KSGV+ +L+ RL K L E D + E D
Sbjct: 11 LNELRVVDLRQELEKRGLEKSGVKAILVDRLQKALLAEAEDEGNVEEMENEEVDENMEEG 70
Query: 337 RTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESDK 513
E + E + ++ P+ ++ D + + + ++ P+ + E +E+ K
Sbjct: 71 GEDIEEDTNEPKEEQQPVTKEKHTPDGEDIVMKLTEEFEAEDTEGPSEELPQE-EENKK 128
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1
Query: 154 RLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEE 273
R L+ L+V +L+ ELEKR L KSG + VLI+RLS++L +E
Sbjct: 171 RRLSQLKVDELKQELEKRGLKKSGNKPVLIERLSEFLLKE 210
>SB_42311| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 193
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 154 RLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYL 264
+ L L + DL+ EL KR L KSG++ VL++RL ++
Sbjct: 78 KTLESLNISDLKTELGKRKLPKSGLKSVLVERLRTHI 114
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 154 RLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYL 264
+ L L + DL+ EL KR L KSG++ VL++RL ++
Sbjct: 78 KTLESLNISDLKTELGKRKLPKSGLKSVLVERLRTHI 114
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 154 RLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYL 264
+ L L + DL+ EL KR L KSG++ VL++RL ++
Sbjct: 78 KTLESLNISDLKTELGKRKLPKSGLKSVLVERLRTHI 114
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 35.5 bits (78), Expect = 0.027
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 145 DKKRLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEE 270
+K + D+RV+D+R EL+ R L SG + LI+RL EE
Sbjct: 354 EKPVKIEDMRVVDMRKELKLRGLPVSGSKTDLIERLKASSEE 395
>SB_43666| Best HMM Match : SAP (HMM E-Value=1.2e-08)
Length = 256
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 163 NDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTT 291
+ LRV+DLR EL+ R G++ L+ RL K L+ E + T
Sbjct: 32 SQLRVVDLRKELKLRGASPYGLKAELVARLRK-LDTESKNTET 73
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 31.5 bits (68), Expect = 0.44
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Frame = +1
Query: 181 DLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFK--FELTTSDAKTPSKRT---- 342
+L A+L++ NL+ V + +QR ++ E+ G D + L D+KT K+
Sbjct: 122 ELLAKLKENNLELKDVYVIALQRANENEEDSGEDSEEEEENGHLMNGDSKTEEKKNANGK 181
Query: 343 ---RRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESDK 513
+ S E+E + + DD G ++ +S+EP E +E ++
Sbjct: 182 MGQKERHSEDEEEKENKDDSKSADKDDDKGVDEKGVD--EEGASEEPQDGEEEEEEEEEE 239
Query: 514 NS 519
S
Sbjct: 240 ES 241
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 31.5 bits (68), Expect = 0.44
Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 148 KKRLLNDLRVIDLRAE-----LEKRN--LDKSGVRGVLIQRLSKYLEEEGHDPTTFKFEL 306
KKR + RV +LRAE +EK+ L+K + L ++ K E E + +
Sbjct: 788 KKREEKEKRVAELRAERQRELMEKKKQLLEKDKLISTLTEKAKKKKEREEDAKRRLRLQK 847
Query: 307 TTS-DAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSK 483
DA+ + R + LEQE +E ++++++ + I + + +
Sbjct: 848 KADLDARRKQEEETRKQRQLEQE-EEAKRHQELLLRKQEFEEQERQRKIAEAKHQQEERE 906
Query: 484 SNMEVDESDKNS 519
+ME + +++ +
Sbjct: 907 KDMERERTEEKA 918
>SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3)
Length = 851
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/91 (19%), Positives = 36/91 (39%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+++P++ RR+ + + +S + D
Sbjct: 704 RLSVQTSDSDSPAQEGRLSVQTSDSESPAQEGRRSVQTSDSDSPAQEGRLSVQTSDSESP 763
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
+++ SD P + + V SD S
Sbjct: 764 AQEGRLSVQTSDSDSPAQEGRLSVQTSDSES 794
