Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 351 EITPSASSSLNKVLKAQYTDSVWLRRKDWQ 440
           E  P+A   L +  + +Y  ++ LR   WQ
Sbjct: 373 ESPPAADELLRRFHEIRYMSTIDLRSSYWQ 402


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 448 DALCQSLRRNQTLS 407
           DALCQS R+  + S
Sbjct: 33  DALCQSFRKQNSSS 46


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 357 TPSASSSLNKVLKAQYTDSVWLR 425
           +PS+ S   K L  ++  ++W++
Sbjct: 297 SPSSDSQYQKQLNVEHAANLWVK 319


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 481 NCASERPCLNRDALCQ 434
           N     PC + DA+CQ
Sbjct: 418 NECDSNPCKHLDAICQ 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,721
Number of Sequences: 336
Number of extensions: 2003
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)