Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 188 2e-48
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 188 2e-48
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 185 1e-47
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 185 1e-47
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 185 1e-47
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 184 5e-47
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 67 8e-12
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 65 3e-11
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 64 4e-11
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 61 4e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 61 4e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 61 4e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 61 4e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 61 4e-10
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 60 1e-09
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 57 9e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 57 9e-09
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 54 5e-08
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 49 2e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 49 2e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 2e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 2e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 4e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 4e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 47 7e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 3e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 3e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 3e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 6e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 41 6e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 41 6e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 6e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 8e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.001
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.002
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 39 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 39 0.002
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 39 0.002
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 39 0.002
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 38 0.004
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 38 0.004
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 37 0.010
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.018
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.018
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.023
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.031
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.031
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.031
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.031
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.031
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.094
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 33 0.12
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.12
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.16
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.16
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.16
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.16
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 33 0.16
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.38
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 0.87
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 1.5
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 3.5
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 28 4.7
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 6.2
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 6.2
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 8.1
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 27 8.1
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 27 8.1
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 27 8.1
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 27 8.1
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 27 8.1
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 8.1
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 188 bits (459), Expect = 2e-48
Identities = 96/148 (64%), Positives = 117/148 (79%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RY
Sbjct: 282 FVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRY 340
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AV
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAV 400
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
T+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 401 TDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 89.4 bits (212), Expect = 1e-18
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E +Y
Sbjct: 189 FVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY-- 237
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTE 357
N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A +AV +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 358 MNGRIV-GTK-PLYVALAQRKEDRKAHL 435
+N I+ GT L V AQ+K +R A L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 69.7 bits (163), Expect = 1e-12
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