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/91 (18%), Positives = 36/91 (39%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+ +P++ R + + + ES + D
Sbjct: 192 RLSVQTSDSESPAQEGRLSIQTSDSDSPAQEGRLSVQTSDSESPAQEGRRSVQTSDSDSP 251
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
+++ +S+ P + + V SD +S
Sbjct: 252 AQEGSLSVQTSNSESPAQEGRLSVQTSDSDS 282
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/91 (18%), Positives = 35/91 (38%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+++P++ R + + + ES + D
Sbjct: 336 RLSVQTSDSDSPAQEGRLSVQTSDSESPAQEGRLSVQTSDSESPAQESRLSVQTSDSESP 395
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
+++ S+ P + + V SD S
Sbjct: 396 AQEGRLSVQTSDSESPAQEGRLSVQTSDSES 426
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/91 (18%), Positives = 36/91 (39%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+++P++ R + + + ES + D
Sbjct: 512 RLSVQTSDSDSPAQEGRLSVQTSDSESPAQEGRLSVQTSDSESPAQEGRLSVQTSDSESP 571
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
+++ S+ P + + V SD +S
Sbjct: 572 AQEGRLSVQTSDSESPAQEGRLSVQTSDSDS 602
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/91 (16%), Positives = 37/91 (40%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+++P++ R + + + +S + D
Sbjct: 592 RLSVQTSDSDSPAQEGRLSVQTSDSESPAQEGRLSVQTSDSDSPAQEGRLSVQTSDSESP 651
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
++++ S+ P + + + SD +S
Sbjct: 652 AQEGRRSVQTSDSESPAQEGRLSIQTSDSDS 682
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/91 (17%), Positives = 37/91 (40%)
Frame = +1
Query: 247 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGX 426
RLS + + + TSD+++P++ R + + + +S + D
Sbjct: 176 RLSVQTSDSESPAQEGRLSVQTSDSESPAQEGRLSIQTSDSDSPAQEGRLSVQTSDSESP 235
Query: 427 XXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
++++ SD P + ++ V S+ S
Sbjct: 236 AQEGRRSVQTSDSDSPAQEGSLSVQTSNSES 266
>SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 30.7 bits (66), Expect = 0.76
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 KYLEEEGHDPTTFKFELTTSDAKTPSKRTRR-TESSLEQESDETPLMEDMIVQD-DAGXX 429
KY EEE D + + + + KT + +T++ T ++++++ +T ME V+ +
Sbjct: 38 KYKEEEYEDKD---WNMKSKNMKTKNIKTKKNTTKNMKRKNMKTKNMETKNVKTKNMKTK 94
Query: 430 XXXXQNIKQKSSDEPNSKSNMEVDE 504
+NIK K++ N K+N + DE
Sbjct: 95 DMKTKNIKTKNNTTKNMKTNKKEDE 119
>SB_26242| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.8e-15)
Length = 1019
Score = 30.7 bits (66), Expect = 0.76
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +1
Query: 145 DKKRLLNDLRVIDLR-AELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDA 321
D+ ++L DL ++ LR AE K+ SG+ R ++ E DP + + +
Sbjct: 611 DQLQILTDLSLMKLRQAEKPKKRHSVSGLSSPRDDREREWRERR--DPNLRRLSMQLMNL 668
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAG 423
TP+ RR + E+ E ++ AG
Sbjct: 669 MTPTSSQRRDSTDTIYETSEVSSSDEAAFSSRAG 702
>SB_56398| Best HMM Match : E-MAP-115 (HMM E-Value=0.53)
Length = 502
Score = 30.7 bits (66), Expect = 0.76
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +1
Query: 145 DKKRLLNDLRVIDLR-AELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDA 321
D+ ++L DL ++ LR AE K+ SG+ R ++ E DP + + +
Sbjct: 339 DQLQILTDLSLMKLRQAEKPKKRHSVSGLSSPRDDREREWRERR--DPNLRRLSMQLMNL 396
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAG 423
TP+ RR + E+ E ++ AG
Sbjct: 397 MTPTSSQRRDSTDTIYETSEVSSSDEAAFSSRAG 430
