Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H02f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 237 3e-63
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 236 6e-63
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 234 3e-62
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 87 9e-18
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 85 3e-17
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 78 4e-15
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 77 5e-15
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 71 5e-13
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 70 1e-12
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 70 1e-12
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 70 1e-12
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 70 1e-12
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 69 3e-12
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 69 3e-12
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 69 3e-12
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 68 4e-12
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 68 4e-12
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 67 6e-12
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 67 6e-12
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 67 6e-12
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 67 6e-12
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 67 8e-12
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 66 2e-11
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 65 2e-11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 63 1e-10
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 63 1e-10
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 63 1e-10
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 62 2e-10
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 62 2e-10
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 61 4e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 61 4e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 60 7e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 60 7e-10
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 60 9e-10
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 60 9e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 60 1e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 59 2e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 59 2e-09
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 58 3e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 58 4e-09
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 58 5e-09
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 57 6e-09
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 57 8e-09
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 56 1e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 6e-08
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 54 6e-08
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 53 1e-07
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 53 1e-07
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 53 1e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 53 1e-07
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 52 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 52 2e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 52 3e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 51 4e-07
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 51 4e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 51 5e-07
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 50 9e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 9e-07
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 50 9e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 9e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 50 1e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 50 1e-06
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 50 1e-06
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 49 2e-06
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 49 2e-06
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 49 2e-06
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 49 2e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 49 2e-06
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 49 2e-06
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 49 2e-06
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 49 2e-06
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 49 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 49 2e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 48 3e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 48 3e-06
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 48 3e-06
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 48 3e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 48 5e-06
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 48 5e-06
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 48 5e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 47 7e-06
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 47 7e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 47 7e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 47 7e-06
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 47 7e-06
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 47 7e-06
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 47 7e-06
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 47 7e-06
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 47 7e-06
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 47 7e-06
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 47 9e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 47 9e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 46 1e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 1e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 46 1e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 46 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 46 1e-05
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 46 1e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 46 2e-05
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 46 2e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 46 2e-05
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 46 2e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 45 3e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 45 3e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 45 4e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 44 5e-05
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 5e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 44 5e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 6e-05
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 6e-05
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 44 6e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 44 6e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 44 6e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 44 6e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 44 6e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 44 6e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 44 8e-05
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 43 1e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 43 1e-04
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 43 1e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 43 1e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 42 2e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 42 2e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 2e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 3e-04
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 42 3e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 42 3e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 41 4e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 4e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 41 4e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 41 6e-04
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 6e-04
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 41 6e-04
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 41 6e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 40 8e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 40 0.001
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 40 0.001
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 40 0.001
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 40 0.001
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 40 0.001
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 39 0.002
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 39 0.002
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 39 0.002
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 38 0.003
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.003
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.003
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 38 0.003
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 38 0.003
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.004
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.004
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.005
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.005
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 38 0.005
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 38 0.005
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 37 0.007
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 37 0.007
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 37 0.007
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 37 0.007
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 37 0.009
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 37 0.009
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 37 0.009
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.012
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 36 0.017
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.017
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.029
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.029
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 35 0.038
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.038
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.050
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 34 0.050
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 34 0.067
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 34 0.067
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 34 0.067
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.088
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.12
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.12
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.15
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.15
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.20
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 32 0.20
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 32 0.20
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 32 0.27
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 32 0.27
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 32 0.27
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 31 0.36
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 31 0.36
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 0.36
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.36
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.47
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 31 0.47
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 31 0.47
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.47
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.47
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.47
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.47
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.47
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.47
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.47
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.62
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.62
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 30 0.82
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 1.1
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 30 1.1
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 29 1.4
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 1.4
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 1.4
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 1.4
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 29 1.9
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 1.9
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 1.9
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 1.9
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 1.9
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 29 2.5
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 2.5
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 2.5
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 29 2.5
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 29 2.5
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 29 2.5
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 2.5
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 3.3
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 28 3.3
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 3.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 4.4
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 28 4.4
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 4.4
At5g60920.1 68418.m07642 phytochelatin synthetase, putative / CO... 27 5.8
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 27 5.8
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 27 5.8
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 27 5.8
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 5.8
At1g26330.1 68414.m03211 hypothetical protein 27 5.8
At4g04570.1 68417.m00670 protein kinase family protein contains ... 27 7.7
At2g18810.1 68415.m02189 hypothetical protein contains Pfam prof... 27 7.7
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 27 7.7
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 237 bits (580), Expect = 3e-63
Identities = 111/167 (66%), Positives = 131/167 (78%), Gaps = 2/167 (1%)
Frame = +1
Query: 19 MSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 198
M+E L L GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 379 VSGSRDKTIXLWNTLAECXYTIXD--DGHSDWVSCVRFSPNHATPLL 513
VS SRD+TI LWNTL EC YTI + +GH DWVSCVRFSPN P +
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 167
Score = 61.7 bits (143), Expect = 3e-10
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 282
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHS 462
+W+L+ K HT V +VA S D SG +D + LW+ LAE + +S
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEGKKLYSLEANS 236
Query: 463 DWVSCVRFSPN 495
+ + FSPN
Sbjct: 237 -VIHALCFSPN 246
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/112 (24%), Positives = 50/112 (44%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
KL TL GH G+V+ +A +P + S +D +++W L + Y + ++
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL-------EANS 236
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 369
+ + S Y L + + +++WDL + ED D+ + A DN
Sbjct: 237 VIHALCFSPNRYWLCAATEHGIKIWDLESKSIV---EDLKVDLKAEAEKADN 285
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 236 bits (578), Expect = 6e-63
Identities = 109/166 (65%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Frame = +1
Query: 19 MSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 198
M+E L L G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 379 VSGSRDKTIXLWNTLAECXYTIXD-DGHSDWVSCVRFSPNHATPLL 513
VS SRD+TI LWNTL EC YTI + DGH +WVSCVRFSPN P +
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTI 166
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 55 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I +
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 412 WN 417
W+
Sbjct: 260 WD 261
Score = 57.6 bits (133), Expect = 5e-09
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 282
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
+W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAE 224
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 234 bits (572), Expect = 3e-62
Identities = 107/166 (64%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Frame = +1
Query: 19 MSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 198
M+E L L GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 379 VSGSRDKTIXLWNTLAECXYTIXD-DGHSDWVSCVRFSPNHATPLL 513
VS SRD+TI LWNTL EC YTI + DGH +WVSCVRFSPN P +
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTI 166
Score = 61.3 bits (142), Expect = 4e-10
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 55 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I +
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 412 WN 417
W+
Sbjct: 260 WD 261
Score = 58.4 bits (135), Expect = 3e-09
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 282
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
+W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAE 224
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 86.6 bits (205), Expect = 9e-18
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
SSD + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 406 XLWN-TLAECXYTIXDDGHSDWVSCVRFS 489
+W+ T +C + HSD V+ V F+
Sbjct: 138 RIWDVTTGKCLKVL--PAHSDPVTAVDFN 164
Score = 82.2 bits (194), Expect = 2e-16
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D +W
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 415 NT-LAECXYTIXDDGHSDWVSCVRFSPN 495
++ C T+ DD + VS VRFSPN
Sbjct: 183 DSGTGHCVKTLIDDENPP-VSFVRFSPN 209
Score = 62.9 bits (146), Expect = 1e-10
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-----AAGKTTRRFEDHTKDV 342
+ + L H+ +S V SSDG S S DKT+R + + + + F H +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 343 LSVAFSVDNRQIVSGSRDKTIXLWNT-LAECXYTIXDDGHSDWVSCVRFSP 492
VAFS D R IVS S DKT+ LW+ T+ GH+++ CV F+P
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCVNFNP 123
Score = 56.8 bits (131), Expect = 8e-09
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T K L H+ VT + N + +I+SSS D +W D + + +
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW----DSGTGHCVKTLIDDEN 198
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQI 378
+S V S +G + L G+ D TLRLW++++ K + + H + +S AFSV N ++I
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 379 VSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
VSGS D + +W L +GH++ V V P
Sbjct: 259 VSGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHP 295
Score = 54.8 bits (126), Expect = 3e-08
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 279
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
+W+L + K ++ E HT+ V++VA I SGS DKT+ +W E
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 85.0 bits (201), Expect = 3e-17
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +1
Query: 100 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDD-- 453
RLW+ G+ F H V V++S D+R ++SGS+D T+ +W + + D
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK---KLKQDLP 441
Query: 454 GHSDWVSCVRFSPN 495
GH+D V V +SP+
Sbjct: 442 GHADEVFAVDWSPD 455
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/100 (35%), Positives = 48/100 (48%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH+ + V S DG SGS D T+RLWDL + H VL+VA+S D + +
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 379 VSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
VSGS+ I WN GH W++ + + P H
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVH 206
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/122 (30%), Positives = 58/122 (47%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH V + +P I S+S DK++ +W G GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN-----GITGQFVTVFRGHVGPVYQVS 409
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S+D LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLK 469
Query: 409 LW 414
LW
Sbjct: 470 LW 471
Score = 54.0 bits (124), Expect = 6e-08
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 226 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
LSS ++ S D R+WD+ K+ HT V V + D I +GS
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGS 259
Query: 391 RDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
+D TI +W T + GH W++ + S +
Sbjct: 260 QDCTIKMWET-TQGKLIRELKGHGHWINSLALSTEY 294
Score = 46.0 bits (104), Expect = 2e-05
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Frame = +1
Query: 16 KMSETL--KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 189
KM ET KL L+GH W+ +A + +Y ++ + + D T + ++ QK
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY--VLRTGAFDHTGRQYPPNEEK------QK 316
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVD 366
L ++ D +SGS D T+ LW+ + K +R H + V V FS D
Sbjct: 317 ALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD 371
Query: 367 NRQIVSGSRDKTIXLWNTLAECXYTI 444
+ I S S DK++ LWN + T+
Sbjct: 372 GKWIASASFDKSVRLWNGITGQFVTV 397
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 77.8 bits (183), Expect = 4e-15
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + +W
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 415 NTL-AECXYTIXDDGHSDWVSCVRFSPN 495
+ C T+ DD S VS +FSPN
Sbjct: 198 DAKEGTCLKTLIDD-KSPAVSFAKFSPN 224
Score = 77.4 bits (182), Expect = 5e-15