+V F+ P AERA +N E++ G+P+ + +Q+ + R
Sbjct: 102 YVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR----------------RAGN 144
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTE 357
N+++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A A+ +
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEK 204
Query: 358 MNGRIVGTKPLYVALAQRKEDRKAHL 435
+NG ++ K +YV Q + R L
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
FV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 387 FVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 188 bits (459), Expect = 2e-48
Identities = 96/148 (64%), Positives = 117/148 (79%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RY
Sbjct: 282 FVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRY 340
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AV
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAV 400
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
T+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 401 TDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 89.4 bits (212), Expect = 1e-18
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV FE +A+ A ++NG L+ K +YVG+ Q +A+R KEL E +Y
Sbjct: 189 FVHFETEHSAQTAIEKVNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY-- 237
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTE 357
N++VKN + +D E+L F+ FG ITSA VM + G+ KGFGFV F+ + A +AV +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 358 MNGRIV-GTK-PLYVALAQRKEDRKAHL 435
+N I+ GT L V AQ+K +R A L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 69.7 bits (163), Expect = 1e-12
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
+V F+ P AERA +N E++ G+P+ + +Q+ + R
Sbjct: 102 YVNFQQPADAERALDTMNF-EVIHGRPMRIMWSQRDPAAR----------------RAGN 144
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTE 357
N+++KNLD ID++ + F+ FG I S KV +D G SKG+GFV F + A A+ +
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEK 204
Query: 358 MNGRIVGTKPLYVALAQRKEDRKAHL 435
+NG ++ K +YV Q + R L
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
FV FE P+ A A ++N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 387 FVCFEKPEEATAAVTDMNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 185 bits (451), Expect = 1e-47
Identities = 94/148 (63%), Positives = 116/148 (78%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 196 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 254
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AV
Sbjct: 255 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAV 314
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
TEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 315 TEMNSKMVCSKPLYVAIAQRKEDRRAQL 342
Score = 87.0 bits (206), Expect = 7e-18
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +1
Query: 82 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 261
++VG+ Q +A+R +EL T Q N+YVKN D + E L K FA FG I
Sbjct: 130 VFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 179
Query: 262 TSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 435
TS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 180 TSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 239
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 165
FV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 301 FVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 355
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 185 bits (451), Expect = 1e-47
Identities = 94/148 (63%), Positives = 116/148 (78%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 193 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 251
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AV
Sbjct: 252 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAV 311
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
TEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 312 TEMNSKMVCSKPLYVAIAQRKEDRRAQL 339
Score = 105 bits (251), Expect = 3e-23
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q
Sbjct: 101 FVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQF 149
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 360
N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV +
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 361 -NGRIVGTK-PLYVALAQRKEDRKAHL 435
+ I GT L+V AQ+K +R A L
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAEL 236
Score = 69.7 bits (163), Expect = 1e-12
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEM 360
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 361 NGRIVGTKPLYVALAQRKEDRKAHL 435
NG ++ K ++V Q + R L
Sbjct: 118 NGMLLAGKKVFVGKFQPRAQRNREL 142
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 165
FV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 298 FVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 352
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 185 bits (451), Expect = 1e-47
Identities = 94/148 (63%), Positives = 116/148 (78%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 256 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 314
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AV
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAV 374
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
TEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 375 TEMNSKMVCSKPLYVAIAQRKEDRRAQL 402
Score = 105 bits (251), Expect = 3e-23
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q
Sbjct: 164 FVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQF 212
