Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H01f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 126 2e-28
UniRef50_UPI0000E4A947 Cluster: PREDICTED: similar to KIAA1450 p... 100 2e-20
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 70 3e-11
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 59 7e-08
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 58 1e-07
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 58 1e-07
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 57 3e-07
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 55 1e-06
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 54 3e-06
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 51 1e-05
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 50 3e-05
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 49 6e-05
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 49 7e-05
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 47 3e-04
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 45 0.001
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 42 0.009
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 39 0.060
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 36 0.43
UniRef50_Q4SHS9 Cluster: Chromosome 5 SCAF14581, whole genome sh... 36 0.43
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 36 0.43
UniRef50_Q9LIA4 Cluster: Protein RIK; n=4; Arabidopsis thaliana|... 34 1.7
UniRef50_Q4P2G5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 33 3.0
UniRef50_Q09831 Cluster: Serine/threonine-protein kinase ppk14; ... 33 3.0
UniRef50_Q4SDC9 Cluster: Chromosome 1 SCAF14640, whole genome sh... 33 4.0
UniRef50_A7F3R4 Cluster: Predicted protein; n=2; Sclerotiniaceae... 33 5.2
UniRef50_Q9L6S1 Cluster: ATP-dependent DNA helicase rep; n=46; G... 32 6.9
UniRef50_A0KE51 Cluster: Periplasmic sensor signal transduction ... 32 9.2
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 126 bits (305), Expect = 2e-28
Identities = 65/82 (79%), Positives = 70/82 (85%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIK 117
S EALA ISEYSEAG+TVRGTYV GK PP+GERKLYLAIES ELAV KAK EITRLIK
Sbjct: 1144 SKEALAQISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITRLIK 1203
Query: 116 EELLKLQTSAHHMVNKARYKVL 51
EELLKL +SAHH+ NK RYKV+
Sbjct: 1204 EELLKL-SSAHHVFNKGRYKVV 1224
>UniRef50_UPI0000E4A947 Cluster: PREDICTED: similar to KIAA1450
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to KIAA1450 protein,
partial - Strongylocentrotus purpuratus
Length = 1258
Score = 100 bits (240), Expect = 2e-20
Identities = 50/80 (62%), Positives = 62/80 (77%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIK 117
S E LA I +YSEAGIT+RGTY PGK P EGERKLYLAIES + AV+KAK+EITRL+K
Sbjct: 115 SKENLAQIQDYSEAGITIRGTYFAPGKEPKEGERKLYLAIESVSDRAVSKAKAEITRLVK 174
Query: 116 EELLKLQTSAHHMVNKARYK 57
+EL++LQ S + NK ++
Sbjct: 175 DELVRLQNS-YQPTNKGSWQ 193
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIK 117
S E++ ++E +E GI+VRG +V PGK P GER+L+L +E+ E + AK EI R++K
Sbjct: 890 SRESVGHVAELAEVGISVRGVHVPPGKEPKNGERRLHLLLEARSERNLKAAKEEIIRIMK 949
Query: 116 EELLKLQTSAHHMVNKARYKV 54
E +L +ARYKV
Sbjct: 950 EAFRQLTAQLQRGGTQARYKV 970
