Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 44 9e-05
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 36 0.013
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 36 0.013
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.50
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 0.50
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.50
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.50
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.50
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.2
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 29 1.5
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 1.5
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 1.5
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 3.5
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 28 3.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 4.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.7
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 28 4.7
U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signaloso... 27 6.2
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 27 6.2
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 27 6.2
Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z47068-2|CAB54215.1| 205|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 43.6 bits (98), Expect = 9e-05
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +1
Query: 154 RLLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFE------LTTS 315
R L+ L+V +L+ ELE R L GV+ VL +RL + L +G DP + L
Sbjct: 11 RPLSSLKVTELKEELENRQLSTKGVKAVLQERLREALAAQGDDPVVDEQNPIVAGYLARQ 70
Query: 316 DAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNME 495
A R +RTES E TP E + K+K EP ++ E
Sbjct: 71 SAALAEAR-KRTES--EASGTTTPQSEVSPSKQSEASPRKGRTPRKEKKDVEPEAEPEPE 127
Query: 496 VD 501
D
Sbjct: 128 AD 129
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 36.3 bits (80), Expect = 0.013
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 LRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLE-EEGHDPTTFKFELTTSDAKTPSKRTR 345
++V +LR ELE R L+ G++ +L+QRL L+ E+ + + ++ DA + +
Sbjct: 663 MKVAELRVELELRGLETKGIKTLLVQRLQTALDTEKAAEASVAARDVEMRDAAENAVKQE 722
Query: 346 RTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDES 507
E + + P +E+ + +A + K+K +E K E E+
Sbjct: 723 GGEEN--PAAFIAPSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREA 774
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 36.3 bits (80), Expect = 0.013
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 LRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLE-EEGHDPTTFKFELTTSDAKTPSKRTR 345
++V +LR ELE R L+ G++ +L+QRL L+ E+ + + ++ DA + +
Sbjct: 663 MKVAELRVELELRGLETKGIKTLLVQRLQTALDTEKAAEASVAARDVEMRDAAENAVKQE 722
Query: 346 RTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDES 507
E + + P +E+ + +A + K+K +E K E E+
Sbjct: 723 GGEEN--PAAFIAPSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREA 774
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1063 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1120
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1121 IK-KNQETPNSEHDIEMKDASKDS 1143
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1110 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1167
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1168 IK-KNQETPNSEHDIEMKDASKDS 1190
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1112 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1169
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1170 IK-KNQETPNSEHDIEMKDASKDS 1192
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1063 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1120
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1121 IK-KNQETPNSEHDIEMKDASKDS 1143
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1110 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1167
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1168 IK-KNQETPNSEHDIEMKDASKDS 1190
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1112 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1169
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1170 IK-KNQETPNSEHDIEMKDASKDS 1192
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EEG +T + + K K+ + + S ES+E ED V+D
Sbjct: 1112 EEGTSTSTDGVPASAGNKKKLLKKKKGQKKSKTGESEEHD--EDSTVEDAGEDTIVENLE 1169
