Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035581-1|AAH35581.1|  801|Homo sapiens PR domain containing 4 ...    29   7.5  
AL133083-1|CAB61401.1|  725|Homo sapiens hypothetical protein pr...    29   7.5  

>BC035581-1|AAH35581.1|  801|Homo sapiens PR domain containing 4
           protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +3

Query: 231 FSSPKNIATREALHAREFNWRSFFSK*YFV*EQHRTDSKLEITPSASSSLNKVLKAQYTD 410
           FS P N+ T   +H  + N+R       F  + H  +S + I         K LK  Y D
Sbjct: 627 FSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH-LESHMVIHTG-----EKNLKCDYCD 680

Query: 411 SVWLRRKD 434
            +++RR+D
Sbjct: 681 KLFMRRQD 688


>AL133083-1|CAB61401.1|  725|Homo sapiens hypothetical protein
           protein.
          Length = 725

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +3

Query: 231 FSSPKNIATREALHAREFNWRSFFSK*YFV*EQHRTDSKLEITPSASSSLNKVLKAQYTD 410
           FS P N+ T   +H  + N+R       F  + H  +S + I         K LK  Y D
Sbjct: 551 FSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH-LESHMVIHTG-----EKNLKCDYCD 604

Query: 411 SVWLRRKD 434
            +++RR+D
Sbjct: 605 KLFMRRQD 612


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,785,434
Number of Sequences: 237096
Number of extensions: 1080911
Number of successful extensions: 1897
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)