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
SSD +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+T
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 403 IXLWNT-LAECXYTIXDDGHSDWVSCVRFS 489
I +W +C I HS +S V F+
Sbjct: 152 IRIWEVKTGKCVRMI--KAHSMPISSVHFN 179
Score = 70.1 bits (164), Expect = 8e-13
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 367 NRQIVSGSRDKTIXLWNTLA--ECXYTIXDDGHSDWVSCVRFSP 492
+ S S D T+ +W+ + EC + GH+++V CV F+P
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVNFNP 138
Score = 54.0 bits (124), Expect = 6e-08
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
+T K ++ H+ ++ + N + +I+S+S D + +W D + +
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFN-RDGSLIVSASHDGSCKIW----DAKEGTCLKTLIDDK 212
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQ 375
S +S S +G + L + D TL+L + A GK + + HT V + AFSV N +
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 272
Query: 376 IVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
IVSGS D + LW+ A +GH+D V V P
Sbjct: 273 IVSGSEDNCVYLWDLQARNILQRL-EGHTDAVISVSCHP 310
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIX 408
++G Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKTI
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
Query: 409 LW 414
+W
Sbjct: 328 IW 329
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 77.4 bits (182), Expect = 5e-15
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
+ NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 412 WN-TLAECXYTIXDDGHSDWVSCVRFS 489
W+ + A C + GH+ V + +S
Sbjct: 568 WDLSTARCITPLM--GHNSCVWSLSYS 592
Score = 67.3 bits (157), Expect = 6e-12
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
+S DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Query: 409 LWNTLAECXYTIXDD--GHSDWVSCVRFSPNHATPL 510
LW+ + T ++ G+S+ + +R P +TP+
Sbjct: 609 LWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 60.1 bits (139), Expect = 9e-10
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S G+Y S S D+T R+W + + R H D V + + I +GS DKT+
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVR 524
Query: 409 LWNT-LAECXYTIXDDGHSDWVSCVRFSPN 495
LW+ EC GH V + SP+
Sbjct: 525 LWDVQTGECVRIFI--GHRSMVLSLAMSPD 552
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/121 (30%), Positives = 63/121 (52%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+ +W
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 415 N 417
+
Sbjct: 257 H 257
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
+ ++G+ D +R+++ + FE H + VA ++S S D I LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 427 ECXYTIXDDGHSDWVSCVRFSP 492
T +GHS +V V F+P
Sbjct: 131 GWLCTQIFEGHSHYVMQVTFNP 152
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ + V ++ +R++V G + +I
Sbjct: 257 HATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSI 295
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 69.7 bits (163), Expect = 1e-12
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 208 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 382 SGSRDKTIXLWNTLAE---CXYTIXDDGHSDWVSCVRFS 489
+GS D T L++ Y DG + V+ + FS
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Frame = +1
Query: 67 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 237
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 109 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 399
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 400 TIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
T LW+T A GH V+ V+F P+
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 367 NRQIVSGSRDKTIXLW--NTLAECXYTIXDD----GHSDWVSCVRFSPNHATPLL 513
+ + G D ++ ++ A+ T+ GH +VSC ++ PN L+
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 69.7 bits (163), Expect = 1e-12
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 208 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 202
Query: 382 SGSRDKTIXLWNTLAE---CXYTIXDDGHSDWVSCVRFS 489
+GS D T L++ Y DG + V+ + FS
Sbjct: 203 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 241
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Frame = +1
Query: 67 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 237
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 47 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 105
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 399
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 106 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 165
Query: 400 TIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
T LW+T A GH V+ V+F P+
Sbjct: 166 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 228
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 229 LSSDGNYALSGSWDKTLRLW 288
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW--N 417
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 16 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 75
Query: 418 TLAECXYTIXDD----GHSDWVSCVRFSPNHATPLL 513
+ A+ T+ GH +VSC ++ PN L+
Sbjct: 76 STADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 111
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 340 VLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
V S+ ++ + +IVS S+D + +WN L T WV FSPN
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTS-QKTHAIKLPCAWVMTCAFSPN 56
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 69.7 bits (163), Expect = 1e-12
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 208 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 382 SGSRDKTIXLWNTLAE---CXYTIXDDGHSDWVSCVRFS 489
+GS D T L++ Y DG + V+ + FS
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Frame = +1
Query: 67 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 237
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 109 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 399
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 400 TIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
T LW+T A GH V+ V+F P+
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 228
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 229 LSSDGNYALSGSWDKTLRLW 288
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 37.5 bits (83), Expect = 0.005
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 367 NRQIVSGSRDKTIXLW--NTLAECXYTIXDD----GHSDWVSCVRFSPNHATPLL 513
+ + G D ++ ++ A+ T+ GH +VSC ++ PN L+
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 228
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 409 LWN 417
+W+
Sbjct: 255 IWH 257
Score = 54.0 bits (124), Expect = 6e-08
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 375
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 376 IVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S S D+TI +WN L D H V+CV + P L
Sbjct: 158 FASASLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
+ ++G+ D +R+++ + FE H+ + VA ++S S D I LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 427 ECXYTIXDDGHSDWVSCVRFSP 492
T +GHS +V V F+P
Sbjct: 131 GWACTQIFEGHSHYVMQVTFNP 152
Score = 35.5 bits (78), Expect = 0.022
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 228
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 409 LWN 417
+W+
Sbjct: 255 IWH 257
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 375
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 376 IVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S S D+TI +WN L D H V+CV + P L
Sbjct: 158 FASASLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = +1
Query: 184 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 363
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 364 DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ +V+G+ D I ++N + + HSD++ CV P
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP 109
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 228
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 409 LWN 417
+W+
Sbjct: 255 IWH 257
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 375
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 376 IVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S S D+TI +WN L D H V+CV + P L
Sbjct: 158 FASASLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = +1
Query: 184 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 363
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 364 DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ +V+G+ D I ++N + + HSD++ CV P
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP 109
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 228
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 409 LWN 417
+W+
Sbjct: 255 IWH 257
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 375
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 376 IVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S S D+TI +WN L D H V+CV + P L
Sbjct: 158 FASASLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/103 (22%), Positives = 44/103 (42%)
Frame = +1
Query: 184 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 363
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 364 DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ +V+G+ D I ++N + + HSD++ CV P
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP 109
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 67.7 bits (158), Expect = 4e-12
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTI 405
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 406 XLWN 417
LW+
Sbjct: 164 KLWD 167
Score = 51.2 bits (117), Expect = 4e-07
Identities = 30/131 (22%), Positives = 56/131 (42%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ I+ V S + +G D +++WDL G+ T E H + ++ S D +++
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 385 GSRDKTIXLWN 417
D + +W+
Sbjct: 240 NGMDNKLCVWD 250
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 226 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
+L S DG +GS D+ + +WD + +T + HT V F I S S
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSS 334
Query: 394 DKTIXL 411
DK I L
Sbjct: 335 DKNIYL 340
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 357
P L GH + + + G SGS D+ + LW + K + H +L + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 358 SVDNRQIVSGSRDKTIXLWN 417
+ D QIVS S DKT+ W+
Sbjct: 105 TSDGSQIVSASPDKTVRAWD 124
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 328 HTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSD 465
H V ++ F+ I SGS D+ I LW +C + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 67.7 bits (158), Expect = 4e-12
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 216
L T GH + ++A +P + ++S DKT +W + N G GHS +
Sbjct: 331 LLQTFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSV 384
Query: 217 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
+ DG A S D R+WDL G++ F+ H K V SV FS + + SG D
Sbjct: 385 YGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Query: 397 KTIXLWN-TLAECXYTIXDDGHSDWVSCVRFSP 492
+W+ + + Y I H++ VS V++ P
Sbjct: 445 NQCRIWDLRMRKSLYII--PAHANLVSQVKYEP 475
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +1
Query: 142 VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 321
+W++ + N + L H +DVV S + + S D+T +LW G + F
Sbjct: 281 LWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTF 335
Query: 322 EDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW--NTLAECXYTIXDDGHSDWVSCVRFSPN 495
E H + VAF + + + S DKT LW NT AE + +GHS V + F +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE---LLLQEGHSRSVYGIAFQQD 392
Query: 496 HA 501
A
Sbjct: 393 GA 394
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 285
+ S D +W L ++ Y IP H++ +S V +G + + S+D + +
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIP-----AHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 286 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
W + H V S+ + D+ I + S D+TI LW +
Sbjct: 493 WSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 67.3 bits (157), Expect = 6e-12
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 385 GSRDKTIXLWNTLAECXYTIXDDG-HSDWVSCVRFSPNHATPL 510
GS D+T+ W+ E I G + V C+ F+P+ T L
Sbjct: 203 GSADRTVKFWD--LETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 373 QIVSGSRDKTIXLWNTLAE-CXYTIXDDGHSDWVSCVRFSPN 495
SGS D + +W+ + C +T GH+ V+ +RF+P+
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTY--KGHTRGVNVLRFTPD 154
Score = 32.3 bits (70), Expect = 0.20
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH V + P ++S D + VW LT G H I +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTA-----GKLLTEFKSHEGQIQSL 191
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK-T 402
+GS D+T++ WDL + T V ++F+ D + ++ G ++
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLK 251
Query: 403 IXLWNTL 423
I W +
Sbjct: 252 IFSWEPI 258
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 67.3 bits (157), Expect = 6e-12
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 385 GSRDKTIXLWNTLAECXYTIXDDG-HSDWVSCVRFSPNHATPL 510
GS D+T+ W+ E I G + V C+ F+P+ T L
Sbjct: 203 GSADRTVKFWD--LETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 373 QIVSGSRDKTIXLWNTLAE-CXYTIXDDGHSDWVSCVRFSPN 495
SGS D + +W+ + C +T GH+ V+ +RF+P+
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTY--KGHTRGVNVLRFTPD 154
Score = 32.3 bits (70), Expect = 0.20
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH V + P ++S D + VW LT G H I +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTA-----GKLLTEFKSHEGQIQSL 191
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK-T 402
+GS D+T++ WDL + T V ++F+ D + ++ G ++
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLK 251
Query: 403 IXLWNTL 423
I W +
Sbjct: 252 IFSWEPI 258
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 67.3 bits (157), Expect = 6e-12
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 LKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 210
LK + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 211 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
I V S+ ++ S DKT+++W ++ G + FE HT VL +F D Q VS
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Query: 391 RDKTIXLWN-TLAECXYTIXDDGHSDWV 471
D + LWN +EC T D H D V
Sbjct: 603 ADGLLKLWNVNTSECIATY--DQHEDKV 628
Score = 65.3 bits (152), Expect = 2e-11
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
ETLK + +GH G V +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDV-----DGGFCTHYFRGH 143
Query: 205 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVD 366
+S ++ D N +SGS D T+R+WDL A T ++ E H V S+A S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 367 NRQIVSGSRDKTIXLWN 417
+ S RDK + LW+
Sbjct: 204 GLTLFSAGRDKVVNLWD 220
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Frame = +1
Query: 43 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 207
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 387
I+ V ++ + + +GS D+T +W L + H + + SV FS ++ +++
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 388 SRDKTIXLW 414
S DKT+ +W
Sbjct: 560 SGDKTVKIW 568
Score = 51.2 bits (117), Expect = 4e-07
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 201
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 202 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAA----------GKTTRRFEDHTKDVLS 348
H+ I V + ++ +SGS D+TL++W L KT H KD+ S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 349 VAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFS 489
VA + ++ + +GS D+T +W L + + + GH + V FS
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVEFS 550
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/124 (23%), Positives = 55/124 (44%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL+GH + + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+DG +S D L+LW++ + ++ H V ++A I +G D I
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Query: 406 XLWN 417
LW+
Sbjct: 650 NLWH 653
Score = 46.8 bits (106), Expect = 9e-06
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T+ G + +T +A +P ++ S+ + + VW L E I + GH + +
Sbjct: 55 TIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDL---ETLKCIRSWK--GHEGPVMGM 108
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDK 399
+ G + D+ + +WD+ G T F H V S+ F D+ + ++SGS D
Sbjct: 109 ACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDA 168
Query: 400 TIXLWNTLAE 429
T+ +W+ A+
Sbjct: 169 TVRVWDLNAK 178
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 52 RGHNGWVTQIATNP-KYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
RGH G V+ I +P ++++S S D T+ VW L +N + H ++ +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNA-KNTEKKCLAIMEKHFSAVTSIA 199
Query: 229 LSSDGNYALSGSWDKTLRLWDL 294
LS DG S DK + LWDL
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDL 221
Score = 44.0 bits (99), Expect = 6e-05
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWD-KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 363
KRL G++ I+D+ D L+ + + + +R++D+A + H + VLS+ V
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCV 411
Query: 364 D---NRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFS 489
N IV+GS+DKT+ LWN ++ + GH+ + V F+
Sbjct: 412 SSSGNVLIVTGSKDKTVRLWNATSKSCIGV-GTGHNGDILAVAFA 455
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 67.3 bits (157), Expect = 6e-12
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLAT 295
Query: 385 GSRDKTIXLWNTLAECXYTIXDDG-HSDWVSCVRFSPN 495
GS DKT+ W+ E I G + V C+ F+P+
Sbjct: 296 GSADKTVKFWD--LETFELIGSGGTETTGVRCLTFNPD 331
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 207
Query: 373 QIVSGSRDKTIXLWNTLAE-CXYTIXDDGHSDWVSCVRFSPN 495
SGS D + +W+ + C +T GH+ V+ +RF+P+
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTY--KGHTRGVNVLRFTPD 247
Score = 34.3 bits (75), Expect = 0.050
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 1/127 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH V + P I+S D + VW LT G H I +
Sbjct: 231 TYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTA-----GKLLHEFKSHEGKIQSL 284
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK-T 402
+GS DKT++ WDL + T V + F+ D + ++ G ++
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLK 344
Query: 403 IXLWNTL 423
I W +
Sbjct: 345 IFSWEPI 351
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 66.9 bits (156), Expect = 8e-12
Identities = 39/131 (29%), Positives = 61/131 (46%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ IS + S DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Query: 385 GSRDKTIXLWN 417
GS D+T+ W+
Sbjct: 151 GSADRTVKFWD 161
Score = 57.6 bits (133), Expect = 5e-09
Identities = 34/127 (26%), Positives = 58/127 (45%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
+L GH V +A N + ++L+ + + +W L + + GH S V
Sbjct: 2 SLCGHTSPVDSVAFNSEEV-LVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 55
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
G + SGS D LR+WD + ++ HT+ + ++ FS D R +VSG D +
Sbjct: 56 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVV 115
Query: 406 XLWNTLA 426
+W+ A
Sbjct: 116 KVWDLTA 122
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/117 (23%), Positives = 44/117 (37%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH ++ I +P ++S D + VW LT G H I +
Sbjct: 86 TYKGHTRGISTIEFSPD-GRWVVSGGLDNVVKVWDLTA-----GKLLHEFKCHEGPIRSL 139
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 140 DFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/131 (28%), Positives = 62/131 (47%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
S IS + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLAT 201
Query: 385 GSRDKTIXLWN 417
GS D+T+ W+
Sbjct: 202 GSADRTVKFWD 212
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH+ + V S L+G+ ++LWD+ K R F H + +V F
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 373 QIVSGSRDKTIXLWNTLAE-CXYTIXDDGHSDWVSCVRFSPN 495
+ SGS D + +W+ + C T GHS +S +RF+P+
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTY--KGHSRGISTIRFTPD 153
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH S V G + SGS D L++WD+ + ++ H++ + ++ F+ D R +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 379 VSGSRDKTIXLWNTLA 426
VSG D + +W+ A
Sbjct: 158 VSGGLDNVVKVWDLTA 173
Score = 33.5 bits (73), Expect = 0.088
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAEC 432
++G D + LW + + HT V SVAF +++G+ I LW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 433 XYTIXDDGHSDWVSCVRFSP 492
GH S V F P
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP 110
Score = 30.7 bits (66), Expect = 0.62
Identities = 28/117 (23%), Positives = 43/117 (36%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T +GH+ ++ I P ++S D + VW LT G H I +
Sbjct: 137 TYKGHSRGISTIRFTPD-GRWVVSGGLDNVVKVWDLTA-----GKLLHEFKFHEGPIRSL 190
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
+GS D+T++ WDL + V S+ F D R + G D
Sbjct: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDD 247
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 65.3 bits (152), Expect = 2e-11
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +1
Query: 103 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 282
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT-LAECXYT 441
+ L +GK + F HT V F+ D +I++ S D T+ +W++ +C T
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 48.4 bits (110), Expect = 3e-06
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = +1
Query: 109 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 273
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 274 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
+++W + G RRF+ H++ V S++FS D Q++S S D+T
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Score = 43.6 bits (98), Expect = 8e-05
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSG 387
S DG + S S D + +WD +GK + F H VL + FS D+ + SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 388 SRDKTIXLWN-TLAECXYTIXDDGHSDWVSCVRFS 489
S+D I +W C D HS V+ + FS
Sbjct: 282 SQDGKIKIWRIRTGVCIRRF--DAHSQGVTSLSFS 314
Score = 31.1 bits (67), Expect = 0.47
Identities = 30/130 (23%), Positives = 52/130 (40%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
+T K LRG + V I PK + I+ ++ ++ + L R G
Sbjct: 383 QTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNREGGD 442
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
F++ V S+ G++ DK L ++ +G H KDV+ + + +
Sbjct: 443 --FVAACV-STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLAT 499
Query: 385 GSRDKTIXLW 414
S D T+ LW
Sbjct: 500 YSEDCTMKLW 509
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 62.9 bits (146), Expect = 1e-10
Identities = 37/119 (31%), Positives = 58/119 (48%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 237
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
G +S S DK LR+WDL + H +V SV + R +V+GS D+ + +
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 51.6 bits (118), Expect = 3e-07
Identities = 27/99 (27%), Positives = 48/99 (48%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
LYGH + + +SSDG ++GS DK L++W L G + H V+ V F +
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFS 489
+ S +D+ + W+ + + + +GH + C+ S
Sbjct: 638 YLFSIGKDRLVKYWDA-DKFEHLLTLEGHHAEIWCLAIS 675
Score = 48.0 bits (109), Expect = 4e-06
Identities = 33/135 (24%), Positives = 63/135 (46%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ V + +Y S D+ ++ WD + E H ++ +A S +V+
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVT 683
Query: 385 GSRDKTIXLWNTLAE 429
GS D+++ W+ E
Sbjct: 684 GSHDRSMRRWDRSEE 698
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/148 (22%), Positives = 62/148 (41%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 201
S+TL + G + VT IA++ ++ D ++ +W + G +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSAS--SLVAVGYADGSIRIW-----DTEKGTCEVNFNS 104
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H ++ + + G+ SGS D + LWD+ R H V + F +++V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 382 SGSRDKTIXLWNTLAECXYTIXDDGHSD 465
S S+DK + +W+ + I HS+
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSE 192
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
V +S D + D T++++ + + K H V+ + S D IV+GS+DK
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 403 IXLWN-TLAECXYTIXDDGHSDWVSCVRFSPN 495
+ +W +C +I H D V V+F N
Sbjct: 606 LKIWGLDFGDCHKSIF--AHGDSVMGVKFVRN 635
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 387
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 388 SRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
+ + +W+ ++ DGH+ V+ + FS N
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFSEN 406
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 399
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 400 TIXLWNTLAE----CXYTIXDDGHSDWVSCVRFSPNH 498
T+ +W + C YT+ D HS V V P +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTN 321
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/60 (23%), Positives = 34/60 (56%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + + LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 387
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 388 SRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
+ + +W+ ++ DGH+ V+ + FS N
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFSEN 406
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 399
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 400 TIXLWNTLAE----CXYTIXDDGHSDWVSCVRFSPNH 498
T+ +W + C YT+ D HS V V P +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTN 321
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/60 (23%), Positives = 34/60 (56%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + + LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/123 (26%), Positives = 57/123 (46%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
+S+ Y S DK ++ WDL K R + H V +A +++G RD
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 409 LWN 417
+W+
Sbjct: 286 VWD 288
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/126 (26%), Positives = 51/126 (40%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ + GH V +A +P D++L+ RD VW + + L GH
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA-----LSGH 301
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ + V ++GS D T++ WDL GKT H K V ++ S
Sbjct: 302 DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFAS 361
Query: 385 GSRDKT 402
S D T
Sbjct: 362 ASADNT 367
Score = 48.0 bits (109), Expect = 4e-06
Identities = 36/124 (29%), Positives = 54/124 (43%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH V +A + ++ M S+ DK + W L E N I + +GH + +
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMF-SAGDDKQVKCWDL---EQNKVI--RSYHGHLSGVYCL 266
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
L + L+G D R+WD+ H V SV + Q+V+GS D TI
Sbjct: 267 ALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTI 326
Query: 406 XLWN 417
W+
Sbjct: 327 KFWD 330
Score = 33.5 bits (73), Expect = 0.088
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 295 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVS 474
A K R + H V SVAF N +GS D+TI +W+ +A + GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVR 222
Query: 475 CVRFSPNH 498
+ S H
Sbjct: 223 GLAVSNRH 230
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
+S+ Y S DK ++ WDL K R + H V +A +++G RD
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 409 LWN 417
+W+
Sbjct: 280 VWD 282
Score = 50.4 bits (115), Expect = 7e-07
Identities = 33/124 (26%), Positives = 53/124 (42%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K+ + GH V +A +P D++L+ RD VW + + +P H
Sbjct: 242 EQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------H 294
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ V+ ++GS D T++ WDL GK+ +H K V ++A VS
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVS 354
Query: 385 GSRD 396
S D
Sbjct: 355 ASAD 358
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/100 (26%), Positives = 42/100 (42%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH ++ V + +GS D+T+++WD+A G H V +A S +
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ S DK + W+ L + GH V C+ P
Sbjct: 226 YMFSAGDDKQVKCWD-LEQNKVIRSYHGHLHGVYCLALHP 264
Score = 34.7 bits (76), Expect = 0.038
Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Frame = +1
Query: 91 PKYPDMILSSSRDKTLIVWKLT--RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS 264
PK + S+ +K L+V RD NN G P K + + S+ N + +
Sbjct: 88 PKGSKELRKSATEKALVVGPTLPPRDLNNTGNPGKS----TAILPAPGSFSERNLSTAAL 143
Query: 265 WDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAEC 432
++ W A K R + H V SVAF N +GS D+TI +W+ +A
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATG 202
Query: 433 XYTIXDDGHSDWVSCVRFSPNH 498
+ GH V + S H
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRH 224
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 61.3 bits (142), Expect = 4e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 379 VSGSRDKTIXLWNT-LAECXYTIXDDGHSDWVSCVRFSPNH 498
+SGS D I LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
+S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T
Sbjct: 48 VSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTT 106
Query: 403 IXLWNTLAECXYTIXDDGHSDWVSCV 480
+ W+ L++ T HSD+V+C+
Sbjct: 107 VKTWDGLSDGVCTRTLRQHSDYVTCL 132
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXY-TIXDDGHSDWVS 474
DVL + S D + +GSRD T+ W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 61.3 bits (142), Expect = 4e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 379 VSGSRDKTIXLWNT-LAECXYTIXDDGHSDWVSCVRFSPNH 498
+SGS D I LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
+S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T
Sbjct: 48 VSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTT 106
Query: 403 IXLWNTLAECXYTIXDDGHSDWVSCV 480
+ W+ L++ T HSD+V+C+
Sbjct: 107 VKTWDGLSDGVCTRTLRQHSDYVTCL 132
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXY-TIXDDGHSDWVS 474
DVL + S D + +GSRD T+ W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 373 QIVSGSRDKTIXLWNTL-AECXYTI 444
Q+ S + D I W+T+ YTI
Sbjct: 533 QLASSTLDGQINFWDTIEGVLMYTI 557
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 379 VSGSRDKTIXLWN 417
+S S D T+ W+
Sbjct: 407 LSASLDGTVRAWD 419
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 373 QIVSGSRDKTIXLWNTL-AECXYTI 444
Q+ S + D I W+T+ YTI
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTI 597
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 379 VSGSRDKTIXLWN 417
+S S D T+ W+
Sbjct: 447 LSASLDGTVRAWD 459
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 60.1 bits (139), Expect = 9e-10
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
KL L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 214 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 379 VSGSRDKTIXLW 414
VS S D+T+ W
Sbjct: 127 VSSSVDQTLKRW 138
Score = 49.2 bits (112), Expect = 2e-06
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Frame = +1
Query: 49 LRGHNGWVTQIATNP---KYPD-MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 216
L GH +V +A P +YP+ ++S S D + VW L EN + L GH +
Sbjct: 62 LLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENI-----QTLKGHQMQV 116
Query: 217 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
+ V + D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D
Sbjct: 117 TGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
Query: 397 KTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
++ LW T+ GH+D V + P+
Sbjct: 172 ASLKLWKGKTS-LQTL--SGHTDTVRGLAVMPD 201
Score = 34.7 bits (76), Expect = 0.038
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED---- 327
D N Y + + L+GH + + + +D N A S S D+T+R+W L + +
Sbjct: 6 DFNEYKL-RCELHGHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILL 63
Query: 328 -HTKDVLSVAF-----SVDNRQIVSGSRDKTIXLWNTL 423
HT V +A+ ++VSGS D + +WN +
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLM 101
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 60.1 bits (139), Expect = 9e-10
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
KL L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 214 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 379 VSGSRDKTIXLW 414
VS S D+T+ W
Sbjct: 127 VSSSVDQTLKRW 138
Score = 49.2 bits (112), Expect = 2e-06
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Frame = +1
Query: 49 LRGHNGWVTQIATNP---KYPD-MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 216
L GH +V +A P +YP+ ++S S D + VW L EN + L GH +
Sbjct: 62 LLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENI-----QTLKGHQMQV 116
Query: 217 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
+ V + D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D
Sbjct: 117 TGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
Query: 397 KTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
++ LW T+ GH+D V + P+
Sbjct: 172 ASLKLWKGKTS-LQTL--SGHTDTVRGLAVMPD 201
Score = 34.7 bits (76), Expect = 0.038
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED---- 327
D N Y + + L+GH + + + +D N A S S D+T+R+W L + +
Sbjct: 6 DFNEYKL-RCELHGHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILL 63
Query: 328 -HTKDVLSVAF-----SVDNRQIVSGSRDKTIXLWNTL 423
HT V +A+ ++VSGS D + +WN +
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLM 101
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
++W++ K + H + V FSVD +V+ S D T LW+ A + H
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 460 SDWVSC 477
V C
Sbjct: 296 KATVCC 301
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 354
S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 42.7 bits (96), Expect = 1e-04
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +1
Query: 100 PDMILSS-SRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 276
P +IL++ S D T+ W+ Y Q Y SH ++ + ++ D +Y L+ + +
Sbjct: 4 PSVILATASYDHTIRFWE-AETGRCYRTIQ---YPDSH-VNRLEITPDKHY-LAAACNPH 57
Query: 277 LRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
+RL+D+ + + ++ HT +V++V F D + + SGS D T+ +W+ A
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA 109
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H++ + V D + SGS D T+++WDL A + +E V +V + +++
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELI 135
Query: 382 SGSRDKTIXLWNTLA 426
SG ++ I +W+ A
Sbjct: 136 SGDQNGNIRVWDLRA 150
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Frame = +1
Query: 55 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIX 408
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 409 LW 414
W
Sbjct: 379 HW 380
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLW 288
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/100 (24%), Positives = 47/100 (47%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH + V + +SG D+ ++LWD +G+ H VLSV ++ + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 379 VSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
++ S+D+ I L++ + GH+ V+ + + P H
Sbjct: 326 LTASKDQIIKLYD-IRTMKELQSFRGHTKDVTSLAWHPCH 364
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L H I +V S + NY +SG TL+ W H + + ++F +
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDL 220
Query: 373 QIVSGSRDKTIXLWN 417
+ S S D T+ +W+
Sbjct: 221 KFCSCSDDTTVKVWD 235
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
I+ V+ + G ++GS LW+ + + H + + S+ +S + +VSG
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 394 DKTIXLW 414
T+ W
Sbjct: 186 GGTLKYW 192
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSG 387
+ D+ S+DG+ L+ +DK ++ WD G+ F + D++Q +++G
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 388
Query: 388 SRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
DK I W+ + T D H V+ + F N+
Sbjct: 389 MSDKKIVQWD-INTGEVTQEYDQHLGAVNTITFVDNN 424
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTL 423
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++ +W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 424 AECXYTIXDDGHSDWVSCVRFSPN 495
+ H + + PN
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPN 466
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/135 (18%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +1
Query: 22 SETLKLXGTLR-GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 198
+ET ++ T G +V ++ + +++L+ DK ++ W + E Q
Sbjct: 355 TETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ---- 410
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 375
H ++ + + ++ S DK+LR+W+ + E H + S++ +
Sbjct: 411 -HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNW 469
Query: 376 IVSGSRDKTIXLWNT 420
+ + S D I +++T
Sbjct: 470 LAAQSLDNQILIYST 484
Score = 30.3 bits (65), Expect = 0.82
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH--SHFISDVVL 231
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIX 408
S DG + +SG + WD + K R + H + + ++ ++ + D I
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIK 570
Query: 409 LWN 417
W+
Sbjct: 571 YWD 573
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +1
Query: 67 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 243
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
L+ ++ +R WD+ +G +E +S + D + I++G D++I +W+
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKD---VLSVA 354
+RL I+ LS+D Y L ++ +RLW++ K R++ H + + S
Sbjct: 437 ERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCF 496
Query: 355 FSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
I SGS D + +W+ + + GH+ V+CV +SP +
Sbjct: 497 GGYKQAFIASGSEDSQVYIWHR-STGKLIVELPGHAGAVNCVSWSPTN 543
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 97 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 270
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 271 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ L+D A T R + + S + S DN+ I+ ++ I LWN
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWN 471
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSV 363
L H+ + + S +G Y S S D+T +W+++A H K V+++ +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 364 DNRQIVSGSRDKTIXLWNT-LAECXYTIXDDGHSDWVSC 477
D+RQ+++ ++ I W+ +C + G S +SC
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISC 367
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 304 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDD--GHSDWVSC 477
+T + E HT +V + FS + + + S S+D+T +W A+ ++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 478 VRFSPN 495
+ +SP+
Sbjct: 325 ILWSPD 330
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIXLW 414
+ SGS D + +W + GK H V V++S N + S S D TI +W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 208 HFISDVVLSSDGN 246
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 58.0 bits (134), Expect = 4e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +1
Query: 16 KMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ--K 189
K+ ET + T GH G V + +P ++ S S D T +W + + + + + K
Sbjct: 434 KIGET-RPAKTFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 190 RLYGHSHFISDVVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 363
+Y + ++ S S+D T++LWD GK F H + V S+AFS
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 364 DNRQIVSGSRDKTIXLWN 417
+ I SGS DK+I +W+
Sbjct: 552 NGEYIASGSLDKSIHIWS 569
Score = 45.6 bits (103), Expect = 2e-05
Identities = 38/153 (24%), Positives = 69/153 (45%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
DV ++ ++A S S D + L + + + F H +V V + + S S
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSD 468
Query: 394 DKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
D T +WN + + + H+ + +R+SP
Sbjct: 469 DSTAKIWN-IKQSTFVHDLREHTKEIYTIRWSP 500
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = +1
Query: 88 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 267
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 562 DKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE--------NNYGIPQKRLYGH 204
L GH V A +P ++ S S D T +W + N + K G
Sbjct: 261 LEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 319
Query: 205 SHFISDVVLSSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
S+ S V + D G +GS D R+W L G+ H + S+ ++
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 373 QIVSGSRDKTIXLWNTLAE 429
+++GS D+T +W+ AE
Sbjct: 379 YLLTGSVDRTAVVWDVKAE 397
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 313 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
R E HT +V + A+S + SGS D T +W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/107 (28%), Positives = 50/107 (46%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
KRL GH + + +L G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 367 NRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATP 507
N I S S D I +W ++ GH+ V+ + FSP +P
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSP 344
Score = 33.9 bits (74), Expect = 0.067
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 147
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 30.3 bits (65), Expect = 0.82
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +1
Query: 175 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 354
G P++R+ ++ + S D + L+ D + +W+ + G HT +
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMD 593
Query: 355 FSVDNRQI-VSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
N +I +S D +W+ I D H V +FSP+ + +L
Sbjct: 594 VHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVD-GKFSPDGTSIIL 646
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 57.2 bits (132), Expect = 6e-09
Identities = 34/123 (27%), Positives = 60/123 (48%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
++SD S D+ + WD++ G+ R+F H +V +V F+ + +VS D+++
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 409 LWN 417
+W+
Sbjct: 128 VWD 130
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/99 (28%), Positives = 49/99 (49%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH + + DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFS 489
+ S D+ + W+ ++ GH V+ V+F+
Sbjct: 74 KFCSCGGDRQVYYWD-VSTGRVIRKFRGHDGEVNAVKFN 111
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 387
++ + +S+DGN L+G D TLRL D G+ + ++ H + N ++ G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 388 SRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
S D + W+ L + H V+ V + P
Sbjct: 247 SEDGLVFFWD-LVDAKVLSKFRAHDLVVTSVSYHP 280
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 304 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
K + H VL+ F+ D ++ +D+TI LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 56.8 bits (131), Expect = 8e-09
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK-DV--LSVAFSVDNRQIVS 384
+ V + + Y +S S D T +DL++G + D ++ DV + AF D + +
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 385 GSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
G+ + +W+ ++ GH+ ++ + FS N
Sbjct: 372 GTAQSIVKIWDVKSQAN-VAKFGGHNGEITSISFSEN 407
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 211 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
F D++ S D +G D T L+D +G+ H+K V S+ F D +++ S
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 391 RDKTIXLWNTLAECXYT 441
DKT+ +W + YT
Sbjct: 284 SDKTVRIWGCSEDGNYT 300
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
K+L GH + + + G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 367 NRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHAT 504
N + S S D I +W ++ GH+ V+ + FSP A+
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVL-RGHTGAVTAIAFSPRQAS 403
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWK------LTR----DENNYGIPQKR 192
LRGH G VT IA +P+ + +LSSS D T +W L R ++
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
SH I +++G ++GS D R+W
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 6e-08
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
++W+L K + H + V FS+D +V+ S D T LW+ A
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +1
Query: 169 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 348
N IP + H+ + V G+ SGS D ++++WDL + R F V +
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNT 130
Query: 349 VAFSVDNRQIVSGSRDKTIXLWNTLAE 429
V + +++SG ++ I +W+ A+
Sbjct: 131 VVLHPNQTELISGDQNGNIRVWDLRAD 157