Query: 448 IKQKSSDEPNSKSNMEVDESDKNS 519
IK K+ + PNS+ ++E+ ++ K+S
Sbjct: 1170 IK-KNQETPNSEHDIEMKDASKDS 1192
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 301 ELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNS 480
ELTTS A S R+R ++S +E + D+ + + V DD ++ SDEP +
Sbjct: 428 ELTTSSAGAGSARSRGSDSVVEIDDDDDN--DGVDVDDD-----------DREDSDEPRT 474
Query: 481 KSNMEVDESDK 513
SN E D ++
Sbjct: 475 YSNSEEDSDEE 485
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW NI C ++G +
Sbjct: 202 ALLQFHKKWYSSNIMTCCIIGKE 224
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW NI C ++G +
Sbjct: 202 ALLQFHKKWYSSNIMTCCIIGKE 224
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 199 EKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESD 378
+KR S R V L Y+ +GH+ T+ L+ R ES + Q D
Sbjct: 1484 QKRKDANSPCRAVESWNLPLYVIRDGHEKITYSPSLSNPLNDDHKDLVSRFESGVAQSYD 1543
Query: 379 ETPL 390
+TPL
Sbjct: 1544 KTPL 1547
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 199 EKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESD 378
+KR S R V L Y+ +GH+ T+ L+ R ES + Q D
Sbjct: 1484 QKRKDANSPCRAVESWNLPLYVIRDGHEKITYSPSLSNPLNDDHKDLVSRFESGVAQSYD 1543
Query: 379 ETPL 390
+TPL
Sbjct: 1544 KTPL 1547
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 187 RAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFEL-TTSDAKTPS--KRTRRTES 357
R+E + N+D + + Q L +++ D + +L +TSD KTP+ KR+ +ES
Sbjct: 1055 RSERSESNIDNKMNKLTIKQSLLDSIDDYSTDRANPEDDLPSTSDEKTPTNRKRSESSES 1114
Query: 358 SLEQESDETPLMEDMI-VQDDAGXXXXXXQNIKQKSSDE--PNSKSNMEVDESDKNS 519
S + + + + ++DD+ + +SD P ++ +V ES+ N+
Sbjct: 1115 SFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDNKTPTNRKRSQVSESNINN 1171
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 304 LTTSDAKTPS--KRTRRTESSLEQESDETPLMEDMIVQ-DDAGXXXXXXQNIKQKSSDE- 471
L+TSD KTP+ KR++ +ES++ + + ++ ++ DD ++ +SD+
Sbjct: 1148 LSTSDNKTPTNRKRSQVSESNINNKIVKFATIQSLLNSIDDYSIDGESPEDDLPSTSDKK 1207
Query: 472 -PNSKSNMEVDESDKNS 519
P S+ + ES+ NS
Sbjct: 1208 TPTSRKRSQFSESNINS 1224
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 187 RAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFEL-TTSDAKTPS--KRTRRTES 357
R+E + N+D + + Q L +++ D + +L +TSD KTP+ KR+ +ES
Sbjct: 1055 RSERSESNIDNKMNKLTIKQSLLDSIDDYSTDRANPEDDLPSTSDEKTPTNRKRSESSES 1114
Query: 358 SLEQESDETPLMEDMI-VQDDAGXXXXXXQNIKQKSSDE--PNSKSNMEVDESDKNS 519
S + + + + ++DD+ + +SD P ++ +V ES+ N+
Sbjct: 1115 SFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDNKTPTNRKRSQVSESNINN 1171
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 304 LTTSDAKTPS--KRTRRTESSLEQESDETPLMEDMIVQ-DDAGXXXXXXQNIKQKSSDE- 471
L+TSD KTP+ KR++ +ES++ + + ++ ++ DD ++ +SD+
Sbjct: 1148 LSTSDNKTPTNRKRSQVSESNINNKIVKFATIQSLLNSIDDYSIDGESPEDDLPSTSDKK 1207
Query: 472 -PNSKSNMEVDESDKNS 519
P S+ + ES+ NS
Sbjct: 1208 TPTSRKRSQFSESNINS 1224
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 187 RAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFEL-TTSDAKTPS--KRTRRTES 357
R+E + N+D + + Q L +++ D + +L +TSD KTP+ KR+ +ES
Sbjct: 1055 RSERSESNIDNKMNKLTIKQSLLDSIDDYSTDRANPEDDLPSTSDEKTPTNRKRSESSES 1114
Query: 358 SLEQESDETPLMEDMI-VQDDAGXXXXXXQNIKQKSSDE--PNSKSNMEVDESDKNS 519
S + + + + ++DD+ + +SD P ++ +V ES+ N+
Sbjct: 1115 SFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDNKTPTNRKRSQVSESNINN 1171
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 304 LTTSDAKTPS--KRTRRTESSLEQESDETPLMEDMIVQ-DDAGXXXXXXQNIKQKSSDE- 471
L+TSD KTP+ KR++ +ES++ + + ++ ++ DD ++ +SD+
Sbjct: 1148 LSTSDNKTPTNRKRSQVSESNINNKIVKFATIQSLLNSIDDYSIDGESPEDDLPSTSDKK 1207
Query: 472 -PNSKSNMEVDESDKNS 519
P S+ + ES+ NS
Sbjct: 1208 TPTSRKRSQFSESNINS 1224
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = +1
Query: 187 RAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFEL-TTSDAKTPS--KRTRRTES 357
R+E + N+D + + Q L +++ D + +L +TSD KTP+ KR+ +ES
Sbjct: 1055 RSERSESNIDNKMNKLTIKQSLLDSIDDYSTDRANPEDDLPSTSDEKTPTNRKRSESSES 1114
Query: 358 SLEQESDETPLMEDMI-VQDDAGXXXXXXQNIKQKSSDE--PNSKSNMEVDESDKNS 519
S + + + + ++DD+ + +SD P ++ +V ES+ N+
Sbjct: 1115 SFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDNKTPTNRKRSQVSESNINN 1171
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 304 LTTSDAKTPS--KRTRRTESSLEQESDETPLMEDMIVQ-DDAGXXXXXXQNIKQKSSDE- 471
L+TSD KTP+ KR++ +ES++ + + ++ ++ DD ++ +SD+
Sbjct: 1148 LSTSDNKTPTNRKRSQVSESNINNKIVKFATIQSLLNSIDDYSIDGESPEDDLPSTSDKK 1207