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 360
N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV +
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 361 -NGRIVGTK-PLYVALAQRKEDRKAHL 435
+ I GT L+V AQ+K +R A L
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 72.5 bits (170), Expect = 2e-13
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
+V F+ P AERA +N E + GKP+ + +Q+ + R
Sbjct: 77 YVNFQQPADAERAMDTMNF-EALHGKPMRIMWSQR----------------DPAMRRSGA 119
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 357
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ +
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 358 MNGRIVGTKPLYVALAQRKEDRKAHL 435
+NG ++ K ++V Q + R L
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNREL 205
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 165
FV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 361 FVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 415
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 184 bits (447), Expect = 5e-47
Identities = 93/148 (62%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 174
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 256 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 314
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAV 351
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKGFGFVCF PEEAT AV
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAV 374
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
TEMN ++V +KPLYVA+ QRKEDR+A L
Sbjct: 375 TEMNSKMVCSKPLYVAIGQRKEDRRAQL 402
Score = 105 bits (252), Expect = 2e-23
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV FE +AA+ A ++NG L+ GK ++VG+ Q +A+R +EL T Q
Sbjct: 164 FVHFETEEAAQNAIQKVNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQF 212
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 360
N+YVKN D + E L K FA FG ITS +VM +G+SKGFGFV F++PEEA AV +
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 361 -NGRIVGTK-PLYVALAQRKEDRKAHL 435
+ I GT L+V AQ+K +R A L
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 72.5 bits (170), Expect = 2e-13
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
+V F+ P AERA +N E + GKP+ + +Q+ + R
Sbjct: 77 YVNFQQPADAERAMDTMNF-EALHGKPMRIMWSQR----------------DPAMRRSGA 119
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTE 357
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ +
Sbjct: 120 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 358 MNGRIVGTKPLYVALAQRKEDRKAHL 435
+NG ++ K ++V Q + R L
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNREL 205
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
FV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 361 FVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 66.9 bits (156), Expect = 8e-12
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV F D A +A +N K L+ + + V A + ++Q ++ TR+
Sbjct: 88 FVEFSDHGQASQALQTMN-KRLLLDREMKVNWAVEPGQQQSKIDT----------TRH-- 134
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT 354
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+
Sbjct: 135 FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 194
Query: 355 EMNGRIVGTKPLYVALAQRK 414
+MNG+ +G + + A RK
Sbjct: 195 QMNGQWLGRRTIRTNWATRK 214
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV++ + AERA ++NG+ L + + A +K Q++ E+ E + G
Sbjct: 180 FVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSG 238
Query: 181 VN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 354
N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+
Sbjct: 239 DNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIV 293
Query: 355 EMNGRIVG 378
+MN + VG
Sbjct: 294 QMNNQDVG 301
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
LYV NLD T+ ++ + F G++T KV+ DG + + FV FS +A++A+ MN
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF-DGSNDPYAFVEFSDHGQASQALQTMNK 106
Query: 367 RIV 375
R++
Sbjct: 107 RLL 109
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 64.9 bits (151), Expect = 3e-11
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV F D + A A NG+EL+E K ++V A + E + + K E +
Sbjct: 82 FVEFSDHNQATLALQSHNGRELLE-KEMHVTWAFEPREPGEN------RSKPETSRHF-- 132
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT 354
+++V +L ID +LR+ F FG ++ AK++ ++ + KG+GFV + E+A +A+
Sbjct: 133 -HVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAID 191
Query: 355 EMNGRIVGTKPLYVALAQRKED 420
EMNG +G + + A RK D
Sbjct: 192 EMNGAWLGRRTIRTNWATRKPD 213
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V NLD I DE L F G + AK++ E G + + FV FS +AT A+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE-GLNDPYAFVEFSDHNQATLALQSHNG 100
Query: 367 RIVGTKPLYVALA 405
R + K ++V A
Sbjct: 101 RELLEKEMHVTWA 113
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 358 MNGRIVGTKPLYVALAQRK 414
MNG+ +G + + A RK
Sbjct: 83 MNGQWLGRRTIRTNWATRK 101
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV++ + AERA ++NG+ L + + A +K Q++ E+ E + G
Sbjct: 67 FVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSG 125
Query: 181 VN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 354
N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+
Sbjct: 126 DNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIV 180
Query: 355 EMNGRIVG 378
+MN + VG
Sbjct: 181 QMNNQDVG 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 358 MNGRIVGTKPLYVALAQRK 414
MNG+ +G + + A RK
Sbjct: 93 MNGQWLGRRTIRTNWATRK 111
