Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308H01f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 30 0.017
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 1.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 24 1.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 1.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 1.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 1.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.7
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 29.9 bits (64), Expect = 0.017
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 109 SSSLMSRVISDLALATASSCELSMARYSLRSPSGGALPGWTYVPRTVIP 255
S++LMS+ + ++ S +S ++RSP+GG LP P IP
Sbjct: 373 STALMSQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPPIP 421
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 195 QAVPRHRELAGAGRCQSQIRDNAAHQGRAPQTPDLGPSH 79
+ +PR R + I NA ++ R PQ P GP+H
Sbjct: 142 EQIPRFRYIGPPTPFPRFIPPNA-YRFRPPQNPRFGPTH 179
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 195 QAVPRHRELAGAGRCQSQIRDNAAHQGRAPQTPDLGPSH 79
+ +PR R + I NA ++ R PQ P GP+H
Sbjct: 142 EQIPRFRYIGPPTPFPRFIPPNA-YRFRPPQNPRFGPTH 179
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 195 QAVPRHRELAGAGRCQSQIRDNAAHQGRAPQTPDLGPSH 79
+ +PR R + I NA ++ R PQ P GP+H
Sbjct: 380 EQIPRFRYIGPPTPFPRFIPPNA-YRFRPPQNPRFGPTH 417
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 458 NNKYNVDCKQYYSTNKYL 511
NN YN +CK+ Y Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 458 NNKYNVDCKQYYSTNKYL 511
NN YN +CK+ Y Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 458 NNKYNVDCKQYYSTNKYL 511
NN YN +CK+ Y Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 458 NNKYNVDCKQYYSTNKYL 511
NN YN +CK+ Y Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 455 INNKYNVDCKQYYSTNKY 508
I+N Y DC YST +
Sbjct: 183 ISNNYTTDCTIEYSTGNF 200
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 452 LINNKYNVDCKQYYSTNKY 508
L+ N Y DC Q YST +
Sbjct: 214 LVKN-YTADCTQVYSTGNF 231
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 208 GGALPGWTYVPRTVIPASEYSLIR 279
GGA G T V R V+P+ L+R
Sbjct: 140 GGASRGCTAVLRCVVPSFVKDLVR 163
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 208 GGALPGWTYVPRTVIPASEYSLIR 279
GGA G T V R V+P+ L+R
Sbjct: 140 GGASRGCTAVLRCVVPSFVKDLVR 163
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 437 HEGQSLINNKYNVDCKQYYSTN 502
H + NN YN K YY+ N
Sbjct: 91 HNNNNYNNNNYNNYKKLYYNIN 112
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 458 NNKYNVDCKQYY 493
NN YN +CK+ Y
Sbjct: 344 NNNYNNNCKKLY 355
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 458 NNKYNVDCKQYYSTNKY 508
N KYN + K Y+ N Y
Sbjct: 95 NYKYNYNNKYNYNNNNY 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,001
Number of Sequences: 438
Number of extensions: 2414
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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