Query: 472 -PNSKSNMEVDESDKNS 519
P S+ + ES+ NS
Sbjct: 1208 TPTSRKRSQFSESNINS 1224
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 157 LLNDLRVIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFK 297
LL V L K L K G +++R S +LEEE HD T +K
Sbjct: 237 LLATRNVYGLEKHALKTGLGKMDKNGHVVERES-FLEEEFHDETIYK 282
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +1
Query: 268 EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQN 447
EE ++ + E DAK P K +R QE E +M+ +I ++
Sbjct: 1264 EEVNEEEVVESEEVQQDAKEPEKTEKR------QEEPEPEVMQPVIPEEPQNESLESSIK 1317
Query: 448 IKQKSSDEPNSKSNMEVDESDK 513
++++ +EP+ + D +DK
Sbjct: 1318 LQEELQEEPDIVPTGDEDTADK 1339
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 217 KSGVRGVLIQRLSKYLE---EEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETP 387
KSG+ G + +S EEG +PTT +++ KT K + + E S + ETP
Sbjct: 559 KSGLVGSIASTISGLFSSKTEEG-EPTTDDSTPQSTEEKTEEKESVKVEDSTPEPEPETP 617
Query: 388 L 390
+
Sbjct: 618 V 618
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVD 501
K K+T +++SS+ Q+SD + + + ++ KQK +D+ K +E +
Sbjct: 9516 KVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDK---KQKLEAE 9572
Query: 502 ESDKNS 519
+ K S
Sbjct: 9573 ITAKKS 9578
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVD 501
K K+T +++SS+ Q+SD + + + ++ KQK +D+ K +E +
Sbjct: 9536 KVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDK---KQKLEAE 9592
Query: 502 ESDKNS 519
+ K S
Sbjct: 9593 ITAKKS 9598
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 322 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVD 501
K K+T +++SS+ Q+SD + + + ++ KQK +D+ K +E +
Sbjct: 9536 KVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDK---KQKLEAE 9592
Query: 502 ESDKNS 519
+ K S
Sbjct: 9593 ITAKKS 9598
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW +I C +VG +
Sbjct: 261 ALLQFHKKWYSSDIMTCCIVGKE 283
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW +I C +VG +
Sbjct: 202 ALLQFHKKWYSSDIMTCCIVGKE 224
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW +I C +VG +
Sbjct: 261 ALLQFHKKWYSSDIMTCCIVGKE 283
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 AILKFNKKWKFENISCCLLVGTQ 86
A+L+F+KKW +I C +VG +
Sbjct: 261 ALLQFHKKWYSSDIMTCCIVGKE 283
>U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signalosome
subunit protein 5 protein.
Length = 368
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 112 LLLSQ*NSHWVPTNKQHEIFSNFHFLLN 29
+L S NS+W+ T +FSN FL N
Sbjct: 238 ILTSLWNSYWISTLSSSPLFSNVEFLNN 265
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 262 LEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPL 390
L++E HDP +F+ S +PSKRT + SS + TP+
Sbjct: 684 LKQEMHDP---EFDAMESSMASPSKRTTK-NSSTAASASTTPV 722
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 262 LEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPL 390
L++E HDP +F+ S +PSKRT + SS + TP+
Sbjct: 638 LKQEMHDP---EFDAMESSMASPSKRTTK-NSSTAASASTTPV 676
>Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical
protein F15G9.1c protein.
Length = 278
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 295 KFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEP 474
+ E + DAKTP+ T T + + E+ + D + +DD + +K + EP
Sbjct: 86 EIEELSYDAKTPTTPTEETVDAPREVLQESQI-SDFVEEDD--DQQTEVEEVKLTLASEP 142
Query: 475 NSKSNMEVDE 504
E DE
Sbjct: 143 EESEEEEDDE 152
>Z47068-2|CAB54215.1| 205|Caenorhabditis elegans Hypothetical
protein F15G9.1b protein.
Length = 205
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 295 KFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEP 474
+ E + DAKTP+ T T + + E+ + D + +DD + +K + EP
Sbjct: 13 EIEELSYDAKTPTTPTEETVDAPREVLQESQI-SDFVEEDD--DQQTEVEEVKLTLASEP 69
Query: 475 NSKSNMEVDE 504
E DE
Sbjct: 70 EESEEEEDDE 79
>Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical
protein F15G9.1a protein.
Length = 279
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 295 KFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEP 474
+ E + DAKTP+ T T + + E+ + D + +DD + +K + EP
Sbjct: 87 EIEELSYDAKTPTTPTEETVDAPREVLQESQI-SDFVEEDD--DQQTEVEEVKLTLASEP 143
Query: 475 NSKSNMEVDE 504
E DE
Sbjct: 144 EESEEEEDDE 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,254,000
Number of Sequences: 27780
Number of extensions: 190870
Number of successful extensions: 679
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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