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +1
Query: 100 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
P + ++S D+T+ +W+ + L+ ++ + L+ + L + + +
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSFRYPDLH-----VNRLELTPEKG-KLVAACNPHI 63
Query: 280 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN-TLAEC 432
RL+DL + R F HTK+V++V F + SGS D ++ +W+ + EC
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVREC 118
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/150 (23%), Positives = 66/150 (44%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
S DG SG D ++++D ++G + + V + +++GS D ++
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 406 XLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
+WN E Y GH+ V+C F+P+
Sbjct: 180 WMWNADKEA-YLNMFSGHNLNVTCGDFTPD 208
Score = 47.2 bits (107), Expect = 7e-06
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTI 405
S+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 406 XLWN 417
+W+
Sbjct: 312 IIWD 315
Score = 46.8 bits (106), Expect = 9e-06
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +1
Query: 10 FSKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 189
F S TLK L G + + +P+ ++L+ S D +L +W D+ Y
Sbjct: 140 FDASSGTLKC--VLDGPGAGIEWVRWHPR-GHIVLAGSEDCSLWMWNA--DKEAY---LN 191
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFS 360
GH+ ++ + DG +GS D +L +W+ ++ + H T+ + + +
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDIN 251
Query: 361 VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHAT 504
++ +SGS+D ++ + N + + + H+D V CV+FSP+ AT
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNS-HTDSVECVKFSPSSAT 298
Score = 40.7 bits (91), Expect = 6e-04
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSS--RDKTLIVWKLTRDENNYGIPQKRLYG 201
T K+ +L H V + +P + L+++ DK LI+W L + +
Sbjct: 273 TGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF------ICE 326
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H ++ + Y +G + T+ +WD G + H V +++ S + IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 382 SGSRDKTIXLWNT 420
S S D T ++ +
Sbjct: 387 SVSVDNTARVFES 399
Score = 35.1 bits (77), Expect = 0.029
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
DEN+ + GH + + S +D +G D LW + G H
Sbjct: 57 DENDDSV--HTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKD 114
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
V +AFS D + + SG D + +++ + + DG + VR+ P
Sbjct: 115 SVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL-DGPGAGIEWVRWHP 165
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 53.2 bits (122), Expect = 1e-07
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH V + + ++S++ D+T+ +W L + G + S+ + +
Sbjct: 310 TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN-CNAI 363
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
LS DG SG D LRLWD+ GK H+ V SV+ S + +I++ RD
Sbjct: 364 CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 423
Query: 406 XLWNT-LAECXYTIXDDGH---SDWV-SCV 480
+++T E T+ G+ S+W SC+
Sbjct: 424 NVFDTRTLEICGTLRASGNRLASNWSRSCI 453
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWN 417
D+++G+ HT V +V S +R +VS + D+TI LW+
Sbjct: 301 DVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 369
R++ H +V + +G D+ +++WD +G + ++L +A + DN
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 370 RQIVSGSRDKTIXLWN-TLAECXYTIXDDGHSDWVSCV---RFSPNH 498
+ +++ + + +W+ + +T+ GH+D V V +FS H
Sbjct: 286 KSVIAATSSNNLFVWDVSSGRVRHTL--TGHTDKVCAVDVSKFSSRH 330
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 53.2 bits (122), Expect = 1e-07
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 234
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXL 411
G+ S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+ +
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSPN 495
W+ + +GH V V+FSP+
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPH 247
Score = 47.6 bits (108), Expect = 5e-06
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIV-SGSRDK 399
D + S DKT+++WD+ + + H V V FS R ++ S S D
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 400 TIXLWNTLAECXYTIXDDGHSDW 468
++ LW+ + E D H+++
Sbjct: 260 SVCLWDYMVEDALVGRYDHHTEF 282
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 52.8 bits (121), Expect = 1e-07
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = +1
Query: 172 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 342
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + + F H V
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYV 371
Query: 343 LSVAFS-VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
SV F+ V+ +SGS D + +WN ++ C D D +S V + P+
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWN-ISGCSVVDWAD-LKDIISAVCYRPD 421
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 232 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTI 405
+ + NY +SGS D +R+W++ +G + + D KD++S V + D + + GS + +
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQGGIIGSLNGSC 434
Query: 406 XLWNTLAE 429
+N E
Sbjct: 435 RFFNMSGE 442
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 282
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
+WD+ + + F H V + F ++ SGS D+T+ +WN + + + + GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKAFITENHGH 305
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------RFE 324
H + V LS D + S S D T+ WD+++GKT + R +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 325 DHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRF 486
+H+++ L++A S D R + +G D+ + +W+ + GH + VSC+ F
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCF 272
Score = 34.7 bits (76), Expect = 0.038
Identities = 28/123 (22%), Positives = 54/123 (43%)
Frame = +1
Query: 127 DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 306
D+ + +W + E+ P GH + +S + + SGS+D+T+++W++
Sbjct: 243 DRHVHIWDVRTREHVQAFP-----GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 307 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRF 486
H ++L++ R + G RD+T+ L++ + E I S SC
Sbjct: 298 FITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPESTRMIYRAPASSLESCCFI 355
Query: 487 SPN 495
S N
Sbjct: 356 SDN 358
Score = 29.1 bits (62), Expect = 1.9
Identities = 30/119 (25%), Positives = 52/119 (43%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+ S S D+T+ VW + E+ I + +GH I + + AL+ D+T+ L+
Sbjct: 279 LYSGSFDRTVKVWNV---EDKAFITEN--HGHQGEIL-AIDALRKERALTVGRDRTM-LY 331
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSD 465
T + + S F DN + +SGS + T+ LW L + + + H D
Sbjct: 332 HKVPESTRMIYRAPASSLESCCFISDN-EYLSGSDNGTVALWGMLKKKPVFVFKNAHQD 389
Score = 27.1 bits (57), Expect = 7.7
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENN-YGIPQKRLYGHSHFISDVVL 231
GH G + I K + L+ RD+T++ K+ Y P L FISD
Sbjct: 304 GHQGEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCC-FISD--- 357
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 342
N LSGS + T+ LW + K F++ +D+
Sbjct: 358 ----NEYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 52.4 bits (120), Expect = 2e-07
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWN- 417
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++ LWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 418 TLAECXYTIXDDGHSDWVSCVRFSP 492
C TI + + V CV+FSP
Sbjct: 827 NERNCLGTIRNIAN---VCCVQFSP 848
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
I + +++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 394 DKTIXLWNTL 423
D +I +W+ +
Sbjct: 141 DGSIRVWSLI 150
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL---------AAGKT--TRRFEDHT 333
K+ +GH ++ +V S D + +SGS D ++R+W L G T F +HT
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 334 KDVLSVAFSVD--NRQIVSGSRDKTIXLWN 417
V + N I+S S D+T +W+
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
Score = 31.9 bits (69), Expect = 0.27
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
+I+SSS D+T VW L+R G K + S I+ + L G +G+ D + +
Sbjct: 189 VIISSSEDRTCKVWSLSR-----GKLLKNIIFPS-VINALALDPGGCVFYAGARDSKIYI 242
Query: 286 WDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ A + + K + +A+ D ++SGS D + +W+
Sbjct: 243 GAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 51.6 bits (118), Expect = 3e-07
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQ 375
+ V S DG +GS D+T+RLWDL + +H V SVAF V +
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGR 305
Query: 376 IVSGSRDKTIXLWN 417
+ S S DK++ L++
Sbjct: 306 LASVSDDKSVSLYD 319
Score = 35.5 bits (78), Expect = 0.022
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +1
Query: 73 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 252
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIXLWNT 420
S S D +R++D+ T E +V + F + V+G ++ LW+T
Sbjct: 76 ASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDT 132
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 153
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 232 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
+ D NY +SGS D +R+WD++ + + D + V ++ + D + V GS
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECR 471
Query: 409 LWNT 420
++T
Sbjct: 472 FYHT 475
Score = 50.0 bits (114), Expect = 9e-07
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
PQ GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFN 413
Query: 361 -VDNRQIVSGSRDKTIXLWN 417
VD+ +SGS D + +W+
Sbjct: 414 PVDDNYFISGSIDGKVRIWD 433
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 51.2 bits (117), Expect = 4e-07
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Frame = +1
Query: 103 DMILSSSRDKTLI-VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
D S+ RD T V K ++N P R + I+ + S+DG Y + D L
Sbjct: 271 DSSFSAIRDPTQFSVDKAKYSKSN---PVARWHIGQGAINSIAFSNDGAYLATVGRDGYL 327
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
R++D + K + + +L A+S+D + +++G D + +W+ + + +GH
Sbjct: 328 RIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAWGEGH 386
Query: 460 SDWVSCVRFSPNHATP 507
+ WVS V F ++P
Sbjct: 387 NSWVSGVAFDSYWSSP 402
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 50.8 bits (116), Expect = 5e-07
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 61 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 234
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXL 411
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D + +
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 412 WN 417
W+
Sbjct: 536 WS 537
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 285
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 286 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
W + + + D + V + ++ D + + GS T L+NT
Sbjct: 536 WSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT 579
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
F H DVL +++S ++ ++S S DKT+ LW+ ++ + HSD+V+C++F+P
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSSKTCLKVFS--HSDYVTCIQFNP 518
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 237
H+ +VT I NP + +S S D + +W + ++ + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIP---DHQVVDWNDLH---EMVTAACYTP 560
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 339
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 50.0 bits (114), Expect = 9e-07
Identities = 25/98 (25%), Positives = 50/98 (51%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
I+ + S+DG + + D LR++D K + + +L ++S+D + I++G
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 394 DKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATP 507
D + +W+ + + +GH+ WVS V F N ++P
Sbjct: 366 DDLVQVWS-MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 9e-07
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
F+ H DVL +A+S ++ ++S S DKT+ LWN ++ + HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQTCLKVFS--HSDYVTCIQFNP 563
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +1
Query: 130 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAAG 303
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS- 543
Query: 304 KTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWN 417
+T + H+ V + F+ VD+R +SGS D + +W+
Sbjct: 544 QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 42.7 bits (96), Expect = 1e-04
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 FXPFSKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 180
F P S + K + +GH V +A + +LSSS DKT+ +W L+
Sbjct: 493 FVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDKTVRLWNLSSQ------ 544
Query: 181 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 357
+++ HS +++ + + D Y +SGS D +R+W + + ++ H + V S +
Sbjct: 545 TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACY 603
Query: 358 SVDNRQIVSGS 390
+ D + ++ GS
Sbjct: 604 TPDGQGVLVGS 614
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 50.0 bits (114), Expect = 9e-07
Identities = 26/117 (22%), Positives = 54/117 (46%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 249
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
SG DK ++W L +G H + ++A+ + +GS DKT+ W+T
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.0 bits (114), Expect = 9e-07
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P + LYGH+ + D+ S D N LS S DKT+RLW + F H V V F+
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFN 321
Query: 361 -VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
V+ SGS D +W L+E D D +S + + PN
Sbjct: 322 PVNKNNFASGSIDGKARIWG-LSEERVVAWTDVR-DSISAISYQPN 365
Score = 37.1 bits (82), Expect = 0.007
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 229 LS--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 387
+ + N+A SGS D R+W L+ + + D + ++++ + V G
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLSEERVV-AWTDVRDSISAISYQPNGNGFVVG 372
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 49.6 bits (113), Expect = 1e-06
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = +1
Query: 112 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 282
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
LW + + R F H V VAF+ VD+ +SGS D + +W+ + C D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 460 SDWVSCVRFSPN 495
D V+ V + P+
Sbjct: 404 RDIVTAVCYRPD 415
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 232 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 49.6 bits (113), Expect = 1e-06
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = +1
Query: 112 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 282
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
LW + + R F H V VAF+ VD+ +SGS D + +W+ + C D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 460 SDWVSCVRFSPN 495
D V+ V + P+
Sbjct: 404 RDIVTAVCYRPD 415
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 232 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 49.6 bits (113), Expect = 1e-06
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Frame = +1
Query: 31 LKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 210
L+ +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 211 FISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQI 378
++ + L+ DG+ SGS D+++ +W D + R H K +LS+ F+V + +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD-LL 339
Query: 379 VSGSRDKTIXLWNTLAECXYTIXD--DGHS 462
+SGS D+T+ +W + Y+ + GH+
Sbjct: 340 LSGSADRTVRIWRRGPDSSYSCLEVLSGHT 369
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 184 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
+KRL+ H+ ++ + +S DG + S SWDKTL++W + + + H V ++A S
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS 244
Query: 361 VDNRQIVSGSRDKTIXLW 414
N + +GS D+ I +W
Sbjct: 245 T-NGTVYTGSADRRIRVW 261
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/118 (26%), Positives = 61/118 (51%)
Frame = +1
Query: 61 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 240
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+ +W
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 312
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H +S + LS DG S SWD+TL++W K F + D ++ +N I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 382 SGSRDKTIXLW 414
+GS D+ I +W
Sbjct: 224 TGSSDQRIKVW 234
Score = 42.7 bits (96), Expect = 1e-04
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 216
L L HN + +A + ++ S D +++VW+ RD+ + L GH+ +
Sbjct: 251 LVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESV 308
Query: 217 SDVVLSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ--- 375
+ + SD SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 309 LCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADE 365
Query: 376 ----IVSGSRDKTIXLWNTL 423
I SG D + +W L
Sbjct: 366 ASYHIYSGGLDSQVKVWQVL 385
Score = 41.9 bits (94), Expect = 3e-04
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLS-SDGNYALSGSWD 270
I + S D+ + VW+ +E N +K L H+ I+ + LS ++G+ SG D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 271 KTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYT 441
++ +W+ G HT+ VL +A D + SGS DKT+ LW A+
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSC 339
Query: 442 IXD-DGHSDWVSCV 480
+ +GH V C+
Sbjct: 340 LAMLEGHLGPVKCL 353
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 328 HTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
H V +A S D + S S D+T+ +W T + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSEN 219
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
LRGH V ++ N ++ + RDK++ +W++ +E++ L GHS + V+
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 229 LSSDGNYALSGSWDKTLRLW-------DLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVS 384
+ S S+D T+++W D +T + H+ V S++F+ ++V+
Sbjct: 147 WHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVT 206
Query: 385 GSRDKTIXLWNT 420
S D + +W T
Sbjct: 207 CSDDLAVKIWKT 218
Score = 37.5 bits (83), Expect = 0.005
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK---LTR-------------DEN---- 168
L GH V +A NP +I S S DKT+ +W+ LTR D N
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 169 -NYGIPQKR---LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK-----TTRRF 321
N+ + L GH + V ++ G+ + DK++ +W++ + T
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 322 EDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE-----CXYTIXD--DGHSDWVSCV 480
H++DV V + + S S D TI +W + E C T+ + +GHS V +
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSI 195
Query: 481 RFS 489
F+
Sbjct: 196 SFN 198
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/89 (31%), Positives = 41/89 (46%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH+ + D+ S D + SGS D T+ +W++ G T H V V +
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
I S S DKT+ +W T ++ DGH
Sbjct: 174 FIASQSDDKTVIIWRT-SDWGMAHRTDGH 201
Score = 41.9 bits (94), Expect = 3e-04
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 357
+ V G++ S S DKT+ +W + R + H L F
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 289 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDW 468
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 469 VSCVRFSP 492
V V + P
Sbjct: 163 VKGVTWDP 170
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/150 (24%), Positives = 69/150 (46%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
+L TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 393
+S V + S G L+ + D T+++WD+ + +LS+ + + + R
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGR 1000
Query: 394 DKTIXLWNTLAECXYTIXDDGHSDWVSCVR 483
D +W+ + GH+ W+ +R
Sbjct: 1001 DTVANIWD-IRSGKQMHKLKGHTKWIRSIR 1029
Score = 42.7 bits (96), Expect = 1e-04
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
S +S S G A +G D +WD+ +GK + + HTK + S+ D +++
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LIT 1037
Query: 385 GSRDKTIXLWN-TLAECXYTIXDDGHSDWVSCVRFSP 492
GS D T +W+ + C + H+ V V +SP
Sbjct: 1038 GSDDWTARVWSVSRGSCDAVLA--CHAGPVQSVEYSP 1072
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 412 WNTLAECXYTIXD-DGHSDWVSCVR 483
W+ + + + GH VSCV+
Sbjct: 924 WD--KQTTQLLEELKGHDSQVSCVK 946
Score = 35.1 bits (77), Expect = 0.029
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +1
Query: 49 LRGHNGWVTQI--ATNPKYPDMI---------LSSSRDKTLIVWKLTRDENNYGIPQKRL 195
L+GH G VT + T + D++ +S S D + +W + + + L
Sbjct: 839 LKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSEL---RATL 895
Query: 196 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 375
GH+ + +SSD +SGS D ++ +WD + + H V V + +
Sbjct: 896 KGHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGER 952
Query: 376 IVSGSRDKTIXLWNTLAE-CXYTI 444
+++ + D T+ +W+ + C T+
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATV 976
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT LW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 379 VSGSRDKTIXLWN 417
++GS D+T LW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 286 WDL 294
WD+
Sbjct: 220 WDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT LW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 36.7 bits (81), Expect = 0.009
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 286 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 396
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 379 VSGSRDKTIXLWN 417
++GS D+T LW+
Sbjct: 68 ITGSADQTAKLWD 80
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT LW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 36.7 bits (81), Expect = 0.009
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 286 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 396
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 379 VSGSRDKTIXLWN 417
++GS D+T LW+
Sbjct: 68 ITGSADQTAKLWD 80
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 228
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRD 396
DG G D ++++W L G +R + HT D+ SV FS D R ++S S D
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFD 394
Query: 397 KTIXLWN 417
++ +W+
Sbjct: 395 GSLKVWD 401
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +1
Query: 160 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 291
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNR 372
