Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 467 DRVRDLFLELLIL 429
           DRV+DLFLE ++L
Sbjct: 580 DRVKDLFLEAVLL 592



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 331 RQRSTETRMTSKRRPSRPR 387
           R+RST ++ T     +RPR
Sbjct: 43  RKRSTSSQSTEGENDARPR 61


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 144 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 260
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 152 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 69
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 339 KYRNEDDKQKETIQAKNALESY 404
           ++ N D  Q+ + +  NA ESY
Sbjct: 365 QFNNSDFVQRNSTEFDNATESY 386


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = +3

Query: 171 PRGVPQIEVTFDIDANGILNVSAIEKSTNKENKI 272
           P+G  +  +  +I ANG+L+  +I+++   ++ +
Sbjct: 839 PKGDNRYTIREEILANGVLSGLSIKRTERSDSAL 872


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,946
Number of Sequences: 336
Number of extensions: 2197
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)