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV++ + AERA ++NG+ L + + A +K Q++ E+ E + G
Sbjct: 77 FVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSG 135
Query: 181 VN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 354
N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+
Sbjct: 136 DNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIV 190
Query: 355 EMNGRIVG 378
+MN + VG
Sbjct: 191 QMNNQDVG 198
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
+++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 358 MNGRIVGTKPLYVALAQRK 414
MNG+ +G + + A RK
Sbjct: 164 MNGQWLGRRTIRTNWATRK 182
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV++ + AERA ++NG+ L + + A +K Q++ E+ E + G
Sbjct: 148 FVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSG 206
Query: 181 VN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 354
N +YV N+ +DE +R+ FA FG IT ++ + +G+ FV F + + A KA+
Sbjct: 207 DNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIV 261
Query: 355 EMNGRIVG 378
+MN + VG
Sbjct: 262 QMNNQDVG 269
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 288
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 352 TEMNGRIVGTKPLYVAL 402
+ MNG +G+K L V L
Sbjct: 394 SAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 352 TEMNGRIVGTKPLYVAL 402
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 360
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 361 -NGRIVG-TKPLYVALAQRKEDR 423
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 352 TEMNGRIVGTKPLYVAL 402
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 360
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 361 -NGRIVG-TKPLYVALAQRKEDR 423
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 352 TEMNGRIVGTKPLYVAL 402
+ MNG +G+K L V L
Sbjct: 487 SAMNGFQIGSKRLKVQL 503
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 360
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 361 -NGRIVG-TKPLYVALAQRKEDR 423
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 352 TEMNGRIVGTKPLYVAL 402
+ MNG +G+K L V L
Sbjct: 558 SAMNGFQIGSKRLKVQL 574
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 360
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 361 -NGRIVG-TKPLYVALAQRKEDR 423
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 97 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 276
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 277 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 423
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 97 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 276
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 277 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 423
++ +SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 56.8 bits (131), Expect = 9e-09
Identities = 37/123 (30%), Positives = 63/123 (51%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV+F + AE A +NGK + + A+K +E ++ K FEQ+ + T+
Sbjct: 180 FVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS--TKADN 236
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 360
++YV N+ D LR F+ +G I ++ +++ + FV + E ATKA+ EM
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF----KTQRYAFVRYEKKECATKAIMEM 292
Query: 361 NGR 369
NG+
Sbjct: 293 NGK 295
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = +1
Query: 160 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPE 333
R+ + +++V +L + +E L+ F FG ++ AKV+ ++ +SKG+GFV F + +
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Query: 334 EATKAVTEMNGRIVGTKPLYVALAQRK--EDRKAHLT 438
A A+ MNG+ +G + + A RK E+ + LT
Sbjct: 188 NAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKEL 66
FV +E + A +A +E+NGKE+
Sbjct: 276 FVRYEKKECATKAIMEMNGKEM 297
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKA 348
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E + A
Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
Query: 349 VTEMNGRIVGTKPLYVALAQRKEDR 423
+ MNG+ + + + V+ A +++ +
Sbjct: 159 LEAMNGQFLCNRAITVSYAFKRDSK 183
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 169 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 342
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 343 KAVTEMNGRIVGTKPLYVALAQRKE 417
A+ +N + KP+ V A E
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHE 93
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKA 348
G N++V NLD +D++ L F+ FG I K+M ++ G SKGF F+ F+S E + A
Sbjct: 109 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 168
Query: 349 VTEMNGRIVGTKPLYVALAQRKEDR 423
+ MNG+ + + + V+ A +++ +
Sbjct: 169 LEAMNGQFLCNRAITVSYAFKRDSK 193
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 169 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 342
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 343 KAVTEMNGRIVGTKPLYVALAQRKE 417
A+ +N + KP+ V A E
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHE 103
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 360
++ +L + + DE L K F + + AKV+ E +SKG+GFV F E+ +A+ EM
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 361 NGRIVGTKPLYVALAQRKE 417
+G+ VG +P+ + + KE
Sbjct: 265 DGKYVGNRPIKLRKSAWKE 283
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 50.4 bits (115), Expect = 8e-07
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 166 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 339
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 76 TPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 135
Query: 340 TKAVTEMNGRIVGTKPLYVALAQRKED 420