H+ I+ V SSDG LS S+D +L++WDL K + FE + +VAFS D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 373 QIVSGS 390
I++G+
Sbjct: 432 IILTGT 437
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN-TL 423
+ S +D R+WDL + F+ H K VLSV FS + + SG D +W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 424 AECXYTIXDDGHSDWVSCVRFSP 492
+ Y I H + VS V++ P
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEP 224
Score = 37.9 bits (84), Expect = 0.004
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 295 AAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIXLWN 417
K H V V + R + + S D + +W+
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +1
Query: 196 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-V 363
+G ++ LS DG ++ S +LW++ + T + + H + V V FS V
Sbjct: 60 FGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSV 117
Query: 364 DNRQIVSGSRDKTIXLWNT 420
D+ + + S D+T +W T
Sbjct: 118 DDECLATASTDRTEKIWKT 136
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +1
Query: 16 KMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 192
K ++ +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 373 QIVSGSRDKTIXLW 414
+ S S D+T ++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIP----QKRLYGHSHFISDVVLSSDGNYALSGSWDK 273
++ ++ D + +W + + +P Q L H ++ + S G SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 274 TLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECX 435
L +W L +T + ++ H KDVL + +S D+ ++SGS D + +W+
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 436 YTIXDDGHSDWVSCVRFSP 492
+ I D H +V V + P
Sbjct: 147 HQIL-DAHCHYVQGVAWDP 164
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +1
Query: 16 KMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 192
K ++ +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 373 QIVSGSRDKTIXLW 414
+ S S D+T ++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIP----QKRLYGHSHFISDVVLSSDGNYALSGSWDK 273
++ ++ D + +W + + +P Q L H ++ + S G SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 274 TLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECX 435
L +W L +T + ++ H KDVL + +S D+ ++SGS D + +W+
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 436 YTIXDDGHSDWVSCVRFSP 492
+ I D H +V V + P
Sbjct: 147 HQIL-DAHCHYVQGVAWDP 164
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQ 375
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V F+ ++
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 376 IVSGSRDKTIXLWN 417
I+SGS D +W+
Sbjct: 287 ILSGSDDNLCKVWD 300
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD-GNYALSGSWDKTLRL 285
+++ S D ++ V+ L + N + R H+ ++ V + + GN LSGS D ++
Sbjct: 244 VVAGSSDDSIYVYDL--EANRVSL---RTVAHTSDVNTVCFADESGNLILSGSDDNLCKV 298
Query: 286 WD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
WD + K H + V + D R +S +D+TI LW+
Sbjct: 299 WDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 237
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 238 DGNYALSGSWDKTLRLWDL 294
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H +S + L+ D SGSWDKTL++W L+ K E H V +V D+ +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVF 302
Query: 382 SGSRDKTIXLW 414
+GS D T+ +W
Sbjct: 303 TGSADGTLKVW 313
Score = 35.1 bits (77), Expect = 0.029
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 286 WDL-AAGKTTRR-----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIX 447
W GK + V ++A ++ + + GS D T+ W +
Sbjct: 313 WKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGT 372
Query: 448 DDGHSDWVSCV 480
GH V C+
Sbjct: 373 IHGHRMAVLCL 383
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIXL 411
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 31.5 bits (68), Expect = 0.36
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 405
GN+ G+ + ++ +WDL + + + + F+ +NR IV SGS DK +
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 406 XLWN-TLAECXYTIXDDGHSDWVSCVRFSPNHATP 507
+W+ +C T+ + H V V + N+ TP
Sbjct: 240 KVWDVATGKCKVTM--EHHEKKVHAVAW--NNYTP 270
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.6 bits (108), Expect = 5e-06
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 169 NYGIPQKRLYGHSHFISD--VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 342
++ PQ + + S S + ++SDG G D +++L KT H V
Sbjct: 2612 DWQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPV 2671
Query: 343 LSVAFSVDNRQIVSGSRDKTIXLW 414
+A S DN +V+GSRD T+ LW
Sbjct: 2672 TCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 196 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 315
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 153
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 47.6 bits (108), Expect = 5e-06
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD----VLSVAFSVD 366
GHS ++ VV S + L+GS D T R+WD GK + K V S+A
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGS 258
Query: 367 NRQIVSGSRDKTIXLWNTLA-ECXYTIXDDGH 459
+V G + K + LWN A EC TI H
Sbjct: 259 ESWLVCG-QGKNLALWNLPASECVQTIPIPAH 289
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D WD+ +GK F+ H+ + +V QI++GS D T +W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +1
Query: 103 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 279
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 280 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
+WD+ G + + H V VA+ + + S S D+T ++
Sbjct: 78 IIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 304 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVR 483
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 484 FSP 492
+ P
Sbjct: 103 WDP 105
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 282
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
+WDL + + HT V S+ ++ ++S S D TI +W
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVW 323
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 322 EDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW--NTLAECXYTI 444
E H+ +V F+V + + SGS DKTI +W NTL +C T+
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTL 294
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 306
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 47.2 bits (107), Expect = 7e-06
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 396
SSD SG D L +W+ + + RF +H V ++A+S + +++ G+ D
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTAD 358
Query: 397 KTIXLWNT 420
+ I WNT
Sbjct: 359 RCIRFWNT 366
Score = 34.7 bits (76), Expect = 0.038
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I +
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDI 278
Query: 421 LAECXYTIXDDGHSDWVSCVRFSPNH 498
+ + GH + +++S ++
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWSSDN 304
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 214 ISDVVLSSDGNYALS--GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 387
+ ++V S + N +S G + +W H+ VL +A S D + IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 388 SRDKTIXLWN 417
+ D+T+ WN
Sbjct: 441 AGDETLRFWN 450
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 286 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTLAEC 432
WD + G R H V+S+ F +++ S + I W+ A C
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 627
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTI +
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GH+ V + F P
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHP 603
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/149 (23%), Positives = 62/149 (41%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 628 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 682
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 683 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 741
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
LWNT+ T+ GH +S + SP+
Sbjct: 742 LWNTMENKCMTVA--GHECVISALAQSPS 768
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 286 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTLAEC 432
WD + G R H V+S+ F +++ S + I W+ A C
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTI +
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GH+ V + F P
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/149 (23%), Positives = 62/149 (41%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
LWNT+ T+ GH +S + SP+
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSPS 770
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 286 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTLAEC 432
WD + G R H V+S+ F +++ S + I W+ A C
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTI +
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GH+ V + F P
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/149 (23%), Positives = 62/149 (41%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
LWNT+ T+ GH +S + SP+
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSPS 770
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 286 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTLAEC 432
WD + G R H V+S+ F +++ S + I W+ A C
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTI +
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GH+ V + F P
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/149 (23%), Positives = 62/149 (41%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
LWNT+ T+ GH +S + SP+
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSPS 770
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 286 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTLAEC 432
WD + G R H V+S+ F +++ S + I W+ A C
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTI +
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GH+ V + F P
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHP 605
Score = 42.7 bits (96), Expect = 1e-04
Identities = 35/149 (23%), Positives = 62/149 (41%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
LWNT+ T+ GH +S + SP+
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSPS 770
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 150
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 47.2 bits (107), Expect = 7e-06
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Frame = +1
Query: 49 LRGHNGWVTQIATNP--KYPD----MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 210
L GH V +A NP + D ++ S S D T+ +W+ + ++ H+
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 211 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVS 384
+ S G + S+D T +W + E H +V SV+++ + +
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLAT 135
Query: 385 GSRDKTIXLWNTLAECXYTIXD--DGHSDWVSCVRFSP 492
SRDK++ +W L Y GH+ V V++ P
Sbjct: 136 CSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP 173
Score = 37.9 bits (84), Expect = 0.004
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 219
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 220 DVVLSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFED----------HTKDVLSVAFSV 363
+ ++ G+ ++ S D TL++W D+A ++ + H + + S +S
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSR 277
Query: 364 DNRQIVSGSRDKTIXLW-----NTLAECXYTI---XDDGHSDWVSCVRFSPNHATPLL 513
D+ I SG+ D I L+ +++ Y + + H + V+ V++SP LL
Sbjct: 278 DD-IIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLL 334
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/112 (23%), Positives = 51/112 (45%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 249
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+G DK ++W L +G H +A+ +V+GS DKT+
Sbjct: 88 VFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTL 139
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRRFEDH--TKDVLSVAF 357
+R+ I+ + +S DG + + + + LWDLA K +F H +K V+ F
Sbjct: 391 ERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCF 450
Query: 358 -SVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
+D+ I SGS D + +WN + GHS V+CV ++P +
Sbjct: 451 GGLDSSFIASGSEDSQVYIWNLKNTKPLEVL-SGHSMTVNCVSWNPKN 497
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIXLW 414
D ++ SGS D + +W+L K H+ V V+++ N R + S S D+TI +W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFEDHTKDVLSVAFSV 363
L H + + V S+ G Y + S D T +W D + E H V V++S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 364 DNRQIVSGSRDKTIXLWN 417
D+ ++++ + + LW+
Sbjct: 280 DDTKLLTCGNAEVLKLWD 297
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P L GH I D+ S LS S DKT+RLWD+ KT + H V + FS
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFS 555
Query: 361 -VDNRQIVSGSRDKTIXLWN 417
VD +SGS D I +W+
Sbjct: 556 PVDENYFLSGSLDAKIRIWS 575
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 226 VLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
S D NY LSGS D +R+W + + + D + V + ++ D + + GS
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGI 611
Query: 403 IXLWNT 420
++T
Sbjct: 612 CRAYDT 617
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +1
Query: 328 HTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
H +L +++S ++ ++S S DKT+ LW+ + + H+D+V+C++FSP
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLF--AHNDYVTCIQFSP 556
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 46.4 bits (105), Expect = 1e-05
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQI-VSGSRDK 399
S G LS +D T RL+D+ G T+ F ED V V F DN + +SG
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGV--VKFHPDNCNVFLSGGSKG 269
Query: 400 TIXLWNTLA 426
++ LW+ A
Sbjct: 270 SLRLWDIRA 278
Score = 34.3 bits (75), Expect = 0.050
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 43 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 222
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 223 VVLSSDGNYALSGSWDKTLRLWDL 294
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNR 372
H + D+ S G ++GS+D+++R++ G + + HTK V V +S D
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDAT 335
Query: 373 QIVSGSRDKTIXLWNTLA 426
++SGS D + LW A
Sbjct: 336 YVISGSDDTNLRLWKAKA 353
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGK 306
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H +S + L+ + SGSWDKTL++W L+ K + H + +VA D+ +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLF 306
Query: 382 SGSRDKTIXLW 414
+GS D T+ +W
Sbjct: 307 TGSADGTLKVW 317
Score = 36.7 bits (81), Expect = 0.009
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 286 WDL-AAGKTTRRF-----EDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
W GK T+ F V ++A ++ + GS D T+ W
Sbjct: 317 WKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFW 365
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 46.4 bits (105), Expect = 1e-05
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 201
S T+ G GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVLSVAFSV 363
H + D N L+GS D T+RL+D L A G +FE H VL V +S
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP 396
Query: 364 DNRQIV-SGSRDKTIXLWN 417
D + S + D + +W+
Sbjct: 397 DKSSVFGSSAEDGLLNIWD 415
Score = 37.5 bits (83), Expect = 0.005
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGN 246
+T I T+ K I+ + + T ++E+ P+ +GH + DV S +
Sbjct: 253 ITTIGTDSKSSGSIIKQTGEGT------DKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQ 306
Query: 247 YALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIXLWN 417
S D L LWD G T+ + H D+ V ++ D+ I++GS D T+ L++
Sbjct: 307 EFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFD 366
Query: 418 TLAECXYTIXD-----DGHSDWVSCVRFSPNHAT 504
+ +GH V CV++SP+ ++
Sbjct: 367 RRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSS 400
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 216
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 217 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 312
+ + + LSG DK++ LW + TT
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSIQDHITT 255
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R + V+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVN 269
Query: 367 NRQIVSGSRDKTIXLWN 417
N + +G+ +K + ++N
Sbjct: 270 NNFLSAGNANKELTVFN 286
Score = 35.9 bits (79), Expect = 0.017
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Frame = +1
Query: 49 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 222
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRD 396
+ N+ +G+ +K L +++ + G+ ++ FED +V S+ + I G
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED---EVTSMDHDHTGQIIFCGDGQ 320
Query: 397 KTIXLWNTLAECXYTIXDDGHSDWVS-CVRFSPNHATPL 510
T+ Y++ D H+ +S R NH +P+
Sbjct: 321 GTV----------YSVSMDSHTGSLSRSHRHRTNHKSPV 349
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
G Y ++GS D + +DL K T + + H V+ VA++ + S + +W
Sbjct: 416 GEYIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H +S + LS DG+ S SWD++ ++W + K E D ++ + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 382 SGSRDKTIXLWN 417
+GS DK I +WN
Sbjct: 251 TGSADKKIKVWN 262
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Frame = +1
Query: 31 LKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 210
+ + G LRGH + +A D++LS S DK+L VW+ E L GH+
Sbjct: 318 MSVVGALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTK 374
Query: 211 FISDVVLS---SDGN-----YALSGSWDKTLRLWDL 294
+ + +S SD N SGS D +L++W+L
Sbjct: 375 PVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+ + S DK + VW +D+ + + L H ++ + +S DG SG+ D+++ +W
Sbjct: 249 VYTGSADKKIKVWN-KKDKKHSLVAT--LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 289 D-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
+ L G H K ++ +A + D ++SGS DK++ +W
Sbjct: 306 ERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVW 353
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/87 (29%), Positives = 38/87 (43%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
SSDG S DK LW K E+HT + + FS ++ + S DKT+ +
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 412 WNTLAECXYTIXDDGHSDWVSCVRFSP 492
W+ + GHS V+ + F P
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDFHP 746
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 286 WDL-AAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIXLWN 417
WD G + R F H+ V S+ F + + I S D I W+
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWS 765
Score = 29.1 bits (62), Expect = 1.9
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 4/160 (2%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T GH+ VT + +P D+I S D + W + N G + G S I
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI-----NNGSCTRVYKGGSTQIR-- 783
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
G Y L+ S + + D+ + H + SV + + S S D +
Sbjct: 784 FQPRVGKY-LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MV 841
Query: 406 XLW----NTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
+W + EC + + +G+ + SCV F P + + L+
Sbjct: 842 KVWTLGTGSEGECVHELSCNGNK-FQSCV-FHPAYPSLLV 879
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/118 (24%), Positives = 61/118 (51%)
Frame = +1
Query: 61 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 240
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+ +W
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
Score = 35.1 bits (77), Expect = 0.029
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 312
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
++ L L GH VT IA P D + ++S+D+T+ +W
Sbjct: 132 DSFSLLTQLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIW 171
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/141 (24%), Positives = 60/141 (42%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 249
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
+SG D +++W+ + H + +V F +N IVS S D+TI +WN +
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR 125
Query: 430 CXYTIXDDGHSDWVSCVRFSP 492
++ GH+ +V C F P
Sbjct: 126 TCISVL-TGHNHYVMCASFHP 145
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN-TLAECXYTIXDD 453
++LWD G RF++H V V F VSG D I +WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 454 GHSDWVSCVRFSPNHATP 507
GH D++ V+F +H P
Sbjct: 91 GHLDYIRTVQF--HHENP 106
Score = 43.2 bits (97), Expect = 1e-04
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 229 LSSDG-------------NYA---------LSGSWDKTLRLWDLAAGKTTR--RFEDHTK 336
D N+A +SG+ D+ ++LW + K H
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+V SV F IVS S DK+I +W+
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 373 QIVSGSRDKTIXLWN 417
+VS S D+T+ +W+
Sbjct: 149 LVVSASLDQTVRVWD 163
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGK 306
+ +S S D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 159
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/117 (28%), Positives = 52/117 (44%)
Frame = +1
Query: 64 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 243
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
SGS DKT+++WDL + + H V S+ ++ ++S S D TI LW
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLW 377
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 315
L GH + I + L + S S D TL +WD +G+ R
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 49 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 207
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 41.5 bits (93), Expect = 3e-04
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Frame = +1
Query: 1 FXPFSKMSETLKLXG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 156
F P + T K+ LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 157 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 295 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTL--AECXYTIXDDGHSD 465
GK + F + + V + I +G D + +W+ HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 466 WVSCVRF 486
W+S ++
Sbjct: 360 WISACKW 366
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 49 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 207
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 41.5 bits (93), Expect = 3e-04
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Frame = +1
Query: 1 FXPFSKMSETLKLXG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 156
F P + T K+ LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 157 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 295 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTL--AECXYTIXDDGHSD 465
GK + F + + V + I +G D + +W+ HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 466 WVSCVRF 486
W+S ++
Sbjct: 360 WISACKW 366
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 282
+I + D L VW + + P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
LWDL + H VLS + +VSG D + + + +A
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
H+ +S + L+ + S SWD+T+++W +A K H V SV S +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 382 SGSRDKTIXLWNTLAECXYT 441
SGS D T+ W + YT
Sbjct: 264 SGSADGTVKAWKRDQQGKYT 283
Score = 38.7 bits (86), Expect = 0.002
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
++ S+S D+T+ VW++ + IP H ++ VV +++ SGS D T++
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIP-----AHDDAVNSVVSTTEA-IVFSGSADGTVKA 273
Query: 286 WDL-AAGKTTRR--FEDHTKD---VLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIX 447
W GK T+ + TK V ++A S + + GS D + W + Y
Sbjct: 274 WKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGI 333
Query: 448 DDGHSDWVSCV 480
GH V C+
Sbjct: 334 LKGHKLAVLCL 344
Score = 31.1 bits (67), Expect = 0.47
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 11/137 (8%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 216
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 217 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ----- 375
+ + L G+ SGS DKT+ +W T HT V +A D
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRD 399
Query: 376 ----IVSGSRDKTIXLW 414
+ SGS DK++ +W
Sbjct: 400 KKWIVYSGSLDKSVKVW 416
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 163 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F H
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFA-HND 560
Query: 337 DVLSVAFS-VDNRQIVSGSRDKTIXLWN 417
V V F+ +D +SGS D I +WN
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
F H DVL +++S ++ ++S S DKT+ LW+ + + H+D+V+CV+F+P
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLKLF--AHNDYVTCVQFNP 569
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 282
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQSC------LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+W++ + + + D + V +V ++ D + GS
Sbjct: 586 IWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGS 620
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L HN +VT + NP D +S S D + +W ++ N + L ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVC 608
Query: 229 LSSDGNYALSGSWDKTLRLW 288
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 196 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 375
+ H IS + LS D SGSWDKT ++W ++ + H +D ++ S +
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGL 266
Query: 376 IVSGSRDKTIXLW 414
+ +GS D T+ +W
Sbjct: 267 VFTGSADGTVKVW 279
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 249
VT IA + ++ S D T+ W+ + N G+ L GH ++ + L + GN
Sbjct: 303 VTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVLCLVAAGNL 355
Query: 250 ALSGSWDKTLRLW 288
SGS D +R+W
Sbjct: 356 MFSGSADLGIRVW 368
Score = 28.3 bits (60), Expect = 3.3
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = +1
Query: 103 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 282
D I + +D + VWK E+N R G + D + +S + S+ R
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESNV----HRRVGTMPNLLDYIRNS----IVPSSYFNFTR 198
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTL-AECXYTIXDDGH 459
+A R H + +A S D R + SGS DKT +W C ++ + H
Sbjct: 199 RNRSSAALGFR----HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESV--NAH 252
Query: 460 SDWVSCV 480
D V+ V
Sbjct: 253 EDAVNAV 259
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 339
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
Query: 340 VLSVAFSVDNRQIVSGSRDKTIXLWN 417
V +V++ + GS + +++
Sbjct: 593 KNFVGLTVNSEYLACGSETNEVYVYH 618
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWNT 420
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D + +W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 421 LAECXYTIXDDGHSDWVSCVRFSP 492
E I D ++ + CV+++P
Sbjct: 494 RQEAS-VINIDMKAN-ICCVKYNP 515
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 427 E 429
E
Sbjct: 152 E 152
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 97 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 267
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 268 DKTLRLWD 291
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
D S +G + +SGS D + W + +GK + + + + + V+GS +
Sbjct: 255 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 313
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 247 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 427 E 429
E
Sbjct: 149 E 149
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 97 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 267
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 268 DKTLRLWD 291
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 396
D S +G + +SGS D + W + +GK + + + + + V+GS +
Sbjct: 252 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 310
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 44.0 bits (99), Expect = 6e-05
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH V +A N + S S D+T +W + + L GH+ + +
Sbjct: 17 QGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 232 S-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
+ + S DK++RLWD +GK T++ E +++ ++ + D + G+RD +
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELT 133
Query: 409 L 411
+
Sbjct: 134 I 134
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 310 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXD---DGHSDWVSCV 480
+R ++ H K V SVA++ + ++ SGS D+T +WN D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 481 RFSPNHA 501
+ P H+
Sbjct: 73 CWDPKHS 79
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVD 366
GH + V +S+G SGS D+T R+W++ ++ + HT V + +
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 367 NRQIV-SGSRDKTIXLWN 417
+ +V + S DK++ LW+
Sbjct: 78 HSDLVATASGDKSVRLWD 95
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 318
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P L H+ + + G Y GS D + LWD++ R F V +++F+
Sbjct: 183 PLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFN 242
Query: 361 VDNRQIVSGSRDKTIXLWN 417
I S S D I + N
Sbjct: 243 YSGEYIASASEDLFIDIAN 261
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 44.0 bits (99), Expect = 6e-05
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 361 -VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
VD+ +SGS D + +W+ ++C D V+ V + P+
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPD 449
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +1
Query: 304 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVR 483
K F H+ D+L +++S +NR ++S S D ++ LW C + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 484 FSP 492
F+P
Sbjct: 404 FNP 406
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 159
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 343 LSVAFSVDNRQIVSGSRDKTIXLWN 417
+S +F+ D + IVS D ++ +WN
Sbjct: 539 ISASFTADGKHIVSACDDSSVYVWN 563
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 44.0 bits (99), Expect = 6e-05
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 361 -VDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
VD+ +SGS D + +W+ ++C D V+ V + P+
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPD 449
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +1
Query: 304 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVR 483
K F H+ D+L +++S +NR ++S S D ++ LW C + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 484 FSP 492
F+P
Sbjct: 404 FNP 406
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 159
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 343 LSVAFSVDNRQIVSGSRDKTIXLWN 417
+S +F+ D + IVS D ++ +WN
Sbjct: 535 ISASFTADGKHIVSACDDSSVYVWN 559
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 44.0 bits (99), Expect = 6e-05
Identities = 29/113 (25%), Positives = 53/113 (46%)
Frame = +1
Query: 76 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 255
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 256 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
S SWD T+++W +A K H + SV D+ + +GS D T+ +W
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVW 303
Score = 35.5 bits (78), Expect = 0.022
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHS 207
K ++ H+ + + + + D++ + S D T+ VWK L + + Q L
Sbjct: 268 KCLESIHAHDDAINSVMSG--FDDLVFTGSADGTVKVWKRELQGKGTKHTLAQV-LLKQE 324
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVS 384
+ ++ + + S + GS D + W+ + T + H VL + + ++S
Sbjct: 325 NAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIA--GNLLLS 382
Query: 385 GSRDKTIXLW 414
GS DK I +W
Sbjct: 383 GSADKNICVW 392
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 44.0 bits (99), Expect = 6e-05
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 396
S D SG D L +W+ + + ++ +HT V ++A+S +++ G+ D
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 401
Query: 397 KTIXLWNT 420
+ I WNT
Sbjct: 402 RCIRFWNT 409
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 328 HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
HT VL +A S D + IV+G+ D+T+ WN
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWN 493
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I +
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDI 321
Query: 421 LAECXYTIXDDGHSDWVSCVRFS 489
+ + GH V +++S
Sbjct: 322 RCQEDHVSKLAGHKSEVCGLKWS 344
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXLWN 417
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++ LW+
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Score = 35.5 bits (78), Expect = 0.022
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +1
Query: 88 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS-GS 264
+P P +S S D ++ +W + ++ + G ++ ++ + V SS N+ L+ GS
Sbjct: 817 SPSDPTKFVSGSDDCSVKLWSIN-EKRSLGT----IWSPAN-VCCVQFSSYSNHLLAFGS 870
Query: 265 WDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D + +DL KT H K V V F +D+ IVS S D ++ LWN
Sbjct: 871 ADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 43.6 bits (98), Expect = 8e-05
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN-TLAECXYTIXDD 453
++LWD G RF++H V V F VSG D I +WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 454 GHSDWVSCVRF 486
GH D++ V+F
Sbjct: 91 GHLDYIRTVQF 101
Score = 43.6 bits (98), Expect = 8e-05
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
TL GH ++ + + +YP I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAA 300
+ +S S D+T+R+WD+ A
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/141 (24%), Positives = 59/141 (41%)
Frame = +1
Query: 70 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 249
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
+SG D +++W+ + H + +V F + IVS S D+TI +WN +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
Query: 430 CXYTIXDDGHSDWVSCVRFSP 492
++ GH+ +V C F P
Sbjct: 126 TCVSVL-TGHNHYVMCASFHP 145
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH+ V A +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 229 LSSDGNYALSGSWDKTLRLWD 291
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 373 QIVSGSRDKTIXLWN 417
+VS S D+T+ +W+
Sbjct: 149 LVVSASLDQTVRVWD 163
Score = 40.7 bits (91), Expect = 6e-04
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW-----------------KLTRDENN-Y 174
L GHN +V + +PK D+++S+S D+T+ VW +LT+ ++ +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLF 189
Query: 175 G----IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--RFEDHTK 336
G I + L GH ++ +SG+ D+ ++LW + K H
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+V SV F IVS S DK+I +W+
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 159
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 154 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 333
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 334 KDVLSVAFSVDNRQ-IVSGSRDKTIXLWN 417
V S+ N +VSGSRD LW+
Sbjct: 171 GTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 153
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 34.7 bits (76), Expect = 0.038
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 211 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVS 384
F ++S DG Y LSGS D +W + + + H +V +V +S ++ +
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVAT 399
Query: 385 GSRDKTIXLWN 417
S D T+ LWN
Sbjct: 400 ASDDFTVRLWN 410
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 285
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 286 WDLAAGKTTRRFE 324
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
Score = 27.1 bits (57), Expect = 7.7
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +1
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVA--FSVDNR 372
SH I + S G Y + D + L++ L K + F D V S D
Sbjct: 292 SHGIVSLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGE 351
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
++SGS D +W I GH V+ V +SP+
Sbjct: 352 YVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPS 392
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 201
+++L + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 202 HSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQ 375
HS ++ + + + + +GS DKT++L+DL T F+ H ++V V ++ N
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 376 IVS 384
I++
Sbjct: 332 ILA 334
Score = 33.9 bits (74), Expect = 0.067
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 198
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 199 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 297
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
Score = 28.7 bits (61), Expect = 2.5
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-----PQKRLYGHSHFISD 222
H+G V + P+ P +I + + + + V+ ++ + + P +L GHS
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 223 VVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRR------FEDHTKDVLSVAFSVDNRQIV 381
+ S + LSGS D + LWD+ A + F+ H V VA+ + + +
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 382 -SGSRDKTIXLWNTLAECXYTIXDD--GHSDWVSCVRFSP 492
S D+ + +W+ + HS V+C+ F+P
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNP 283
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 360
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V ++A+
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 361 VDNRQIVS---GSRDKTIXLWNT 420
+++ G D I WNT
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNT 332
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
G L LW + HT VL +A S + + S + D+ + LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 42.7 bits (96), Expect = 1e-04
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
GH+ V +A +P PD ++S+S+D + L E I GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
L + A S S D T ++W+ G FE H V + AFS D ++++G +K +
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILR 122
Query: 409 LWN 417
+++
Sbjct: 123 IFD 125
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 196 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
+GHS + DV S DG + +S S D L + G FE H V S + +
Sbjct: 8 HGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKN 67
Query: 367 NRQIVSGSRDKTIXLWNTL 423
+ S S D T +WN L
Sbjct: 68 AIRAASASADFTAKIWNAL 86
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
GN ++G D + +D G+ + H V V ++ SGS D T+ +W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +1
Query: 112 LSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 291
+S D ++++ L + I +K + +S + DG A + WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 292 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
G + H +V++S D + S S D T+ LW
Sbjct: 337 YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVA 354
P L GH H + DV + +GS D LR+WD + H++ VL+VA
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 355 FS--VDNRQIVSGSRDKTIXLWN 417
S + +I+S RD T+ W+
Sbjct: 69 ASPWLGEDKIISQGRDGTVKCWD 91
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTL 423
D +RL+D+ K R F HT + + FS D + ++S S D ++ +W+ +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 306
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 32.7 bits (71), Expect = 0.15
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Frame = +1
Query: 73 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 252
T I Y + +L S++ L +W + + Y Q + +G S ++ V S +
Sbjct: 142 TSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLY---QFKGWGSS--VTSCVSSPALDVV 196
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD-VLSVAFSVDNRQIV-SGSRDKTIXLWNTLA 426
G D + + ++ + FE ++ V +++FS D R ++ SG I +WN
Sbjct: 197 AIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNK 256
Query: 427 ECXYTIXDDGHSDWVSCVRFSPN 495
+ ++ D H + + F N
Sbjct: 257 KRLQSVIRDAHDSSIISLNFLAN 279
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/106 (18%), Positives = 45/106 (42%)
Frame = +1
Query: 172 YGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 351
+ + +KR Y H + V S +S + L++WD + ++ D ++ +
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQW-DVGCSLVKI 521
Query: 352 AFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFS 489
+ N + + + D I L++ + GH+D ++ + FS
Sbjct: 522 VYHRVNGLLATVADDFVIRLYDVVT-LKMVREFRGHTDRITDLCFS 566
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT LW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 41.9 bits (94), Expect = 3e-04
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
+S D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH ++ + + +G+ S + D T +W G+ + H+ V S D+ ++
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 379 VSGSRDKTIXLWN 417
++GS D+T LW+
Sbjct: 95 ITGSADQTAKLWD 107
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 375
GH I+ + ++D ++ L+GS DKT +LWD+ + + V +VA S + N
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHV 276
Query: 376 IVSGSRD 396
++ G +D
Sbjct: 277 VLGGGQD 283
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXL 411
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 226 VLSSDGNYALS-GSWDKTLRLWD 291
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSV 351
P + GH + V + S N +GS D+T++LWDL+ + + + + +
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFI 420
Query: 352 AFSVDNRQIVS-GSRDKTIXLWNTLAE 429
AFS DN +++ G + LW+TL++
Sbjct: 421 AFSPDNPFLLAMGGVMGELKLWDTLSD 447
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Frame = +1
Query: 199 GHSHFISDVVLSSDG----NYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSV 363
GHS ++ + SSD + S S D T+R WD + + R + + +++ S ++
Sbjct: 81 GHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGG 140
Query: 364 DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
+++G + + LW+ ++ H D V+ V F PN LL
Sbjct: 141 AADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPNKLL 190
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 184 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF- 357
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 358 -SVDNRQIVSGSRDKTIXLWNT 420
+ +VSG+ D + L+NT
Sbjct: 103 PETSDELVVSGAGDAEVRLFNT 124
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 313 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 493 NHATPLL 513
+ L+
Sbjct: 104 ETSDELV 110
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = +1
Query: 178 IPQKRLY-GHSHFISDV----VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 342
I KR Y GH + +D+ L G Y SGS D +W+ G+ + +
Sbjct: 607 IDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVL 666
Query: 343 LSVAFSVDNRQIVSGSRDKTIXLWNTLA 426
+ + + + D TI +W+ A
Sbjct: 667 NCIQCHPFDSVVATSGIDNTIKIWSPTA 694
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 369
RL+GH I+ + L D SGSWD ++R+WD ++ K + H+ V +A
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETT 308
Query: 370 RQIVSGSRDKTIXLWNTLAECXYTIXDDGH 459
SGS + +W+ +E I D H
Sbjct: 309 LASTSGS---DVYIWDVSSETPLAIIPDAH 335
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
LYGH+ + V L + + +D +R+WD+ G + + + ++A D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALA--ADTK 215
Query: 373 QIVSGSRDKTIXLWNTL 423
+V+G D I W +L
Sbjct: 216 LLVAGGTDGFIHCWKSL 232
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIXL 411
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ +
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVM 335
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 405
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 406 XLWNTLAE 429
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 41.1 bits (92), Expect = 4e-04
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 372
++ VV+S DGN+ G W+K + D + H VL + V
Sbjct: 272 VNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGE 329
Query: 373 QIVSGSRDKTIXLWN---TLAECXYTIXDDGHSDWVSCVRFSPNH 498
+ SGS DK+I LW T C + + GH V C++ SPN+
Sbjct: 330 MVCSGSADKSIGLWRREVTGMLCKFGVI-HGHEGPVKCLQASPNN 373
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
KRL+ H S L+ SGSWDKTL++W L+ K + H D ++ + D
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGD 224
Query: 367 NRQIVSGSRDKTIXLW 414
R + S S D + +W
Sbjct: 225 GR-VYSASADGKVKIW 239
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 25 ETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 204
E +L RGHN V + +M+ S S DK++ +W+ R+ ++GH
Sbjct: 306 EEWRLGFETRGHNMAVLCMCV---VGEMVCSGSADKSIGLWR--REVTGMLCKFGVIHGH 360
Query: 205 SHFISDVVLSSD----GNYALSGSWDKTLRLW 288
+ + S + G SG DK+LR+W
Sbjct: 361 EGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 40.7 bits (91), Expect = 6e-04
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 225
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 396
S D SG D L +W+ + + + +HT V ++ +S +++ G+ D
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTAD 364
Query: 397 KTIXLWNT 420
+ I WNT
Sbjct: 365 RCIRFWNT 372
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 402
VL+ + SGS D+ + D+ + H +V + +S D+R++ SG D
Sbjct: 262 VLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQ 321
