Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308H03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              24   0.82 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.5  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   5.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   7.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   7.7  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -1

Query: 392 YNGLVPTIRPFISVTALVASSGEEKQTNPKPLLRPSSSITFADVI 258
           Y G  PT+R   S+    + S  E  T   PL   + +++F   +
Sbjct: 70  YGGEQPTLRLLCSIAGGTSESQWEDVTGSTPLTFVNDTVSFTTTV 114


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 161 RSDFSCSNLRFNSF*RSAFFCARPT*RGLPSTSSLP 54
           R+D S S+   +S   + F+  +PT    P  S LP
Sbjct: 368 RTDISSSSSSISSSEENDFWQPKPTLEDAPQNSLLP 403


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 31  ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
           +R  I+   K LVE KP        K +  K+ + KFE+
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDPDKKFRVKFEE 121


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 31  ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
           +R  I+   K LVE KP        K +  K+ + KFE+
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEE 121


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 31  ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 147
           +R  I+   K LVE KP        K +  K+ + KFE+
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEE 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,057
Number of Sequences: 438
Number of extensions: 2596
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)