AV +N G + L Q+++D
Sbjct: 136 AAAVDGLNTE--GVQAQMAKLQQQEQD 160
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 360
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+ ++ +
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 222
Query: 361 NG 366
NG
Sbjct: 223 NG 224
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 166 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 339
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 340 TKAVTEMNGRIVGTKPLYVALAQRKED 420
AV +N G + L Q+++D
Sbjct: 162 AAAVDGLNTE--GVQAQMAKLQQQEQD 186
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 360
NLY+ NL ++ L E FG + S +++ D +S+G GF S E+ ++ +
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 248
Query: 361 NG 366
NG
Sbjct: 249 NG 250
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKA 348
+G NLYV + ++ L F PFG I +++++ ++ G SKG GFV F +EA A
Sbjct: 126 KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
Query: 349 VTEMNGRI 372
+ +NG I
Sbjct: 186 IKTLNGSI 193
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE 357
NL + L + E +R F G I S K++ + G+S G+GFV + E+A +AV+
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 358 MNGRIVGTKPLYVALAQRKEDR 423
NG + K + V+ A+ D+
Sbjct: 103 FNGLRLQNKTIKVSYARPSNDQ 124
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVT 354
G L+V NL DD L + F+ FG I + K++ + + KG+ FV S+ EA A+
Sbjct: 373 GYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAML 432
Query: 355 EMNGRIVGTKPLYV 396
+NG + K L V
Sbjct: 433 SLNGTNLAGKTLQV 446
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
+V E+ A++A L + V+G+P+++ + +K + KF T +
Sbjct: 636 YVVMENDQKAQQAL--LKDRVPVKGRPMFISAN----DPEKRVGFKFS-------TTLEK 682
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAK-VMLEDGRSKGFGFVCFSSPEEATKAVTE 357
++V+N+ D+ L+ F+ FGT+TS + V +DG+ KG FV F + A K V
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVAS 742
Query: 358 MNGRIVGTKPLYVALA 405
+ ++ + L VAL+
Sbjct: 743 GDKLMLRERELEVALS 758
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
++V NLD T ++ +R+ +I A+ D +GF +V + ++A +A+ +
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKDRV 654
Query: 367 RIVGTKPLYVA 399
+ G +P++++
Sbjct: 655 PVKG-RPMFIS 664
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 106 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 285
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 286 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 396
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 34.7 bits (76), Expect = 0.041
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQ 177
FV +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 147 FVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKK 205
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAV 351
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 206 YFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 352 TEMN 363
MN
Sbjct: 266 AGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 106 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 285
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 286 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 396
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 35.5 bits (78), Expect = 0.023
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQ 177
FV +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 147 FVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKK 205
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAV 351
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 206 YFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
MN +G + L V D +L
Sbjct: 266 AGMNMFDLGGQYLRVGKCVTPPDALTYL 293
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 106 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 285
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 286 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 396
G K F FV + PE A A MNG+++G + L V
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
Score = 35.5 bits (78), Expect = 0.023
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQ 177
FV +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 147 FVEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKK 205
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAV 351
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 206 YFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 352 TEMNGRIVGTKPLYVALAQRKEDRKAHL 435
MN +G + L V D +L
Sbjct: 266 AGMNMFDLGGQYLRVGKCVTPPDALTYL 293
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 367 RIVGTKPLYVALAQRKEDRK 426
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 367 RIVGTKPLYVALAQRKEDRK 426
++ + + V A + K
Sbjct: 215 SMIEGRKIEVNCATARVHSK 234
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 367 RIVGTKPLYVALA-QRKEDRKA 429
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 123
FV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 143 FVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 367 RIVGTKPLYVALA-QRKEDRKA 429
+ + + V LA QR ++KA
Sbjct: 162 TTIEGRRVEVNLATQRVHNKKA 183
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 123
FV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 143 FVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 182
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTE 357
++YV N +E L F+ G I + +++ E GR +GF F+ F+ A +AV +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 358 MNGRIVGTKPLYVALAQR 411
MNG +PL V LA +
Sbjct: 66 MNGAEFNGRPLRVNLANK 83
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 363
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F A+ A+ + N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSN 64
Query: 364 GRIVGTKPLYV 396
+K L V
Sbjct: 65 QTFFNSKKLTV 75
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 180
FV F A+ A ++ G EL++G L + + ++ + LKRK + K + +
Sbjct: 693 FVQFYTAFDAKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQG----EC 747
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS---KGFGFVCFSSPEEATKA 348
L V+NL + + F FG + + ++ + G+ +GFGFV F S +EA +A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 360
L+++NL ++ L+ F +G ++ +V+++ G KGF V F PE A A + +
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 361 NGRIVGTKPLYVALAQRKEDRK 426
+G + + +++ K ++
Sbjct: 341 DGYVFKGRMMHILPGDEKRTKE 362
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L F PFG + + + + E G+ +GFGFV F E+A A+ M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 361 NGRIVGTKPLYVALAQ 408
N + K + V A+
Sbjct: 73 NESELFGKTIRVNFAR 88
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKA 348
QG ++YV N+ +E + FA G + + +++ E GR +GF FV FS A +A
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 349 VTEMNGRIVGTKPLYVALAQR 411
V ++NG + L V A +
Sbjct: 64 VEQLNGVAFNGRNLRVNYANK 84
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 241 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 417
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 61
Query: 418 DRKA 429
++KA
Sbjct: 62 NKKA 65
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQK 123
FV ++PD A+RA E NG +EG+ + V A ++ +K
Sbjct: 25 FVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQRVHNKK 64
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAV 351
G ++YV N ++ L F+ G +++ +++ E GR +GF FV F+ A +AV
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAV 62
Query: 352 TEMNGRIVGTKPLYVALAQRKED 420
+ NG + L V LAQ + +
Sbjct: 63 DQFNGVDFNGRALRVNLAQNRNN 85
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = +1
Query: 112 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--E 285
E K+ K QLK++ +G ++++NL +E +++E + FG I A + +
Sbjct: 241 EPAKKPKNPKAQLKTDESIT-EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKD 299
Query: 286 DGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTKPLYVALA-QRKE 417
G SKG FV FS+P EA+ + + +G I+ + + LA RKE
Sbjct: 300 SGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDNRLVKANLAIPRKE 345
Score = 31.1 bits (67), Expect = 0.50
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +1
Query: 106 KAERQKELKRKFEQLKSERLTRY-QGVNLYVKNLDDTIDDERLR----KEFAPFGTITSA 270
K ER E RK K E + V L + NL I+D +L+ K +P IT
Sbjct: 389 KRERIAEAMRK----KLENTNMFISPVRLCIHNLPQKINDVKLKELAQKFTSPGALITEC 444
Query: 271 KVMLE------DGRSK--GFGFVCFSSPEEATKAVTEMN 363
+V ++ DG+ K GFGFV F A + + ++N
Sbjct: 445 RVWMDKKRLTPDGKPKSSGFGFVAFKEHMHALECLKKLN 483
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEM 360
NL+V ++ D + D L + F + + AK+ DG SKG GFV F + + A+ EM
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 361 NGRIVGTKPLYVALAQRKEDR 423
+ VG + + LA + +R
Sbjct: 217 HRTKVGGCRIILKLAGSRGER 237
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM- 360
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 361 -NGRIVG-TKPLYVALAQRKEDR 423
+ + G + PL V A ++D+
Sbjct: 204 HSQTMEGCSAPLVVKFADTQKDK 226
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAV 351
Q V+L V +D DE +K F GT+ ++ + DG SKGFGFV SS E K +
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL 230
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 348
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 360
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 361 NGRIVGTKPLYVALAQRKEDRK 426
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 360
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 361 NGRIVGTKPLYVALAQRKEDRK 426
I G K + V A+ +E++K
Sbjct: 91 EQTIKG-KSVEVKPAKSRENKK 111
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 348
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 363
L++ L ++E LR+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTE 357
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F + A A+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 358 MNG 366
+NG
Sbjct: 79 LNG 81
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 363
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 364 GRIVGTKPLYVALAQRKEDR 423
G +G K L V LA + R
Sbjct: 353 GMQLGDKQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 363
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 364 GRIVGTKPLYVALAQRKEDR 423
G +G K L V LA + R
Sbjct: 353 GMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 363
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 364 GRIVGTKPLYVALAQRKEDR 423
G +G K L V LA + R
Sbjct: 328 GMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 363
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 364 GRIVGTKPLYVALAQRKEDR 423
G +G K L V LA + R
Sbjct: 331 GMQLGDKQLVVQLACANQQR 350
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 357
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 358 MNGRIVGTKPLYVALAQ 408
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 357
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 358 MNGRIVGTKPLYVALAQ 408
+G++V + L V LA+
Sbjct: 80 TDGKLVDGRELRVTLAK 96
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 361 NGRIVG 378
+ + G
Sbjct: 176 SHMVNG 181
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 361 NGRIVG 378