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 265 EEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQ 444
E G D + E SD S + ++ S ESDE+ ++ D++ +
Sbjct: 157 ESNGSDESNESDESNGSDESNGSDESNESDES--NESDESNESDESNESDESNGSDESNE 214
Query: 445 NIKQKSSDEPN-SKSNMEVDESDKN 516
+ + SDE N S + E DES+++
Sbjct: 215 SDESNESDESNGSDESNESDESNES 239
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 283 PTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDA 420
P+ KF A TP T+ T+ L + +ET ++ + + DDA
Sbjct: 6854 PSIVKFSTVPGSASTPGDYTQVTDKVLNFDVEETRIVVSVPIVDDA 6899
>SB_17310| Best HMM Match : Filament (HMM E-Value=0.31)
Length = 458
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +1
Query: 244 QRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAG 423
QR++ +L+EE +T + +L ++ + ++ +T++S++ E+D V+ DA
Sbjct: 274 QRVTLHLQEEKRALSTERAQLASTHRELMTRERHKTDTSIQAEADLEATA--TAVKQDAA 331
Query: 424 XXXXXXQNIKQKSSDEPNSKSNME 495
+KQ+ K E
Sbjct: 332 ALSVRQAQMKQQEESLARDKREFE 355
>SB_28831| Best HMM Match : GCK (HMM E-Value=3.1)
Length = 320
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +1
Query: 250 LSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXX 429
+S+ EGHDPT + E ++ + +R+ L S + Q
Sbjct: 54 ISQESTTEGHDPTPKETEQLPTEDQQDGAEEKRSAKKLPAPSATS--------QTSPQPE 105
Query: 430 XXXXQNIKQKSSDEPNSKSNMEVDE 504
N + SDEP+ +N +VDE
Sbjct: 106 SAPALNAETSHSDEPSKPTNKQVDE 130
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +1
Query: 148 KKRLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKT 327
+K+ N+ I+ R + NL + R +++ + L+EE HD T K E+T
Sbjct: 573 RKQQENERDTIE-RLTSDVNNLTEDNAR---LRKRCENLKEE-HDATKEKMEMTQMRVSQ 627
Query: 328 PSKRTRRTESSLEQESDE 381
+ RR++ +LE+ ++E
Sbjct: 628 LEESLRRSQYALEKAAEE 645
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/93 (21%), Positives = 39/93 (41%)
Frame = +1
Query: 241 IQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDA 420
+ +L YL D T+ + ++SD + S +T ++ + SD+T + D
Sbjct: 81 VNKLQTYLHYLRSDQTSSSDQTSSSDQTSSSDQTSSSDQT--SSSDQTSSSDQTSSSDQT 138
Query: 421 GXXXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 519
+ + SSD+ +S + SD+ S
Sbjct: 139 SSSDQTSSSDQTSSSDQTSSSD--QTSSSDQTS 169
>SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08)
Length = 532
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 123 KITLDDVGQKAFTERS*SNRLACRIRET*PRQERCSWCSDTTPVEVF 263
+ +LDD+ + +T + I+++ E C WC TP + F
Sbjct: 27 EFSLDDLNRHLYTRDELKSTNDQSIKDSKEEDEMCFWCDAITPQDNF 73
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/107 (20%), Positives = 43/107 (40%)
Frame = +1
Query: 190 AELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQ 369
AE +K+ +K G + + + + EE + T E + + +T + + +
Sbjct: 534 AEAKKKREEKEGKKRRK-EGVKECKGEEEQNKTDSSSEESEDELETSDDSSSSESDTSDD 592
Query: 370 ESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESD 510
ESD+ E + D + SD+ +S S+ E +SD
Sbjct: 593 ESDDDHKSEKSSIATDTSEHPSDSSSDSGDDSDDESSDSDDEPSDSD 639
>SB_10136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +1
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVD 501
K+PS++ RRT S++ E ++ ++ Q KQ+ E N +++ +D
Sbjct: 70 KSPSRKVRRTNKSVDPEKQPQSRRRLLVQTEEDKEDLPPAQQEKQQ---EDNFLAHLNID 126
Query: 502 ESDKNS 519
+ N+
Sbjct: 127 DLSNNA 132
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,567,926
Number of Sequences: 59808
Number of extensions: 246273
Number of successful extensions: 821
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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