BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308H04f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 132 1e-31 AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 62 2e-10 Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 29 2.0 Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 3.5 Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 3.5 Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 3.5 AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 3.5 AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 3.5 AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical... 28 4.7 AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical ... 28 4.7 AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lecti... 28 4.7 U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 8.1 U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 27 8.1 U39472-5|AAK31393.1| 128|Caenorhabditis elegans Hypothetical pr... 27 8.1 >AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical protein Y37E3.8a protein. Length = 145 Score = 132 bits (319), Expect = 1e-31 Identities = 69/148 (46%), Positives = 86/148 (58%) Frame = -1 Query: 461 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXGNAGGEHHHRINMDKYHPGYFGKLGMRN 282 MA + +KTRKLRGHVS GNAGG+HHHRIN DKYHPGYFGK+GMR Sbjct: 1 MAHALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60 Query: 281 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXLPKQ 102 FH KN+++CP +N+++LW+LV ++ R K A GK PVI+ K LP+ Sbjct: 61 FHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPET 117 Query: 101 PVIVXXXXXXXXXXXXXKDVGGACVLSA 18 P+IV K GGACVL A Sbjct: 118 PLIVKARFFSHEAEQKIKKAGGACVLVA 145 >AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical protein Y37E3.8b protein. Length = 88 Score = 62.5 bits (145), Expect = 2e-10 Identities = 35/91 (38%), Positives = 48/91 (52%) Frame = -1 Query: 290 MRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXL 111 MR FH KN+++CP +N+++LW+LV ++ R K A GK PVI+ K L Sbjct: 1 MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57 Query: 110 PKQPVIVXXXXXXXXXXXXXKDVGGACVLSA 18 P+ P+IV K GGACVL A Sbjct: 58 PETPLIVKARFFSHEAEQKIKKAGGACVLVA 88 >Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical protein T22C1.9 protein. Length = 195 Score = 29.1 bits (62), Expect = 2.0 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Frame = -1 Query: 485 SARGEH*TMATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXGNAGGEHHHRINMD-----K 321 S R + +T KK+ K GH N GG H + M+ + Sbjct: 118 SIRSKKSMKSTKSKKSEKDVGHDDHKKEDVHGDQKDDNKDRNDGGRDSHVVQMEHNSEEE 177 Query: 320 YHPGYFGKLGMRNFHFRK 267 + P F KLG F+F+K Sbjct: 178 HEPSGFKKLGKSFFNFKK 195 >Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein Y37A1B.17b protein. Length = 1467 Score = 28.3 bits (60), Expect = 3.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 147 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 43 SW+ +++ Q P+T C ++K+ REE C Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38 >Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein Y37A1B.17a protein. Length = 1538 Score = 28.3 bits (60), Expect = 3.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 147 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 43 SW+ +++ Q P+T C ++K+ REE C Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38 >Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein C56A3.1 protein. Length = 393 Score = 28.3 bits (60), Expect = 3.5 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 355 PALPRPPGCLRCFPIRPCP 411 PA P+ P C C P +PCP Sbjct: 50 PACPQAPSCPVCPPPQPCP 68 >AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical protein Y37A1B.17b protein. Length = 1467 Score = 28.3 bits (60), Expect = 3.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 147 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 43 SW+ +++ Q P+T C ++K+ REE C Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38 >AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical protein Y37A1B.17a protein. Length = 1538 Score = 28.3 bits (60), Expect = 3.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 147 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 43 SW+ +++ Q P+T C ++K+ REE C Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38 >AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical protein R12E2.10 protein. Length = 753 Score = 27.9 bits (59), Expect = 4.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 201 AEVCICSRWQGPRHQYCQSWILQVARQRQ 115 AE+ ICS +GP ++Y +Q RQR+ Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641 >AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical protein T21E3.1 protein. Length = 753 Score = 27.9 bits (59), Expect = 4.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 201 AEVCICSRWQGPRHQYCQSWILQVARQRQ 115 AE+ ICS +GP ++Y +Q RQR+ Sbjct: 613 AEIAICSLLRGPTYKYPVQRAVQFLRQRR 641 >AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lectin protein 80 protein. Length = 178 Score = 27.9 bits (59), Expect = 4.7 Identities = 11/51 (21%), Positives = 26/51 (50%) Frame = -1 Query: 296 LGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 144 LG NF+++ ++++ + WT + +T LK+ + +P N+ + Sbjct: 105 LGWTNFNYQNSQDYVAESVTNAKWTAYNSETELKFVCSYYPLMPTTNLASS 155 >U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily assigned gene nameprotein 224 protein. Length = 465 Score = 27.1 bits (57), Expect = 8.1 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -1 Query: 356 GGEHHHRINMDKYHPGYF-----GKLGMRN-FHFRKNKNFCPVLNLDKLW 225 G E HH D YHP F +L + N + F KNK +C D+L+ Sbjct: 285 GVECHHHSTTDTYHPNCFRCETCRQLLVDNIYFFYKNKYYCGRHYADQLY 334 >U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine receptor, class x protein47 protein. Length = 301 Score = 27.1 bits (57), Expect = 8.1 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 Query: 240 VQNWTEILVLSKVEISHTKFAKVSR 314 + NWT L LSKV H F ++R Sbjct: 20 IANWTVFLFLSKVPSIHKSFGSLTR 44 >U39472-5|AAK31393.1| 128|Caenorhabditis elegans Hypothetical protein B0304.4 protein. Length = 128 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Frame = +3 Query: 144 SFDNIDDGDLA-IWSRCILQPRLF 212 S N+ G L IWSRCI QP F Sbjct: 14 SSGNVQKGKLLNIWSRCIAQPSSF 37 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,479,707 Number of Sequences: 27780 Number of extensions: 234645 Number of successful extensions: 583 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 561 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 580 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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