Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    40   0.035
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    40   0.046
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    35   1.3  
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    35   1.3  
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    35   1.3  
UniRef50_Q5XGR9 Cluster: LOC495157 protein; n=9; Tetrapoda|Rep: ...    34   1.7  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    34   1.7  
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;...    32   6.9  
UniRef50_Q4UHX0 Cluster: Transcriptional adaptor (ADA2 homologue...    32   6.9  
UniRef50_Q237Q0 Cluster: Putative uncharacterized protein; n=3; ...    32   6.9  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 39.9 bits (89), Expect = 0.035
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 406 PRGGARYPIRPIVSRIT 456
           PRGGARYPIRPIVSRIT
Sbjct: 259 PRGGARYPIRPIVSRIT 275


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 39.5 bits (88), Expect = 0.046
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 460 HWPSFYNVVTGKTLAXTQL 516
           HWPSFYNVVTGKTLA   L
Sbjct: 5   HWPSFYNVVTGKTLALPNL 23


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 462 LAVVLQRRDWENPG 503
           LAVVLQRRDWENPG
Sbjct: 68  LAVVLQRRDWENPG 81


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 462 LAVVLQRRDWENPG 503
           LAVVLQRRDWENPG
Sbjct: 22  LAVVLQRRDWENPG 35


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 462 LAVVLQRRDWENPG 503
           LAVVLQRRDWENPG
Sbjct: 26  LAVVLQRRDWENPG 39


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 462 LAVVLQRRDWENPG 503
           LAVVLQRRDWENPG
Sbjct: 8   LAVVLQRRDWENPG 21


>UniRef50_Q5XGR9 Cluster: LOC495157 protein; n=9; Tetrapoda|Rep:
           LOC495157 protein - Xenopus laevis (African clawed frog)
          Length = 247

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = -3

Query: 516 KLGXRQGFPSHDVVKRRPVNCNTTHYRANWVPGPPSRTNAINLMCKKL-CIEVTNTKQAS 340
           KLG  +    H++++RR ++ N +  R+N  P  P   N ++   KKL  ++  N +++ 
Sbjct: 51  KLGASKDTQPHNILQRRLLDTNLSKLRSNRSPWTPK--NDVSAQSKKLNQVKSVNPRKSE 108

Query: 339 VLN-IYIYCVCVTTQVHIL 286
             + IY+ C C   +V  L
Sbjct: 109 EDDMIYVCCQCAGMEVRAL 127


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -2

Query: 451 YDSL*GELGTGPPLE-DKRNKFNV*KTLY*SNQHKTSISFKYI 326
           YDSL GELGTGPPLE D  +K ++   +  +  +KT    +Y+
Sbjct: 278 YDSLYGELGTGPPLEVDGIDKLDIEFPIESARLYKTGDLARYL 320


>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 195

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 462 LAVVLQRRDWENP 500
           LAVVLQRRDWENP
Sbjct: 179 LAVVLQRRDWENP 191


>UniRef50_Q4UHX0 Cluster: Transcriptional adaptor (ADA2 homologue),
           putative; n=4; Piroplasmida|Rep: Transcriptional adaptor
           (ADA2 homologue), putative - Theileria annulata
          Length = 1146

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -3

Query: 387 MCKKLCIEVTNTKQASVL--NIYIYCVCVTTQVHILKLCPRKF**CRNTIQIKSLTFYFN 214
           +C KLC    + K A  +  NI + C C   +    ++    F      +  K    + N
Sbjct: 87  ICTKLCSRNGHIKCAECIDFNICLKCFCSGLERPDDEVLASSF----VNVSSKVTEEHHN 142

Query: 213 VHDL*YIAPSEFALYANGLFEFIRT*YQCYLLNNFIQ*GQQYFLLYTD 70
            H    + PS FAL++ G++  I+  Y    LNN +    +  LL  D
Sbjct: 143 THKYIPVGPSNFALFSKGIYLLIKIDY--ITLNNVLDWSAEQELLLVD 188


>UniRef50_Q237Q0 Cluster: Putative uncharacterized protein; n=3;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1549

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 224 NVNDLIWIVFLHYQNFRGHNFKMCTCVVTHTQYMYIFKTDACFVLVTSIQSFLHIK 391
           ++ND  +   ++  N+ G+ F M  C+   TQ++++       VL TS Q  +H K
Sbjct: 575 DINDKKYPQIVYTINY-GNQFSMALCLTQTTQHLFVSTNGGMLVLPTSSQVQIHTK 629


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,283,942
Number of Sequences: 1657284
Number of extensions: 9801104
Number of successful extensions: 18769
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18768
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)