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 58.8 bits (136), Expect = 7e-08
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
+ L ISE++ A IT RG Y GK P GERKLYL IE E +V +AK+E+ R++++
Sbjct: 892 DTLIPISEWTGAAITTRGQYYTTGKVPGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDF 951
Query: 110 LLKLQTSAHHMVNKARYKVL 51
++ S V +Y V+
Sbjct: 952 TIQ-AISNPSAVQPGKYSVV 970
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/74 (40%), Positives = 38/74 (51%)
Frame = -1
Query: 302 LRSMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRL 123
L S E L + E IT RG+Y+ GK P G+ KLYL IE E + KAK EI +
Sbjct: 641 LTSKEKLISVMENCNVNITTRGSYIGEGKTPLPGQSKLYLLIEGKNEEDITKAKKEIKNI 700
Query: 122 IKEELLKLQTSAHH 81
+ E LK + H
Sbjct: 701 LDEITLKYKDKVLH 714
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
E L ISE+S A IT RG + + G+ P ERKLYL +E E++V AK+E+ R++ E+
Sbjct: 911 ETLGPISEWSGASITTRGKFYEAGRIPGPEERKLYLFVEGPTEISVKTAKAELKRVL-ED 969
Query: 110 LLKLQTSAHHMVNKARYKVL 51
+ S RY VL
Sbjct: 970 ITNQTFSLPGGAQSGRYSVL 989
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 56.8 bits (131), Expect = 3e-07
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
E L ISE++ A IT RG + G+ P GERKLYL IE E +V AK+E+ R++ E+
Sbjct: 1088 ETLGPISEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVL-ED 1146
Query: 110 LLKLQTSAHHMVNKARYKVL 51
+ S+ RY VL
Sbjct: 1147 ITNQAMSSLPGGASGRYSVL 1166
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
+AL I+ + IT +GT+ P K P GERKLYL IE + +V AKS+I +++ E
Sbjct: 1079 DALLEITNFPNTTITTKGTFFPPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDEV 1138
Query: 110 LLKLQTSAHHMV 75
Q++ + V
Sbjct: 1139 QSTHQSTGKYSV 1150
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreococcus
tauri|Rep: DEAD-box protein abstrakt - Ostreococcus tauri
Length = 1030
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
E +A I E + A +T +G Y QPG+ G+RKLYL IE E V + K+ + ++I++
Sbjct: 953 ETIAQIMEMTGAAVTAKGQYAQPGRPLAPGDRKLYLLIEGPSERVVKEGKNYVKQIIEQA 1012
Query: 110 LLK 102
+ K
Sbjct: 1013 IAK 1015
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = -1
Query: 275 ISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQ 96
++E + IT +G + PGK P GE KLYL IE EL V +A +E+ RL+ E +
Sbjct: 940 VTELTGTSITTKGNFYLPGKNPEPGEEKLYLWIEGPSELVVNRAITELRRLLLEGINHSL 999
Query: 95 TSAHHMVNKARYKVL 51
+ RY V+
Sbjct: 1000 EGGNKPSASGRYTVV 1014
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIK 117
S E L +I E + I+ RG+ V+PGK P G++KL+L IE E V A EI R+ +
Sbjct: 1077 SKEFLNMIHELTNCQISQRGSLVEPGKKPLPGQKKLFLRIEGENEYFVMSAYKEIKRMAQ 1136
Query: 116 E 114
+
Sbjct: 1137 D 1137
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 49.2 bits (112), Expect = 6e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEE 111
+ L I E++ A +T +G Y PG+ G+RKLYL IE E V + K+ + +I+
Sbjct: 645 DTLVQIMEHTGAAVTAKGQYAAPGRPLAPGDRKLYLLIEGPTERVVKEGKNYVKNIIETA 704
Query: 110 LLKLQTSAHHMVNKARYKV 54
+ K + RY++
Sbjct: 705 IAKQALPGAAGQPQGRYRI 723
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 48.8 bits (111), Expect = 7e-05
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -1
Query: 290 EALALISEYSEAGITVRGTYVQPGKAPP-EGERKLYLAIESSQELAVAKAKSEITRLIKE 114
E + L+ E S A IT+RG + PG+ P GE KL L IES+ E+ V A EI R++ E
Sbjct: 992 EQMTLLQEVSGASITMRGRFYPPGEEPALGGEPKLSLLIESNDEMRVRAAVEEIRRVLVE 1051
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 284 LALISEYSEAGITVRGTYVQPGKAPPEG-ERKLYLAIESSQELAVAKAKSEITRLIKEEL 108
+A I E + IT +G + GK P G E KLY+ IE E+ V+ A +E+TRL++E
Sbjct: 1149 VAKILEATGTSITTKGNFYPAGKEVPAGAEPKLYILIEGDTEVVVSSALTELTRLLREGT 1208
Query: 107 LKLQTSAHHMVNKARYKV 54
+ + RY +
Sbjct: 1209 IAAVDADSRAPASGRYTI 1226
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = -1
Query: 284 LALISEYSEAGITVRGTYVQPGKAPPEGER-KLYLAIESSQELAVAKAKSEITRLIKEEL 108
+A I + + IT +G + PGK P E + KLY+ +E E V +A E+TRL+ +
Sbjct: 1070 VAKILDATGVSITTKGNFYGPGKEPGETDLPKLYILVEGDTEGVVTQAMLELTRLLTDAT 1129
Query: 107 LKLQTSAHHMVNKARYKVL 51
+ + +A RY V+
Sbjct: 1130 VAAEEAASTRGPTGRYSVM 1148
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 41.9 bits (94), Expect = 0.009
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 251 ITVRGTYVQPGKAP-PEGERKLYLAIESSQELAVAKAKSEITRLIKEELLK 102
IT +G Y PG+ P P+ E KL++ IE + E AV A E++ L+ L+K
Sbjct: 918 ITAKGEYYPPGRIPGPKDEPKLFILIEGTSERAVKLAHHELSELLVSGLVK 968
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 39.1 bits (87), Expect = 0.060
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -1
Query: 284 LALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKE 114
+A I E + IT +G++ GK + + KLY+ +E E+ V A E+ RL+KE
Sbjct: 1075 VAKILEATGTSITTKGSFYPAGKEV-QADPKLYILVEGDTEVVVTNAMRELMRLLKE 1130
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 36.3 bits (80), Expect = 0.43
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 266 YSEAGITV--RGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKL 99
Y + G V +G YV+ GK G +KLYL IE E V A +I ++E+ +K+
Sbjct: 1286 YLQTGCLVVQKGIYVEIGKKVQPGFQKLYLRIEGDSEYQVRMAYRDIKAELEEKSIKI 1343
>UniRef50_Q4SHS9 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 351
Score = 36.3 bits (80), Expect = 0.43
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -1
Query: 266 YSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSA 87
+S A +T +G ++ + G+R LYL ++ + V KA I +I E+LL+ ++
Sbjct: 95 FSGAVVTTKGHFMTETEKEDAGQRPLYLHVQGKNQEQVNKAVMRIKEIISEDLLRASAAS 154
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 36.3 bits (80), Expect = 0.43
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRL 123
S + L + + + I +G + PG P GER+LYL IE + + AV A + I +
Sbjct: 566 SADNLNSVMDETGTMIIQKGVFCPPGVKPLAGERRLYLRIEGTTKFAVQAALNRIEEM 623
>UniRef50_Q9LIA4 Cluster: Protein RIK; n=4; Arabidopsis
thaliana|Rep: Protein RIK - Arabidopsis thaliana
(Mouse-ear cress)
Length = 578
Score = 34.3 bits (75), Expect = 1.7
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 275 ISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEI 132
I + A + RG Y +P APP+GE+ LYL I ++ +L + + I
Sbjct: 114 IQRSTGAVVITRGKY-RPPNAPPDGEKPLYLHISAAAQLQLKETTERI 160
>UniRef50_Q4P2G5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 750
Score = 33.9 bits (74), Expect = 2.3
Identities = 25/76 (32%), Positives = 33/76 (43%)
Frame = -1
Query: 299 RSMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLI 120
+S + L L EY G R +PGK PE + K Y A E L I R +
Sbjct: 445 QSEDYLYLCMEYCMGGEFFRALQTRPGKCLPEEDAKFY-AAEVIAALEYLHLMGFIYRDL 503
Query: 119 KEELLKLQTSAHHMVN 72
