Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308G10f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 220 1e-58
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 219 2e-58
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 174 6e-45
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 139 3e-34
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 124 1e-29
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.034
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.079
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.10
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.42
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 0.73
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 0.97
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 1.7
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 1.7
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.7
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 27 2.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 2.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.2
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 3.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 3.9
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 3.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.9
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 3.9
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 3.9
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.2
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 5.2
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 5.2
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 25 5.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 5.2
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 6.8
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 6.8
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 6.8
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 25 9.0
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 25 9.0
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 9.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 220 bits (537), Expect = 1e-58
Identities = 109/171 (63%), Positives = 130/171 (76%)
Frame = +3
Query: 6 LIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVP 185
LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVP
Sbjct: 411 LIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVP 470
Query: 186 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 365
QIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ +
Sbjct: 471 QIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAE 530
Query: 366 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSV*QADHPSTSATTPSKWL 518
IQAKN LESY +S++++++D LK+K+ S +A + T +WL
Sbjct: 531 TSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETI--EWL 579
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 219 bits (535), Expect = 2e-58
Identities = 106/153 (69%), Positives = 122/153 (79%)
Frame = +3
Query: 6 LIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVP 185
LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVP
Sbjct: 411 LIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVP 470
Query: 186 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 365
QIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ +
Sbjct: 471 QIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAE 530
Query: 366 KETIQAKNALESYCFSMKSTMEDEKLKEKISDS 464
IQAKN LESY +S++++++D LK+K+ S
Sbjct: 531 SGRIQAKNHLESYAYSLRNSLDDPNLKDKVDAS 563
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 174 bits (424), Expect = 6e-45
Identities = 86/139 (61%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 245
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++
Sbjct: 460 DNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVD 519
Query: 246 KS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 422
KS K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K
Sbjct: 520 KSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKG 579
Query: 423 TM-EDEKLKEKISDSV*QA 476
+DE+L K+ QA
Sbjct: 580 QFDDDEQLGGKVDPEDKQA 598
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 139 bits (336), Expect = 3e-34
Identities = 70/147 (47%), Positives = 95/147 (64%)
Frame = +3
Query: 6 LIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVP 185
LI RN +D Q V I+VF+GER + +DN L+G F+LTGI PAP+G P
Sbjct: 454 LINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQP 513
Query: 186 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 365
QIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +
Sbjct: 514 QIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMAR 572
Query: 366 KETIQAKNALESYCFSMKSTMEDEKLK 446
KE I+ N ES C ++S ++ K K
Sbjct: 573 KEAIENGNRAESVCTDIESNLDIHKDK 599
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 124 bits (298), Expect = 1e-29
Identities = 55/131 (41%), Positives = 88/131 (67%)
Frame = +3
Query: 63 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 242
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 243 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 422
EK+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++
Sbjct: 495 EKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIET 554
Query: 423 TMEDEKLKEKI 455
T+ + + K+
Sbjct: 555 TISEPNVMMKL 565
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.034
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 246 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 422
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 423 TMED 434
++D
Sbjct: 593 KLDD 596
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.079
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 210 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 383
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 384 KNA 392
+A
Sbjct: 118 LDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.10
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 255 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 434
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 435 EKLKEKISD 461
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.42
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 288 KGRLSKEEIERMVNEAEKYRNEDD 359
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 0.73
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 300 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 449
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKE 1654
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +3
Query: 243 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 422
++ TNK ++T N + ++EIE + + + + E I K E +KS
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI-TKEQFE----QLKS 1491
Query: 423 TMEDEKLKEKISDSV*QADHPSTSA 497
E E+ +++++DS + +H + A
Sbjct: 1492 --EKERTEKELADSKNELEHLQSEA 1514
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 0.97
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 225 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 356
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 218 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 322
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +3
Query: 216 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE---KYRNEDDKQKETIQAK 386
N I++ A + +NKI + + EE++ ++N+ K N + Q T
Sbjct: 107 NEIVDWKANNSNEKAQNKIATNKESTDILPEEVQLVLNDLNDDVKSANSANLQPITTNVV 166
Query: 387 NALESYCFSMKSTMEDEKLKE 449
N ++Y + E +K+
Sbjct: 167 NEKDAYRKDIDELPEPSNMKD 187
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 306 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSV*QADH 482
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + + H
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 483 PSTS 494
+S
Sbjct: 550 KRSS 553
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 235 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 98
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 321 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 425
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 216 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 392
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 393 LESYCFSMKSTMED 434
++ S ED
Sbjct: 214 VDMIFASFIRRAED 227
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 231 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 392
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 261 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 431
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 19 TLPSPLNRLRHSPPTLITNPEYSSKYLR 102
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 3.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +3
Query: 180 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 341
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 342 YRN-------EDDKQKETIQAKNALESYCFSMKSTMEDE 437
YRN DDKQ + KN+LE+ M+ + E
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIE 1308
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 300 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 422
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 3.9
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 216 NGILNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 392
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 393 LESYCFSMKSTMEDEKLKEKISDS 464
S+ ++ +T++ + KI +S
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNS 457
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 243 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 422
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 423 TMEDEKLKEKISDS 464
DE L ++ DS
Sbjct: 88 QDADETLHQEAQDS 101
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 282 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 458
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 288 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 398
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 249 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 410
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 303 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSV*QADH 482
+EE E+ + E K R + DK++E + + LE + + + K+ + + Q
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPN--QTKE 751
Query: 483 PSTSATTPSK 512
S TT S+
Sbjct: 752 GSDGCTTSSQ 761
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 180 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 341
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 246 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 374
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 5.2
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 234 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 413
S +EK +K+ K++ +++ +S E +E + NE + D+Q + KNA + S
Sbjct: 124 SMLEK-VSKKPKVSEAHNE-EISPENVETIENELDLPVKGKDEQTTGLVYKNANDLLTGS 181
Query: 414 MKSTMEDEKL----KEKI--SDSV*QADHPSTSATTPS 509
+ S + D+ K+K+ DS +D S A TP+
Sbjct: 182 LLSFIVDDSFSYEQKKKLLCVDSFPTSDVRSLVAGTPA 219
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 216 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 356
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 250 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARS 104
+ S L IP+AS K S T G G S + P L++ + R+
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERN 527
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 164 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 42
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 6.8
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Frame = +3
Query: 204 DIDANGILNVSAIEKSTNKENKIT----ITNDKGRLSKEEIER-----MVNEAE-KYRNE 353
D+D VS IEK+T + +T N G+L K EIE ++N+ E
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQVSLSIEEE 1268
Query: 354 DDKQKETIQAKNA 392
K KE+ NA
Sbjct: 1269 KPKNKESEVDNNA 1281
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 280 VMVILFSLLVDFSIAETLRIPLASM 206
V+ F L + F+ TLR+P+AS+
Sbjct: 77 VVTYCFVLFLQFAEQSTLRVPMASL 101
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 24.6 bits (51), Expect = 9.0
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 201 FDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 338
FD D NG + V E+ T+ +T+ RLS+EE+ M+ EA+
Sbjct: 94 FDKDGNGYITV---EELTH-----VLTSLGERLSQEEVADMIREAD 131
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 411 SMKSTMEDEKLKEKISD 461
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,986,424
Number of Sequences: 5004
Number of extensions: 37250
Number of successful extensions: 218
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -