Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G09f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB71C Cluster: hypothetical protein TTHERM_0049...    32   6.9  
UniRef50_A7LLV0 Cluster: Dynein heavy chain 14; n=2; Tetrahymena...    32   6.9  
UniRef50_A7S149 Cluster: Predicted protein; n=1; Nematostella ve...    32   9.2  

>UniRef50_UPI00006CB71C Cluster: hypothetical protein
           TTHERM_00494760; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00494760 - Tetrahymena
           thermophila SB210
          Length = 341

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 24/97 (24%), Positives = 44/97 (45%)
 Frame = -2

Query: 520 ISINSFPL*RXQTNCASERPCLNRDALCQSLRRNQTLSVYCAFKTLLRLDEALGVISNFE 341
           +SINSFPL    TN  ++ P + + ++C +     +  +    K L +L       SNF+
Sbjct: 155 LSINSFPLTNEITNTITQIPTIQKISVCLNEVDQLSYFIKNIQKNLQKLQ--FNFTSNFQ 212

Query: 340 SVRCCS*TKYYFEKNDLQLNSRACKASLVAMFFGDEK 230
                +     F++  L++ +  CK    A F  D++
Sbjct: 213 KQLLQNNNTSNFQR--LEIQAEVCKLFFAASFLEDQQ 247


>UniRef50_A7LLV0 Cluster: Dynein heavy chain 14; n=2; Tetrahymena
           thermophila|Rep: Dynein heavy chain 14 - Tetrahymena
           thermophila
          Length = 1261

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +3

Query: 165 NIDSI*ERNHIKKREKKTSLPNFSSPKNIATREALHAREFNWRSFFSK*YFV*EQHRTDS 344
           ++D I E    +  E  TS+ N +SPKN+    A H  + N  S F +  F  +Q R   
Sbjct: 328 SLDQIDEEKEEQADEVNTSIANANSPKNVLNTSASHQSQ-NRNSQFHRQSFT-QQGRNSI 385

Query: 345 KLEITPSASSSLNKVLKAQYT--DSVWLRRKDWQSASRLR 458
            LE   S   SL   L+ Q T   S +++ KD     ++R
Sbjct: 386 ILERKDSRRHSL---LQTQVTIPSSPFIQMKDKLEHQKVR 422


>UniRef50_A7S149 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 415

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
 Frame = +3

Query: 261 EALHAREFNWRSFFSK*YFV*EQHRTDSKLEITPSASSSLNKVLKAQYTDSVWL------ 422
           E +H   F           V ++ RT +KL    SASSS NKVL + + D +WL      
Sbjct: 304 EFMHGNGFIHNDIKGANVLVDDKGRT-AKLTDFGSASSSENKVLNSSFEDDIWLVGCFIL 362

Query: 423 --RRKDWQSASRLRQGRSLAQFVXNLYRG 503
                +    + L+ GR    F  N+ +G
Sbjct: 363 EMMNAERPCCAMLKSGRQQRDFTENIPQG 391


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,443,443
Number of Sequences: 1657284
Number of extensions: 7306612
Number of successful extensions: 16949
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16946
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)