K E + L S H M++
Sbjct: 504 KPENILLHQSGHVMLS 519
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 33.5 bits (73), Expect = 3.0
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -1
Query: 302 LRSMEALALISEYSEAGITVRGTYVQP----GKAPPEGERKLYLAIESSQELAVAKAKSE 135
L+S + I+E +E + +G Y P + EGE+ LYL I AV A+S+
Sbjct: 603 LQSGTFMRSIAEETETSLIRKGVYFDPRYKHSRRMKEGEKPLYLLIVGRSMEAVRAARSK 662
Query: 134 ITRLIKEELLKLQ 96
+ +K ELL Q
Sbjct: 663 LDE-VKAELLSKQ 674
>UniRef50_Q09831 Cluster: Serine/threonine-protein kinase ppk14;
n=16; Ascomycota|Rep: Serine/threonine-protein kinase
ppk14 - Schizosaccharomyces pombe (Fission yeast)
Length = 566
Score = 33.5 bits (73), Expect = 3.0
Identities = 25/76 (32%), Positives = 34/76 (44%)
Frame = -1
Query: 299 RSMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLI 120
+S E L L EY G R +PG+ E E K Y+A E + L I R +
Sbjct: 263 QSDEYLYLCMEYCMGGEFFRALQRRPGRCLSENEAKFYIA-EVTAALEYLHLMGFIYRDL 321
Query: 119 KEELLKLQTSAHHMVN 72
K E + L S H M++
Sbjct: 322 KPENILLHESGHIMLS 337
>UniRef50_Q4SDC9 Cluster: Chromosome 1 SCAF14640, whole genome
shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 1
SCAF14640, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1709
Score = 33.1 bits (72), Expect = 4.0
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 227 QPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQ 96
QP + PPEGE L E +E V +AK+ RL L+LQ
Sbjct: 510 QPLEQPPEGENSLSAPEEKPEEPPVLRAKANWLRLFSRVRLQLQ 553
>UniRef50_A7F3R4 Cluster: Predicted protein; n=2;
Sclerotiniaceae|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 1097
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 100 SLRSSSLMSRVISDLALATASSCELSMARYSLRSPSGGALPGWTYVPRTVIPASEYS 270
++ SS+++S I A+ ++S+ E S A + +G ++PG T VP IP EY+
Sbjct: 509 AITSSAILSSAILSSAILSSSAAESSSA-----TTTGSSIPGPTQVPIIDIPIGEYA 560
>UniRef50_Q9L6S1 Cluster: ATP-dependent DNA helicase rep; n=46;
Gammaproteobacteria|Rep: ATP-dependent DNA helicase rep
- Salmonella typhimurium
Length = 674
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -1
Query: 296 SMEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIK 117
+++ + L Y +G ++ + P E++L+ + EL V A +E +
Sbjct: 267 ALQVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEH---E 323
Query: 116 EELLKLQTSAHHMVNKARYK 57
E + + AHH VNK +YK
Sbjct: 324 AERVTGELIAHHFVNKTQYK 343
>UniRef50_A0KE51 Cluster: Periplasmic sensor signal transduction
histidine kinase precursor; n=7; Burkholderia cepacia
complex|Rep: Periplasmic sensor signal transduction
histidine kinase precursor - Burkholderia cenocepacia
(strain HI2424)
Length = 509
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 58 LYLALLTM*WAEVWSLRSSSLMSRVISDLALATASSCELSMARYSLRSPSGGALP 222
L AL A VW + +SS S+ ++ A AS+CE +RY S S GA P
Sbjct: 29 LVAALCATLVAVVW-VTASSAESQQVASAKAAGASACEAVASRYGASSASAGAGP 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,361,665
Number of Sequences: 1657284
Number of extensions: 7770201
Number of successful extensions: 24099
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 23467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24093
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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