+ + G
Sbjct: 138 SHMVNG 143
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 229 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 361 NGRIVG 378
+ + G
Sbjct: 138 SHMVNG 143
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 229 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
+R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 361 NGRIVG 378
+ + G
Sbjct: 176 SHMVNG 181
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 357
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEM 360
LYV + + ++ L + F +GT+T ++++L+ K GFGFV F + + V +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 361 NGRIVG 378
+ + G
Sbjct: 176 SHMVNG 181
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 193 VKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 363
V NL ++++ LR F G + + + G KGF FV F S ++A +A+ E+N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
+++ L T E +++ F +G + A +M + R +GFGFV F S E A K V E+
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEI 194
Query: 361 NGRIVGTKPLYVALAQRKE 417
+ + K + AQ KE
Sbjct: 195 HFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 361 NGRIVGTK 384
+ G K
Sbjct: 107 EHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
+++ L T E +++ F +G + A +M + R +GFGFV F S E A K V E+
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEI 194
Query: 361 NGRIVGTKPLYVALAQRKE 417
+ + K + AQ KE
Sbjct: 195 HFHEINGKMVECKKAQPKE 213
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 361 NGRIVGTK 384
+ G K
Sbjct: 107 EHELDGKK 114
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKA 348
L V NL ++ LR F FG I ++ + G S+GFGF+ F+ E+AT A
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 363
+++ NL + ++L + F G IT ++ +G+SKG + ++ P EA +AV+ +N
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLN 249
Query: 364 GRIVGTKPLYVAL 402
G+ + + L V +
Sbjct: 250 GQRLFDRNLVVKM 262
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.018
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFG 309
G NL++ +L D L FAPFG I SAKV ++ SK FG
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 184 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 363
N++V+ + + D L + FG IT V + G+GFV F + A K + EM+
Sbjct: 97 NVFVRGISRDMPDTEL---YQAFGGITDGVVQCHV--ADGYGFVLFDTRANAQKKIVEMD 151
Query: 364 GRIVGTKPLYVALAQ 408
G+ + K + V+ A+
Sbjct: 152 GKTLNGKLISVSWAR 166
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 288
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 289 -GRSKGFGFVCFSSPEEATKAVTEMNG 366
G+SKGF F+C+ AV NG
Sbjct: 75 TGKSKGFAFLCYKDQRSTILAVDNFNG 101
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 339
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 110
Query: 361 NGRIVG 378
++ G
Sbjct: 111 PHKLGG 116
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 396
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 162 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 217
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 130
Query: 361 NGRIVG 378
++ G
Sbjct: 131 PHKLGG 136
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 396
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 182 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 237
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.031
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 131
Query: 361 NGRIVG 378
++ G
Sbjct: 132 PHKLGG 137
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 223 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 396
+ LR F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 183 DSLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 238
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 339
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 283 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 417
+ G KGF +V F + ++ A++ +NG G + L V AQ+++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 360
++V L D+ L + F FG I A V+ + +S+G+GFV A +A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 361 NGRIVGTK 384
N I G K
Sbjct: 97 NPIIDGRK 104
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
LY+KNL I E + + F FG + +V ++G FV + +A A ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG-NTAETRGTAFVVYEDIFDAKTACEHLSG 79
Query: 367 RIVGTKPLYVALAQ 408
V + L V Q
Sbjct: 80 YNVSNRYLVVLYYQ 93
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 367 RIVG 378
+ +G
Sbjct: 59 KELG 62
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKEL 66
FV F+D AE A +LNGKEL
Sbjct: 40 FVEFDDKRDAEDAVHDLNGKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 367 RIVG 378
+ +G
Sbjct: 59 KELG 62
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKEL 66
FV F+D AE A +LNGKEL
Sbjct: 40 FVEFDDKRDAEDAVHDLNGKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 367 RIVG 378
+ +G
Sbjct: 59 KELG 62
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKEL 66
FV F+D AE A +LNGKEL
Sbjct: 40 FVEFDDKRDAEDAVHDLNGKEL 61
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKE----FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 354
LY+ NL++ I + LRK F FG I S + + +G V F A+ A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSV-MCFRTLKMRGQAHVIFKELPAASAARE 68
Query: 355 EMNGRIVGTKPLYVALAQRKED 420
+NG KP+ + A+ D
Sbjct: 69 ALNGFPFYEKPMRIQFAREDSD 90
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 367 RIVGTKPLYVALA 405
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 367 RIVGTKPLYVALA 405
RI+ + + V A
Sbjct: 173 RIIHGRQVRVRFA 185
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 32.7 bits (71), Expect = 0.16
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Frame = +1
Query: 94 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 249
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 250 FGTI------TSAKVML---EDGRSKGFGFVCFSSPEEATKAVTEMNG 366
G I K L E+G+ KG G C+ E A ++G
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDG 249
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.29
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 181 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 360
V +Y+ L + D + F +G ++ V++++G FGFV F +A AV ++
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKNG----FGFVDFQDQRDADDAVHDL 55
Query: 361 NGRIVGTKPLYVALAQRK 414
NG+ + + + + +RK
Sbjct: 56 NGKELCGERVILEFPRRK 73
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 31 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
E A IE +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 288
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKG--FGFVCFSSPEEATKAVTEM 360
+YV N + +D+E L + F G + KV+L D R F V F A+ M
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKFALVEFEDELSVLFAIELM 72
Query: 361 NG 366
NG
Sbjct: 73 NG 74
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 193 VKNLDDTIDDERLRKEFAPFGTITSAKV---MLEDGRSKGFGFVCFSSPEEATKAVTEMN 363
+KNL + L + F+ +G I + + + +G+G+V + + E+A K++ M+
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 364 GRIVGTKPLYVAL 402
G + ++V +
Sbjct: 197 GGQIDGMAVHVEM 209
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 351
G +Y+ ++ +L F +G+I S + + G +GF + F S + A KA+
Sbjct: 24 GQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAI 83
Query: 352 TE----MNGRIVGTKPLYVALAQRKE 417
+ ++G V +P +++ K+
Sbjct: 84 EQRPHVIDGDRVDVEPYIPLISKNKK 109
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 22 DAAERACIELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 195
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 196 KNLDDTIDDER 228
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 502 RLGIFGPFAACAY*PFSACTEMLSALYGPPC 410
+L +FGP C P C EM+SA G PC
Sbjct: 344 QLPLFGPSPICCPTPELTCNEMVSA--GTPC 372
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 94 RAQKKAERQKEL-KRKFEQLKSERLTR 171
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 LYVKNLDDTIDDERLRKEFAPF-GTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 363
+++KN+ I ++ +K G + S KV + +V F +PE+A KA+ ++
Sbjct: 29 IHIKNIPTFIGFKQFKKVLEKILGDVKSKKVR----HMSDYAYVTFETPEDAQKAINLVD 84
Query: 364 G 366
G
Sbjct: 85 G 85
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 136 KFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRSKGFGF 312
+F++ + L YQG+ L +LD+ + K T A + + D R FG
Sbjct: 351 RFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELLMKTGATEEKILDTRVSIFGC 410
Query: 313 VCFSSPEEATKAVTEMNGRIV 375
+C + E+NG+I+
Sbjct: 411 MCKLDFTDLEPMFNELNGKIL 431
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 178 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 276
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 100 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 240
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 100 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 225
Q+ ER+K++ FE+ E+L R + + + + I+D+
Sbjct: 227 QQNQEREKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDD 268
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 58 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 165
KE+VE K + +KK E+++E K K+E K E L
Sbjct: 349 KEIVEEK-----KEEKKEEKKEEKKEKYEDDKKEEL 379
>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical protein
ZK970.5 protein.
Length = 1143
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 133 RKFEQLKSERLTRY--QGVNLYVKNLDDTIDDERLRK 237
RK LT Y + V+ YV+NL D DDE +R+
Sbjct: 1097 RKIASFTDSELTNYSFRSVSPYVENLSDN-DDEEIRR 1132
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL 84
FV FED AE AC +L+GK + EG +
Sbjct: 39 FVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL 84
FV FED AE AC +L+GK + EG +
Sbjct: 39 FVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 1 FVAFEDPDAAERACIELNGKELVEGKPL 84
FV FED AE AC +L+GK + EG +
Sbjct: 39 FVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 22 DAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKN 201
++ E+A I+ +E V+G+P GR AER +E+ +K ++ + R + KN
Sbjct: 172 NSEEKALIQ---QEAVKGEPKNRGRPCGAAERSREVVKKLQKQPPRKRGRPLKI---AKN 225
Query: 202 LDDTIDDERLRKE--FAPFGTITS 267
++ I+ ++ K+ P T+ S
Sbjct: 226 MEPEINQKKDTKQVHVCPICTLAS 249
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 241 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 366
F PFG I + + +GFGFV F+ A ++ +NG
Sbjct: 104 FRPFGKIIAVNYFAQ----QGFGFVQFNEAGSADESCRSLNG 141
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +1
Query: 97 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD 222
A+KKA+R ++++FE++K++R R+Q + + +TIDD
Sbjct: 1087 ARKKAKR---IRQQFEKVKTDRYRRFQD---FFDPVANTIDD 1122
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 175 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR 294
+ +YV NL + +E+L + + +GT+ ++ + GR
Sbjct: 817 EAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISKKGGR 856
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,640,094
Number of Sequences: 27780
Number of extensions: 198605
Number of successful extensions: 946
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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