Query: 403 IXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPL 510
+ +WN ++ + H+ V + +SP+ ++ L
Sbjct: 322 LLVWNNHSQQPILKLTE-HTAAVKAITWSPHQSSLL 356
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ LW + H+ VL +A S D + IV+G+ D+T+ WN
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWN 456
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 40.7 bits (91), Expect = 6e-04
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K +
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILR 127
Query: 409 LWN 417
+++
Sbjct: 128 VFD 130
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
D N++G+ + Y I L GN ++G D +RL+D GK + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHG 271
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
V V F+ SGS D TI +W T
Sbjct: 272 PVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 0.82
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +1
Query: 196 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
+GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNN 72
Query: 367 NRQIVSGSRDKTIXLWNTL 423
+ S S D + LW+ L
Sbjct: 73 ALRAASASADFSAKLWDAL 91
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+RLWD+ +GK + E + V S S D R I + T+ W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 40.7 bits (91), Expect = 6e-04
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 23/177 (12%)
Frame = +1
Query: 46 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWKLTRD----------ENNYGIPQKR 192
TL GH G V Q+A +PK+ ++ S S D +I+WK ++ +
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 193 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 357
H +S +SDGN ++ G WD T G T+ + T+ V+
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSS 170
Query: 358 SVDN--RQIVSGSRDKTIXLW-----NTLAECXYTIXDDGHSDWVSCVRFSPNHATP 507
+ + ++ SG D T+ +W + +C + + H+DWV V ++PN P
Sbjct: 171 GMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCFPAL--NKHTDWVRDVAWAPNLGLP 225
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
PQK GHS I DVV+ G + S D T+++
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKI 37
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 40.7 bits (91), Expect = 6e-04
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Frame = +1
Query: 46 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK------LTRD----ENNYGIPQKR 192
TL GH G V ++A +PKY ++ S S D +I+WK T+D ++ +
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 193 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKD--VLSV 351
H +S SSDGN ++ G WD + G T+ + T ++S
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSS 170
Query: 352 AFSVDNRQIVSGSRDKTIXLWNTL-----AECXYTIXDDGHSDWVSCVRFSPNHATP 507
++ SG D T+ +W +C + H+DWV V ++PN P
Sbjct: 171 GLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPAL--QKHTDWVRDVAWAPNLGLP 225
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 360
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ F
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 361 -VDNRQIVSGSRDKTI 405
D+R IV+ + DK +
Sbjct: 109 FSDDRTIVTSAADKQV 124
Score = 34.7 bits (76), Expect = 0.038
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 313 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K +
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 409 LWN 417
+++
Sbjct: 128 VFD 130
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
V V F+ SGS D TI +W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.7 bits (66), Expect = 0.62
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 348
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 349 VAFSVDNRQIVSGSRDKTIXLWNTL 423
+ + S S D + LW+ L
Sbjct: 67 SCLDNNALRAASASADFSAKLWDAL 91
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+RLWD+ +GK + E + V S S D R I + T+ W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K +
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 409 LWN 417
+++
Sbjct: 128 VFD 130
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
V V F+ SGS D TI +W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.7 bits (66), Expect = 0.62
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 348
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 349 VAFSVDNRQIVSGSRDKTIXLWNTL 423
+ + S S D + LW+ L
Sbjct: 67 SCLDNNALRAASASADFSAKLWDAL 91
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+RLWD+ +GK + E + V S S D R I + T+ W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 381
HS +S + L+ D S SWD+T+++W + K + H V SV + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 382 SGSRDKTIXLW 414
+GS D T+ +W
Sbjct: 192 TGSADGTVKVW 202
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 360
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 323
Query: 361 VDNRQIVS---GSRDKTIXLWNTLAECXYTIXDDG 456
+++ G D+TI WNT D G
Sbjct: 324 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTG 358
Score = 37.5 bits (83), Expect = 0.005
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Frame = +1
Query: 13 SKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 186
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 70 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 128
Query: 187 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 351
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 129 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 188
Query: 352 AFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
++ D R + G + + LW++ + GH V + ++ NH
Sbjct: 189 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH 236
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
G L LW + HT VL +A S D + S + D+T+ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ HT++V + +S +Q+ SG D + +W+
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
+ L GH+ + + S DG S + D+TLR W++
Sbjct: 393 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 360
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 313
Query: 361 VDNRQIVS---GSRDKTIXLWNTLAECXYTIXDDG 456
+++ G D+TI WNT D G
Sbjct: 314 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTG 348
Score = 37.5 bits (83), Expect = 0.005
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Frame = +1
Query: 13 SKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 186
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 60 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 118
Query: 187 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 351
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 119 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 178
Query: 352 AFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
++ D R + G + + LW++ + GH V + ++ NH
Sbjct: 179 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH 226
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
G L LW + HT VL +A S D + S + D+T+ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ HT++V + +S +Q+ SG D + +W+
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
+ L GH+ + + S DG S + D+TLR W++
Sbjct: 383 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 198
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 199 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 339
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 35.9 bits (79), Expect = 0.017
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 339
P RL GH + SS Y LSGS D+ + LWD++A T + +E H
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI 220
Query: 340 VLSVAFSVDNRQIV-SGSRDKTIXLWN 417
+ VA+ + N I S D + +W+
Sbjct: 221 IEDVAWHMKNENIFGSAGDDCQLVIWD 247
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH + +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ-----MQHQVKVHEREINYLSFN 270
Query: 235 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 405
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 271 PFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRL 330
Query: 406 XLWN 417
+W+
Sbjct: 331 MVWD 334
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +1
Query: 103 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG-----HSHFISDVVLSSDGNYALSGSW 267
D++++SS D +L ++ + + I + +G +H S ++ SS N +G
Sbjct: 37 DLLVTSSEDDSLRLFDIA-NAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGES 95
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ L ++D + R F+ H V+S+ S N +SGS D+++ LW+
Sbjct: 96 LRYLSMYD---NRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNR 372
G + ++D+ S+DG L + + + + D G+ F E + F+ D +
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 373 QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHA 501
++SGS D T+ WN + + + VSC++++P A
Sbjct: 258 YVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 399
+ + DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAASTVL 308
Query: 400 TIXLWN 417
T + N
Sbjct: 309 TFWIPN 314
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 97 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 273
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 274 TLRLWDL 294
++RLWDL
Sbjct: 137 SVRLWDL 143
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Frame = +1
Query: 43 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 222
G GH V +A P S D L++W + +K H +
Sbjct: 275 GIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD- 333
Query: 223 VVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSVAFSVDNRQIV- 381
D N L+GS D T+R++D G +FE H VL V +S D +
Sbjct: 334 -WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFG 392
Query: 382 SGSRDKTIXLWN 417
S + D + +W+
Sbjct: 393 SSAEDGLLNIWD 404
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +1
Query: 58 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 216
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 217 S-DVVLSSDGNYALSGSWDKTLRLWDL 294
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 360
GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A+
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 361 VDNRQIVS---GSRDKTIXLWNT 420
+++ G D I WNT
Sbjct: 294 PFQASLLATGGGVGDGKINFWNT 316
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
G L LW + HT VL +A S D + S + D+T+ LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 318
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--------------RFED---- 327
H H ++ V LS D + S S D T+ WD+++GK+ +F++
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQESWYT 203
Query: 328 -HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
H K L++A S D R + +G D + LW+
Sbjct: 204 RHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 378
GH +S + SGS+D TL +W+ H ++LS+ ++ ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 379 VSGSRDKTIXLW 414
+S RD+T+ L+
Sbjct: 320 LSVGRDRTMQLY 331
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Frame = +1
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAF 357
+ +SSDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCF 271
Query: 358 SVDNRQIVSGSRDKTIXLWN 417
++ SGS D T+ +WN
Sbjct: 272 REGTAELFSGSYDGTLSIWN 291
Score = 31.5 bits (68), Expect = 0.36
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH-SHFISDVVL 231
GH G V+ + ++ S S D TL +W + Y + +GH S +S L
Sbjct: 261 GHCGIVSSLCFREGTAELF-SGSYDGTLSIWNA--EHRTY---IESCFGHQSELLSIDAL 314
Query: 232 SSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
+ LS D+T++L+ + ++TR ++ V++ + +SGS + +I
Sbjct: 315 GRER--VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSI 372
Query: 406 XLWNTLAECXYTIXDDGH 459
LW+ L + I ++ H
Sbjct: 373 ALWSILKKKPVFIVNNAH 390
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIXLWNTL---AECXYTIXD 450
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 451 DGHSDWVSCVRFSPN 495
HS V FSP+
Sbjct: 392 VNHSRAVHSAYFSPS 406
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIX 408
SSDG S D T+++ D GK + H + V F + +IV SGS D +
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 409 LWNT-LAECXYT 441
LWN EC T
Sbjct: 172 LWNAKTGECIRT 183
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 256 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIX 408
SSDG S D T+++ D GK + H + V F + +IV SGS D +
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 409 LWNT-LAECXYT 441
LWN EC T
Sbjct: 172 LWNAKTGECIRT 183
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 256 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 229 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSV 351
L S G A +G ++++WDL GK E H K V S+
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTSL 270
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.9 bits (84), Expect = 0.004
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 198
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 199 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 342
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 339
P RL GH + S Y LSGS D+ + LWD++A + +E H
Sbjct: 160 PDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESA 219
Query: 340 VLSVAFSVDNRQIV-SGSRDKTIXLWNT 420
+ V++ + N + S D + +W+T
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDT 247
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/124 (17%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH + ++ + K ++ S+ D L++W ++ Q ++ H ++ + +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ-----MQHQVKVHEREVNYLSFN 269
Query: 235 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 405
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 406 XLWN 417
+W+
Sbjct: 330 MVWD 333
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--S 360
+L GH ++ V +S G+ +SGS D+ + LW+ +G + H ++V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 361 VDNRQIVSGSRDKTIXLWNTL 423
D+R I++ D + L L
Sbjct: 110 TDDRTIITSGADGQVRLGQIL 130
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 316 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
+ H V +V F+ +VSGS D+ I LWN L+ GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNR 372
HS+F++ + S DG ++ S DK ++D G ED H + +V++S D++
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 373 QIVSGSRDKTIXLW 414
++++ S DK+ +W
Sbjct: 110 RVLTVSADKSAKVW 123
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 213
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 309
I V S D L+ S DK+ ++W++A T
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGT 130
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
F+ H++ VLS AF +I + D + ++ ++ + HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHRE-HSNFVNCIRYSPD 62
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +1
Query: 139 IVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 318
+VW++ +N YG + GH + + S AL S+D + L + G
Sbjct: 251 MVWRIPLTDNGYGAAEHVDIGHQPLDISIAVDSPEATALV-SFDSGVVLLN---GLNILS 306
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE--CXYTIXDDGHSDWVSCVRFSP 492
D V + S D ++ + G +D + +++ + + H ++ +R+SP
Sbjct: 307 KIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSP 366
Query: 493 N 495
+
Sbjct: 367 D 367
Score = 21.8 bits (44), Expect(2) = 6.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
L GH VT +A + ILS S D ++ W
Sbjct: 184 LSGHIKNVTSLAVLGENQKTILSCSYDGLIVKW 216
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIXLWN 417
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++ LW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 222
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
Score = 28.7 bits (61), Expect = 2.5
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +1
Query: 79 IATNPKYPDMILSSSRDKTLIVWKLTRDE--NNYGIPQKRLYGHSHFISDVVLSSDGNYA 252
I N + SS+ + + VW + R++ +KR++ + +D L +
Sbjct: 539 ICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA----- 593
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIXLWNTLAE 429
SGS D +++LW + G + + ++ V F S R + GS D + ++
Sbjct: 594 -SGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNP 651
Query: 430 CXYTIXDDGHSDWVSCVRF 486
GH VS VRF
Sbjct: 652 KLPLCTMIGHHKTVSYVRF 670
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIXLWN 417
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++ LW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 222
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
Score = 28.7 bits (61), Expect = 2.5
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +1
Query: 79 IATNPKYPDMILSSSRDKTLIVWKLTRDE--NNYGIPQKRLYGHSHFISDVVLSSDGNYA 252
I N + SS+ + + VW + R++ +KR++ + +D L +
Sbjct: 539 ICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLA----- 593
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIXLWNTLAE 429
SGS D +++LW + G + + ++ V F S R + GS D + ++
Sbjct: 594 -SGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNP 651
Query: 430 CXYTIXDDGHSDWVSCVRF 486
GH VS VRF
Sbjct: 652 KLPLCTMIGHHKTVSYVRF 670
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 418 T 420
T
Sbjct: 937 T 937
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIXLW 414
DKT+++WD A G FE H V S+ + + + I S + D I W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 418 T 420
T
Sbjct: 937 T 937
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIXLW 414
DKT+++WD A G FE H V S+ + + + I S + D I W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 418 T 420
T
Sbjct: 948 T 948
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIXLW 414
DKT+++WD A G FE H V SV + + + I S + D I W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 418 T 420
T
Sbjct: 948 T 948
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIXLW 414
DKT+++WD A G FE H V SV + + + I S + D I W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 28 TLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 207
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 208 HFISDVVLSSDGNYALSGSWDKTLRLWD 291
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIX 408
S+DG S D T+++ D G + H + V F + +IV SGS D +
Sbjct: 115 STDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVR 174
Query: 409 LWN-TLAEC 432
LWN T +EC
Sbjct: 175 LWNTTTSEC 183
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 187 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 360
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 361 -VDNRQIVSGSRD 396
D+R IV+ + D
Sbjct: 113 FSDDRTIVTCAAD 125
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 313 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSP 492
++ E H V +V+F+ + ++SGS D+ + LW+ GH++ V +F P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 36.7 bits (81), Expect = 0.009
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Frame = +1
Query: 43 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 222
G GH+ V A P P I++ D +V + + + HS+F++
Sbjct: 138 GEFDGHSRRVLSCAIKPTRPFRIVTCGED--FLVNFYEGPPFKFKLSSRE---HSNFVNC 192
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF------EDHTKDVLSVAFSVDNRQIVS 384
V + DG+ ++ S DK ++D GKT + H + +V++S D +Q+++
Sbjct: 193 VRFAPDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLT 249
Query: 385 GSRDKTIXLWN 417
S DK+ +W+
Sbjct: 250 VSADKSAKIWD 260
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 214 ISDVVLSSDGNYALS---GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIV 381
I D+ S+DG ++ G +R + +G F+ H++ VLS A +IV
Sbjct: 102 IDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIV 161
Query: 382 SGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
+ D + + + + HS++V+CVRF+P+
Sbjct: 162 TCGEDFLVNFYEG-PPFKFKLSSREHSNFVNCVRFAPD 198
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 199 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 375
GH +S + VL + +Y LSGS+D + W L G + T++ F+ +
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKL--QRTQNSQIKCFAAHEEE 379
Query: 376 IVSGSRDKTI 405
IV+ D I
Sbjct: 380 IVTSGYDNKI 389
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 297
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 357
GH+ + + S G SG D + +WD +A+ TR RFE+HT V ++A+
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 358 SVDNRQIVS---GSRDKTIXLWNT 420
+++ G D I WNT
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNT 299
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
G L LW + HT VL +A S D + S + D+T+ LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 178 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 318
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKT-----LRLWDLAAGKTTRRFEDHTKDVLSVA 354
+LYGH + + + GN S ++ + LW++ K R + H+ V +
Sbjct: 595 KLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLE 654
Query: 355 FSVDNRQIVSGSRDK 399
FS D+ ++S SRD+
Sbjct: 655 FSYDDTLLLSVSRDR 669
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-------AAGKTTRRFEDHTKDVLS 348
RL HS ++ + S D LS S D+ ++ + + K + E H + + +
Sbjct: 642 RLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWA 701
Query: 349 VAFSVDNRQIVSGSRDKTIXLWN 417
+++ Q + SRDKT+ +W+
Sbjct: 702 CSWNPFGHQFATSSRDKTVKIWS 724
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 49 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 153
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Frame = +1
Query: 13 SKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL-----TRDEN 168
SK SE ++ GH VT + T + + +LS S+D+T V WK DE+
Sbjct: 399 SKESENWQMQKVPSGHFAAVTDV-TWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 169 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 291
+ + + +++GH +V + +SG+ +K +R+++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFE 498
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Frame = +1
Query: 154 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-- 327
+++ N+ + QK GH ++DV + G Y LS S D+T R++ ED
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 328 ---------HTKDVLSVAF--SVDNRQIVSGSRDKTIXLW 414
H D+ VA N + VSG+ +K + ++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF 497
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 34 KLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 162
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.9 bits (79), Expect = 0.017
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 235 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
S+ + +GS D T++ W L G H K V+S V N + SGS D T+ LW
Sbjct: 595 SEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLW 652
Query: 415 N 417
+
Sbjct: 653 S 653
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 289 DLA 297
L+
Sbjct: 653 SLS 655
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 339
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
SG D ++R+W++ T ++ +H V + S ++SGS DKTI +W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.029
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 270
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 271 KTLRLWDLAAG 303
T+RLWD+ +G
Sbjct: 229 STVRLWDITSG 239
Score = 31.1 bits (67), Expect = 0.47
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Frame = +1
Query: 127 DKTLIVWKLTRDENNYG--IPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
DK +VW + D N G +P K+ L + I+ + S DG Y LS D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182
Query: 289 -----DLAAGKTTRRF-EDHTKDVLSVAF----SVDNRQIVSGSRDKTIXLWN 417
L + F H++ + AF + ++SGS D T+ LW+
Sbjct: 183 VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 34.7 bits (76), Expect = 0.038
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 151 LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 330
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 331 TKDVLSVAF-SVDNRQIVSGSRDKT 402
K V S+ S D + SGS D T
Sbjct: 626 KKRVWSIDISSADPTLLASGSDDGT 650
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 216
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 217 SDVVLSSDGNYALSGS 264
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.038
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 312
R H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +1
Query: 58 HNGWVTQI-ATNPKYPDMILSSSRDKTLIVWKLTRDENNY-GIPQKRLYGHSHFISDVVL 231
H G VT + ATN +LS+ D + +W + N R+ + D
Sbjct: 311 HYGAVTGLKATNDGM--YLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLD--- 365
Query: 232 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXL 411
+SD + KT++ + + +G+TT H + V + F+ +++++ + D+ I +
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 412 WN 417
W+
Sbjct: 426 WS 427
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQ 375
H +++ +V + + + +S S DKTLR+WDL T + F + H V FS+ +
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKD 509
Query: 376 IVSGSRD 396
++S SR+
Sbjct: 510 VISISRN 516
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 159
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 34.3 bits (75), Expect = 0.050
Identities = 32/105 (30%), Positives = 47/105 (44%)
Frame = +1
Query: 103 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 282
D +L SS DK++ ++ D N G + + H + D D + S D +R
Sbjct: 29 DHLLVSSWDKSVRLY----DAN--GDLMRGEFKHGGAVLDCCFHDDSS-GFSVCADTKVR 81
Query: 283 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D AGK H K V V +S Q+++GS DKTI W+
Sbjct: 82 RIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 369
IS++ S++ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 148 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 318
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
P L GH+ +S V G +G+ D L+LW + G+ R +E H + V S
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
Query: 361 V 363
V
Sbjct: 164 V 164
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
+I S S +++W N + +L H +S +G + + ++ +++
Sbjct: 211 VIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHM-----AAVSPNGRFLAAAAFTADVKV 265
Query: 286 WDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
W++ K + + H V + FS ++ QI++ S+D +I +WN
Sbjct: 266 WEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.5 bits (73), Expect = 0.088
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 276
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 277 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAEC 432
+ +WDL++ R+ D + ++ + +IV+ + + +W+ +C
Sbjct: 3404 VIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSINGDC 3454
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 147
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 175 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 291
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 0.82
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 285
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 286 WDL 294
WDL
Sbjct: 1260 WDL 1262
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 301 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
G ++H V +A S D+ VS S D T+ +W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.15
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 199 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 306
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 319 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
++ HT V S++ I SGS D ++ +W E + + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWE--VETGRCLKVWQFDEAIMCVAWNPLS 476
Query: 499 ATPLL 513
P+L
Sbjct: 477 RLPVL 481
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 46 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 153
+L GH V +I T P P +++++S+D+++ +W +
Sbjct: 123 SLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Score = 31.5 bits (68), Expect = 0.36
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Frame = +1
Query: 88 NPKYPDMILSSSRDKTLIVWKLTRDENN-----------YGIPQKRLYGHSHFISDVVLS 234
N + D ILS S D +++W+ EN+ Y +P ++ F D+ LS
Sbjct: 246 NRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIW-FIKFSCDLHLS 304
Query: 235 SDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVL-SVAFSVDNRQIVSGSRDKT 402
S G+ + + +WDL + T+ + +K V+ A SVD I++ D T
Sbjct: 305 S----VAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 403 IXLWNTLAE 429
I W+ + +
Sbjct: 361 IWRWDVITK 369
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIXLW 414
DKT+++WD G FE H V SV +N Q I S + D I W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIXLW 414
DKT+++WD G FE H V SV +N Q I S + D I W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 186
L RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 186
L RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 181 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAF 357
P L GH I+ + +S+D + +SGS D T L G+ R + + +S +A
Sbjct: 1103 PSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAA 1162
Query: 358 SVDNRQIVSGSRDKTIXLWN 417
S R ++ G D ++ L++
Sbjct: 1163 SHHGRIVLYGDDDLSLHLYS 1182
Score = 30.7 bits (66), Expect = 0.62
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 318
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 259 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAE 429
G L LW + HT VL +A S + + S + D+ + LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 31.5 bits (68), Expect = 0.36
Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Frame = +1
Query: 49 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 228
L+GH G VT + +P +++ S T++ W+L ++ + K + + F + +V
Sbjct: 142 LKGHKGPVTGLDFHPN-GELLASIDTTGTVLCWELQNGVVSFTL--KGVAPDTGFNTSIV 198
Query: 229 ----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSR 393
S DG + ++D G+ DH + + + ++ + + I +
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 394 DKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
DK + LW+ + I + + C+ + PN
Sbjct: 259 DKQVLLWD--VDKKQDIDRHKFEERICCMSWKPN 290
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 238 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLW 414
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 312
R H ++ + ++DG Y LS +RLWD+ +G+ T
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
Score = 30.3 bits (65), Expect = 0.82
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +1
Query: 271 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 88 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 258
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 259 GSWDKTLRLWDLAAG 303
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +1
Query: 106 MILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHS---HFISDVVLSSDGN-YALSGSWD 270
++ S+ DK + +W+ ++ + G +P G +S + S G+ Y SG
Sbjct: 57 VVASTGEDKKISLWR--KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTG 114
Query: 271 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+ +++WDL ++ + HT + V ++ + + S S
Sbjct: 115 QIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 375
H I+ V S+ + + S+DK ++LWDL + + TK + V FS D+R
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 376 IVSGSRDKTI 405
+++ + D +
Sbjct: 642 LLASAVDNEV 651
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 253 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 366
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 367 NRQIVSGSRDKTIXLW 414
+ IV+ D T +W
Sbjct: 288 DSLIVTAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 190 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 366
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 367 NRQIVSGSRDKTIXLW 414
+ IV+ D T +W
Sbjct: 288 DSLIVTAGEDCTCRVW 303
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 342
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDNRQIVSG 387
I V + G+ +G D +WD + D+ + + SV++S +++
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 388 SRDKTIXLWN 417
+ DK++ LW+
Sbjct: 86 AADKSLTLWD 95
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 318
I+ V S G+ L + DK+L LWD++ G+ R
Sbjct: 70 ITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIAR 104
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 366
IS++ S++ ++ L SWDK +RL+D++ F H VL F D
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDD 69
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 291
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 328 HTKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
H K V V +S Q+++GS DKT+ W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDL 294
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDL 294
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 30.7 bits (66), Expect = 0.62
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 8/167 (4%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 210
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 211 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 381
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 382 SGSRD---KTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S D T+ LW+ GH V + + P+ ++ LL
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLL 280
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 30.7 bits (66), Expect = 0.62
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 8/167 (4%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 210
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 211 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 381
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 382 SGSRD---KTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNHATPLL 513
S D T+ LW+ GH V + + P+ ++ LL
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLL 280
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 160 DENNYGIPQKRLYGHSHFISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
D N+ + + + S ++++ S DG A+ G + L L D +GK E H
Sbjct: 264 DATNFALLNRFAFHWS--VNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLD 320
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWN 417
S A+ + + + +G++D T LW+
Sbjct: 321 YSFSSAWHPNGQILATGNQDTTCRLWD 347
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDN 369
L GH + +G +G+ D T RLWD+ ++ + + + + ++ F+ D
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 370 RQIVSGSRDKTIXLWNTLA 426
R + + L++T A
Sbjct: 375 RFLAMAEPADFVHLFDTEA 393
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 223 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 360
+ +S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Frame = +1
Query: 7 PFSKMSETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 186
P S S + L H G V + N K P+ + S + D T+ +W L N P
Sbjct: 97 PISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPSKPS 152
Query: 187 KRLYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDL 294
L G ++ + S N S S + T +WD+
Sbjct: 153 HYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +1
Query: 109 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 288
+++SS D TL ++ + G+ + +SH + + + LSG D R+W
Sbjct: 358 LMASSMDGTLYDQRMVK--RGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIW 415
Query: 289 DLAAGK--TTRRFEDHTKDVLSVAFSVDNRQ 375
+ +G+ + +F + V V +S D RQ
Sbjct: 416 SIKSGQLMSENKFSNSVPSV--VCWSADERQ 444
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 268 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 29.5 bits (63), Expect = 1.4
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Frame = +1
Query: 100 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 264
PD++ +SS L +W+++ DE+ + + S + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSS 155
Query: 265 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNTLAECXYTI 444
D T +WD+ + H K+V +A+ S S D ++ +++ + TI
Sbjct: 156 IDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG-GVGVFASVSEDGSVRVFDLRDKEHSTI 214
Query: 445 XDDGHSDWVSCVRFSPNHATP 507
+ VR S N P
Sbjct: 215 IYESGEPSTPLVRLSWNKQDP 235
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 241 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIXLWNT 420
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Frame = +1
Query: 220 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFS-VDNRQIVSGS 390
D L + SGS D T+++WD G T + SV F I G
Sbjct: 173 DYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGC 232
Query: 391 RDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPNH 498
D+ +++ I DGH+ V+ RF +H
Sbjct: 233 ADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSH 268
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 199 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 291
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 328 HTKDVLSVAFSV---DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSD 465
H V VAFS+ R ++SG DKT+ +W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 199 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 291
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 328 HTKDVLSVAFSV---DNRQIVSGSRDKTIXLWNTLAECXYTIXDDGHSD 465
H V VAFS+ R ++SG DKT+ +W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 22 SETLKLXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 186
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 187 KRLY 198
+Y
Sbjct: 3370 TVVY 3373
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQIVS 384
+S DG ++G+ D + +W D G R E HT V+ + S I S
Sbjct: 3282 VSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIAS 3341
Query: 385 GSRDKTIXLWN 417
S D T+ +W+
Sbjct: 3342 SSDDCTVIIWD 3352
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 202 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 306
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 244 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIX 408
N +GS D WD+ R F++ HT V ++ + D I +GS D+T+
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 409 LWNT 420
+W+T
Sbjct: 237 VWDT 240
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 52 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 231
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 232 SSDGNYAL-SGSWDKTLRLWD 291
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
LS DG D L D + G+T + H + A+ + +G++DKT
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFS 489
+W+T G+ V +RF+
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFT 371
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 369
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 370 RQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
R + + +++T + D + +S + FSP+
Sbjct: 375 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPD 415
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIX 408
LS DG D L D + G+T + H + A+ + +G++DKT
Sbjct: 279 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Query: 409 LWNTLAECXYTIXDDGHSDWVSCVRFS 489
+W+T G+ V +RF+
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFT 365
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 369
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 370 RQIVSGSRDKTIXLWNTLAECXYTIXDDGHSDWVSCVRFSPN 495
R + + +++T + D + +S + FSP+
Sbjct: 369 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPD 409
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 205 SHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ 375
S +SDV ++SD + + S + +WD AG + D + S+ VDN+
Sbjct: 150 SRGLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQT 209
Query: 376 IVSGSRDKTIXLWN 417
I ++ I +W+
Sbjct: 210 IFGAGKEGIIHIWD 223
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS 73
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 214 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 390
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS 73
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +1
Query: 205 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAFSVDN--- 369
SH ++ G A SG D T+ L+DL + + D H + +++F +
Sbjct: 39 SHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLS 98
Query: 370 --RQIVSGSRDKTIXLWNT 420
R ++S + D ++ +++T
Sbjct: 99 FPRNLISAAADGSVAIFDT 117
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 124 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 210
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 340 VLSVAFSVDNRQIVSGSRDKTIXLWN-TLAECXYTIXDDG 456
V S+AFS D + ++S D + +W+ +C Y D+G
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEG 416
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 169 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 294
N G + L GH F DG +G+ DKT R+WD+
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 169 NYGIPQKRLYGHSHF---ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 336
++ + + +L H F ++ LS DG A+ G + L + D GKT H
Sbjct: 262 DFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGL-IVDPNTGKTLETLSGHLD 320
Query: 337 DVLSVAFSVDNRQIVSGSRDKTIXLWN 417
+ A+ D +G++DKT +W+
Sbjct: 321 FSFASAWHPDGVTFSTGNQDKTCRVWD 347
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 37 LXGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 201
L RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 27.9 bits (59), Expect = 4.4
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
GH V + +P ++ S S D ++ VW + ++ P H+ ++ + +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS----PALSFKAHNADVNVISWN 322
Query: 235 SDGNYAL-SGSWDKTLRLWDLAAGK----TTRRFEDHTKDVLSVAFSVDNRQIVS-GSRD 396
+ L SGS D T + DL K FE H + S+ +S ++ S D
Sbjct: 323 RLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGD 382
Query: 397 KTIXLWNTLAE 429
+ +W+ E
Sbjct: 383 NQLTIWDLSLE 393
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 169 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 345
N G L GH F DG +G+ DKT R+WD+ K+ + +
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIR 364
Query: 346 SVAFSVDNR 372
S+ ++ D +
Sbjct: 365 SIRYTSDGK 373
>At5g60920.1 68418.m07642 phytochelatin synthetase, putative / COBRA
cell expansion protein COB, putative similar to
phytochelatin synthetase GI:29570314; similar to
GB:AAK56072; identified in Roudier, et al, Plant Phys.
(2002) 130:538-548 (PMID:12376623); identical to cDNA
putative phytochelatin synthetase GI:3559804; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 456
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 472 TPNRCVHHLGWYTXTPQGCSRV**SCRENQTLSDGC 365
TP CV +Y T GC C+ N+T S C
Sbjct: 230 TPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGAC 265
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 76 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 249
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+G+ D TLR+++ + KT V S+ FS + +VS
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVS 201
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.5 bits (58), Expect = 5.8
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 76 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 249
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 250 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 384
+G+ D TLR+++ + KT V S+ FS + +VS
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVS 201
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 55 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 234
G G ++ +A +P M+ S +T +++ E Y L+G ++ V S
Sbjct: 210 GQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV-----LHGQEGGVTHVQFS 264
Query: 235 SDGNYALSGS-WDKTLRLWDL 294
DGNY +G D + WD+
Sbjct: 265 KDGNYLYTGGRKDPYILCWDI 285
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 186
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +1
Query: 226 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 405
V + + ++G+ D + +WDL+ G D +S + D+R I S D +
Sbjct: 1129 VAGTISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRNICIASEDGQL 1188
Query: 406 XLW 414
++
Sbjct: 1189 LVY 1191
>At4g04570.1 68417.m00670 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 654
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/53 (18%), Positives = 26/53 (49%)
Frame = -1
Query: 365 STEKATESTSLVWSSNRLVVLPAARSHKRKVLSQEPERA*LPSLDSTTSEMKC 207
ST++ T S+ ++W + +++P ++ + + E + D +E+ C
Sbjct: 601 STKRPTMSSVIIWLGSETIIIPLPKAPAFTWIRSQSESGAMSLSDDVFTELSC 653
>At2g18810.1 68415.m02189 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 234
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 229 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 354
++S NY L W+K + L G R + H+ D+L A
Sbjct: 139 MTSTSNYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFA 180
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 331 TKDVLSVAFSVDNRQIVSGSRDKTIXLWN 417
T LSV +S D ++I SGS D I W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,568,644
Number of Sequences: 28952
Number of extensions: 230796
Number of successful extensions: 1639
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -