Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308G05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0183 - 2652173-2653924 34 0.080
11_03_0197 - 11499012-11499318,11499353-11499489 32 0.32
12_02_0810 - 23359541-23360018,23360108-23360237,23360366-233604... 31 0.74
03_02_0016 + 4981845-4982165 31 0.74
07_03_0698 - 20765305-20768526 30 1.3
06_01_0932 + 7197418-7198893 30 1.3
04_04_0312 + 24314940-24315143,24316074-24316253,24316801-243170... 30 1.3
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 30 1.3
12_01_1010 - 10280424-10282003,10283359-10283668,10283749-102839... 29 1.7
07_03_1398 - 26271034-26271131,26271314-26271425,26271750-262717... 29 2.3
04_04_0197 + 23499527-23500603 29 2.3
12_02_0604 + 20920609-20922144 28 4.0
07_01_0455 - 3458432-3458574,3458768-3460619 28 4.0
01_06_1226 - 35518981-35519295,35519876-35520745 28 4.0
12_01_0044 + 349798-350173,350745-350905,351527-351662,352110-35... 28 5.2
03_02_0647 + 10154668-10156041 28 5.2
05_07_0302 - 29091666-29092331 27 6.9
05_03_0357 - 12916142-12916368,12916540-12916594 27 6.9
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 27 6.9
03_02_0811 + 11437654-11438958 27 6.9
07_03_0263 - 15951011-15951818,15952009-15952526,15952949-159531... 27 9.1
01_06_0884 + 32715963-32716284,32716837-32717567 27 9.1
>09_01_0183 - 2652173-2653924
Length = 583
Score = 33.9 bits (74), Expect = 0.080
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 6 AVRLHYGLPVIVKLLQPPSRWPLVKAV-VGLVRNLALCSANYAPLREHGAVHHLVRLLMR 182
AV + G+P+++ +P S P+V+A+ V ++N+A + L E G + LV LL
Sbjct: 282 AVAAYGGVPILINACRPGSGSPVVQALAVAALKNVASIEDVRSALVEEGGLPILVDLLAS 341
Query: 183 AYXDTQR 203
D Q+
Sbjct: 342 GTIDAQK 348
>11_03_0197 - 11499012-11499318,11499353-11499489
Length = 147
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 35 DSEAATASFSLASSEGRRGLGTQPGALLRQLRSVA--GTWRRSSS 163
++EA T+ SLA R +GT+PGA + + A G W+R S
Sbjct: 2 ENEATTSLSSLAGEPVRALVGTRPGAAISSTEAAAALGRWKRRQS 46
>12_02_0810 -
23359541-23360018,23360108-23360237,23360366-23360496,
23360541-23360635,23362461-23362593,23363830-23364029
Length = 388
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 192 RXRHASAGAPDDERRHVP----ATERSWRSRAPGCVPSPRRPSLEASEKEAVAASLSPAI 25
R H S DD+R+ + AT R RSR G PR+ +E+S +A + A
Sbjct: 28 RELHTSRRGADDDRQILKLVHAATARGRRSRGRGSTSPPRKGGMESSVPMIMADKKASAF 87
Query: 24 H 22
H
Sbjct: 88 H 88
>03_02_0016 + 4981845-4982165
Length = 106
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 147 GAVHHLVRLLMRAYXDTQRQRSSSGGGANTAYADGVRMEEIVEGAVGALHILAQRKP 317
GAVH R +M+A +++R+R + GGGA + ++ +V LH+L +P
Sbjct: 22 GAVH---RRVMKAKAESRRRRRAGGGGAVVSVGGAHPVQLLVARLPHLLHLLQVSEP 75
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 12 RLHYGLPVIVKLLQPPSRWPLVKAVV----GLVRNLALCSANYAPLREHGAVHHLVRLLM 179
+LH GL + + PP W + A++ L+ +L +CS +HHL ++ +
Sbjct: 886 KLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIRSRLPPRIKELHHLAKITL 945
Query: 180 R 182
R
Sbjct: 946 R 946
>06_01_0932 + 7197418-7198893
Length = 491
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 27 LPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYXDTQRQ 206
+PV+V LL S L G V +L++ N P+ GAV L+RLL A D R
Sbjct: 224 VPVLVGLLAAASP-ELRDHAAGAVYSLSIEERNRIPIGVLGAVPPLLRLLASA-ADGDRA 281
Query: 207 RSSSGGGANTAYADGVRMEEIVE--GAVGAL 293
R +G D + + GAV AL
Sbjct: 282 RRDAGMALYYLSLDEMNRSRLARSAGAVAAL 312
>04_04_0312 +
24314940-24315143,24316074-24316253,24316801-24317030,
24317205-24317375,24317685-24317790,24318099-24318305,
24318646-24318806,24319001-24319103
Length = 453
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 337 VGSVVCCGFLWAKICKAPTAPSTISSIRTPSA*AVLAPP 221
+G V+ FLWA +P AP+ S I P A L PP
Sbjct: 28 LGLVLVADFLWAS--SSPAAPAWSSRIDLPGRPAALVPP 64
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 180 ASAGAPDDERRHVPATERSWRSRAPGCVPSPRRPSLEASEKEAVAASLSPAI 25
A+AGAP E H P R ++ P P P + A+E V A ++ +
Sbjct: 21 AAAGAPSGEHHHRPRQHRRSSAQPPPLPPPPVVAAAAAAEAAPVMAPVAAPV 72
>12_01_1010 -
10280424-10282003,10283359-10283668,10283749-10283939,
10283967-10284279
Length = 797
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 96 VRNLALCSANYAPLREHGAVHHLVRLLMRAYXDTQ 200
+ NL C N + E+G + L+RLL+ DTQ
Sbjct: 243 LENLESCEKNVRQMAENGRLQPLLRLLLEGSSDTQ 277
>07_03_1398 -
26271034-26271131,26271314-26271425,26271750-26271793,
26272158-26272485,26272569-26272982
Length = 331
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 SANYAPLREHGAVHHLVRLLMRAYXDTQRQRSSSGGGANTAYADGVRMEEI-VEGAV 284
SA + P+R H H + ++AY ++ + SSG TA A V +E +E A+
Sbjct: 117 SAAFLPVRRHARAHFGPPVDVKAYDASRVRIGSSGKETTTATAAAVEVEVTRIENAI 173
>04_04_0197 + 23499527-23500603
Length = 358
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 367 VARIWE*HSAVGSVVCCGFLW 305
+ RIW+ SA G +CC F+W
Sbjct: 95 LVRIWQGRSAPGISICCLFVW 115
>12_02_0604 + 20920609-20922144
Length = 511
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 213 SSGGGANTAYADGVRMEEIVEGAVGALHILAQRKPQ 320
S G NTA AD + MEE V+ V L +L +K +
Sbjct: 222 SLGELKNTAQADQIEMEEKVKAKVEELKVLGAKKAE 257
>07_01_0455 - 3458432-3458574,3458768-3460619
Length = 664
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +3
Query: 36 IVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAVHHLVRLLMRAYXDTQRQRSS 215
++ L PPS P V+ V LA+ L A+ HL+ +L R D R R
Sbjct: 34 LLAALLPPS--PTVRQVQQAHARLAVLG-----LAASRAMPHLLAVLPRLLPDKPRHRGD 86
Query: 216 SGGGANTAYA 245
GGG YA
Sbjct: 87 DGGGDGDHYA 96
>01_06_1226 - 35518981-35519295,35519876-35520745
Length = 394
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 23 WIAGDSEAATASFSLASSEGRRGLGTQPGALLRQLRSVAGTW 148
W A EAA AS+ + +G + GALL + ++A W
Sbjct: 251 WEASGKEAAPASWVMDDGGEWTAVGARDGALLVTIGNIAQVW 292
>12_01_0044 +
349798-350173,350745-350905,351527-351662,352110-352206,
352344-352444,352658-352821,353461-353582,353667-353718
Length = 402
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 ALWIAGDSEA-ATASFSLASSEGRRGLG-TQPG-ALLRQLRSVAGTWRRSSSGAP 172
AL +AG A A +S L + + GLG G L LR++AG WR S G P
Sbjct: 339 ALALAGQLFAGAISSAVLLVAAPKFGLGGVWAGLTLFMSLRAIAGFWRLGSKGGP 393
>03_02_0647 + 10154668-10156041
Length = 457
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 26 IAGDSEAATASFSLASSEGRRGLGTQPGALLRQLRSVAG 142
+ G S AA A+ G RG+ + A LR L VAG
Sbjct: 84 VPGGSAAAAAAMGGLGERGARGVVRRVAAALRYLHDVAG 122
>05_07_0302 - 29091666-29092331
Length = 221
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -3
Query: 165 PDDERRHVPATERSWRSRAPGCVP---SPRRPSLE 70
P DER H + SWR+++ G P +P+RP+L+
Sbjct: 167 PRDERFHRFSWSWSWRNKSKGRGPLARAPQRPNLQ 201
>05_03_0357 - 12916142-12916368,12916540-12916594
Length = 93
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 174 AGAPDDERRHVPATERSWRSRAPGCVPSPRRPSLE 70
+G D+RR W S+ PSPR P LE
Sbjct: 15 SGRHRDDRRLRGNPRSPWDSKGSATAPSPRSPGLE 49
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 177 SAGAPDDERRHVPATERSWRSRAPGCVPSPRRPSLEAS 64
+A A R+ P T RS + R P P RP+ AS
Sbjct: 87 AAAAAGGHRKPRPTTSRSHKKRHPPAGSHPHRPNATAS 124
>03_02_0811 + 11437654-11438958
Length = 434
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +2
Query: 17 ALWIAGDSEAATASFSLASSEGRRGLGTQPGALLRQLRSVAGTWRRSSSGAPA 175
AL I+ + AAT L ++ RGL + LRS A RR SS A A
Sbjct: 14 ALAISRCNAAATVRMQLTHADAGRGLAARELMQRMALRSKARAARRLSSSASA 66
>07_03_0263 -
15951011-15951818,15952009-15952526,15952949-15953197,
15953270-15953857
Length = 720
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 56 SFSLASSEGRRGLGTQPGALLRQLRSVAGTWRRSSSGAPADACLXRHPET 205
+F +SS G G GA L S G W+ SSS A A +H T
Sbjct: 94 NFGNSSSAGAGRGGGNGGAFPGGLSSGRGVWQHSSSAATALGRRSQHSNT 143
>01_06_0884 + 32715963-32716284,32716837-32717567
Length = 350
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 156 ERRHVPATERSWRSRAPGCVPSPRRPSL 73
+R H A RSWR P PR P+L
Sbjct: 27 DRVHFAAVCRSWRESLEQLAPLPRSPAL 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,904,761
Number of Sequences: 37544
Number of extensions: 314673
Number of successful extensions: 1403
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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