Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308G05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein. 45 4e-05
U88170-7|AAO26016.1| 403|Caenorhabditis elegans Pantothenate ki... 32 0.29
U88170-6|AAM15553.1| 392|Caenorhabditis elegans Pantothenate ki... 32 0.29
U88170-5|AAB42246.2| 449|Caenorhabditis elegans Pantothenate ki... 32 0.29
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 32 0.29
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 32 0.29
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 31 0.50
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81508-2|CAB04143.1| 323|Caenorhabditis elegans Hypothetical pr... 27 6.2
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 8.1
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 8.1
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 8.1
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 27 8.1
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 27 8.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 8.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 8.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 8.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical
protein K05C4.6 protein.
Length = 678
Score = 44.8 bits (101), Expect = 4e-05
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 9 VRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAV--HHLVRLLMR 182
+R PVI+ L+ R P++KA +G++RN AL N L + H V L M
Sbjct: 415 LRFCQAFPVILDQLET-LRTPVIKAALGVIRNSALLQTNLIELTQEQTANGHTAVSLTM- 472
Query: 183 AYXDTQRQRSSSGGGANTAYADGVRMEEIVEGAVGALHILA 305
D R+ ++ DGV M ++EGAV ALH LA
Sbjct: 473 ---DILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLA 510
>AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein.
Length = 678
Score = 44.8 bits (101), Expect = 4e-05
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 9 VRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSANYAPLREHGAV--HHLVRLLMR 182
+R PVI+ L+ R P++KA +G++RN AL N L + H V L M
Sbjct: 415 LRFCQAFPVILDQLET-LRTPVIKAALGVIRNSALLQTNLIELTQEQTANGHTAVSLTM- 472
Query: 183 AYXDTQRQRSSSGGGANTAYADGVRMEEIVEGAVGALHILA 305
D R+ ++ DGV M ++EGAV ALH LA
Sbjct: 473 ---DILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLA 510
>U88170-7|AAO26016.1| 403|Caenorhabditis elegans Pantothenate
kinase protein 1,isoform c protein.
Length = 403
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 139 GNMAPFIIWCAC*CVPTTTPRDNAALRAVEPIPLTP 246
G+++P + CA +PTTTP + ALR + P TP
Sbjct: 18 GSVSPRV--CAADALPTTTPAASTALRQTQKAPKTP 51
>U88170-6|AAM15553.1| 392|Caenorhabditis elegans Pantothenate
kinase protein 1,isoform b protein.
Length = 392
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 139 GNMAPFIIWCAC*CVPTTTPRDNAALRAVEPIPLTP 246
G+++P + CA +PTTTP + ALR + P TP
Sbjct: 64 GSVSPRV--CAADALPTTTPAASTALRQTQKAPKTP 97
>U88170-5|AAB42246.2| 449|Caenorhabditis elegans Pantothenate
kinase protein 1,isoform a protein.
Length = 449
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 139 GNMAPFIIWCAC*CVPTTTPRDNAALRAVEPIPLTP 246
G+++P + CA +PTTTP + ALR + P TP
Sbjct: 64 GSVSPRV--CAADALPTTTPAASTALRQTQKAPKTP 97
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 6 AVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSAN 125
AVR+ GLPV+V+L++ P + +V AV +RNLA+ N
Sbjct: 841 AVRVEKGLPVLVELIRLPEDF-VVCAVATALRNLAIDPRN 879
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +3
Query: 6 AVRLHYGLPVIVKLLQPPSRWPLVKAVVGLVRNLALCSAN 125
AVR+ GLPV+V+L++ P + +V AV +RNLA+ N
Sbjct: 1011 AVRVEKGLPVLVELIRLPEDF-VVCAVATALRNLAIDPRN 1049
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 180 ASAGAPDDERRHVPATERSWRSRAPGCVPSPRRPSLEASEKEAVAASLSP 31
ASA APD ++ PA + S + PG S PS +E + +SP
Sbjct: 88 ASATAPDLKKEKAPAEKPSKPTAPPGVQKSSSSPSASKAESRPLRKRISP 137
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 192 RXRHASAGAP----DDERRHVPATERS----WRSRAPGCVPSPRRPSLEASEKEAVAASL 37
R R + A AP +RR P RS RSR+P P PRRP + SE++A A
Sbjct: 479 RRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPP--PPPRRPR-QDSEQQAPVAVK 535
Query: 36 SP 31
SP
Sbjct: 536 SP 537
>Z81508-2|CAB04143.1| 323|Caenorhabditis elegans Hypothetical
protein F20E11.4 protein.
Length = 323
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 325 VCCGFLWAKICKAPTAPSTISS 260
VCCG +W IC + S++ S
Sbjct: 131 VCCGVIWGMICGIALSESSLKS 152
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +1
Query: 187 TTTPRDNAALRAVEPIPLTPTAFVWRRSWKAPLEP 291
TTT EP TP W + W + EP
Sbjct: 236 TTTTEPTTTTTTTEPTTTTPKVNSWAKLWTSTAEP 270
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +1
Query: 187 TTTPRDNAALRAVEPIPLTPTAFVWRRSWKAPLEP 291
TTT EP TP W + W + EP
Sbjct: 232 TTTTEPTTTTTTTEPTTTTPKVNSWAKLWTSTAEP 266
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +1
Query: 187 TTTPRDNAALRAVEPIPLTPTAFVWRRSWKAPLEP 291
TTT EP TP W + W + EP
Sbjct: 175 TTTTEPTTTTTTTEPTTTTPKVNSWAKLWTSTAEP 209
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 99 RNLALCSANYAPLREHGAVHHLVRLLMRAY 188
RN+ + AP E+G H+++R LM+ Y
Sbjct: 1196 RNICKHFYDSAPAGEYGTSHYIIRALMQLY 1225
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -3
Query: 162 DDERRHVPATERSWRSRAP-GCVPSP--RRPSLEASEKEAV 49
DD RRH+PA+ + ++ P +P P S+++SE +A+
Sbjct: 304 DDVRRHIPASTSAPVAKHPEAAMPEPAAEHSSIQSSEAQAL 344
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 301 KICKAPTAPSTISSIRTPSA*AVLAPPPE 215
K K P P T + RTP AV+ P PE
Sbjct: 470 KTPKTPRTPRTPKTPRTPKTPAVVEPEPE 498
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 301 KICKAPTAPSTISSIRTPSA*AVLAPPPE 215
K K P P T + RTP AV+ P PE
Sbjct: 420 KTPKTPRTPRTPKTPRTPKTPAVVEPEPE 448
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 301 KICKAPTAPSTISSIRTPSA*AVLAPPPE 215
K K P P T + RTP AV+ P PE
Sbjct: 470 KTPKTPRTPRTPKTPRTPKTPAVVEPEPE 498
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 301 KICKAPTAPSTISSIRTPSA*AVLAPPPE 215
K K P P T + RTP AV+ P PE
Sbjct: 470 KTPKTPRTPRTPKTPRTPKTPAVVEPEPE 498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,525,737
Number of Sequences: 27780
Number of extensions: 225437
Number of successful extensions: 634
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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