Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308G01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.         34   0.13 
BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p pro...    34   0.13 
AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p pro...    34   0.13 
AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,...    34   0.13 
AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,...    34   0.13 
AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p pro...    33   0.31 
AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-P...    33   0.31 
AE014298-966|AAF46211.1|  933|Drosophila melanogaster CG4557-PA ...    31   0.95 

>U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.
          Length = 579

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRR 440
           LSP RN+    GG   S  +R A LFGQR F +RR
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERR 106



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 207 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 377
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALRGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 378 AP 383
           AP
Sbjct: 59  AP 60


>BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p
           protein.
          Length = 585

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRR 440
           LSP RN+    GG   S  +R A LFGQR F +RR
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERR 106



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 207 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 377
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 378 AP 383
           AP
Sbjct: 59  AP 60


>AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p
           protein.
          Length = 585

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRR 440
           LSP RN+    GG   S  +R A LFGQR F +RR
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERR 106



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 207 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 377
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 378 AP 383
           AP
Sbjct: 59  AP 60


>AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,
           isoform A protein.
          Length = 585

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRR 440
           LSP RN+    GG   S  +R A LFGQR F +RR
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERR 106



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 207 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 377
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 378 AP 383
           AP
Sbjct: 59  AP 60


>AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,
           isoform B protein.
          Length = 579

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRR 440
           LSP RN+    GG   S  +R A LFGQR F +RR
Sbjct: 72  LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERR 106



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 207 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 377
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 378 AP 383
           AP
Sbjct: 59  AP 60


>AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p
           protein.
          Length = 844

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 361 LQCQAELPHQWHLELRCLVNELLQTEGLQCQQLYLK 468
           L+C A +  QW+ E    VN+  QTE L  QQ Y++
Sbjct: 226 LECTANVAAQWNFETN--VNDFTQTEALNAQQRYVE 259


>AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-PB
           protein.
          Length = 844

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 361 LQCQAELPHQWHLELRCLVNELLQTEGLQCQQLYLK 468
           L+C A +  QW+ E    VN+  QTE L  QQ Y++
Sbjct: 226 LECTANVAAQWNFETN--VNDFTQTEALNAQQRYVE 259


>AE014298-966|AAF46211.1|  933|Drosophila melanogaster CG4557-PA
           protein.
          Length = 933

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 333 GALSPGRNSTAMPGGAPPSMASRATLFGQRAFADRRVTMPTT 458
           G  SPG N+TA   G+  + AS    F     A+  VT+P T
Sbjct: 38  GGASPGNNATAETPGSAATPASDTPTFFDNPHANEMVTIPPT 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,451,115
Number of Sequences: 53049
Number of extensions: 410165
Number of successful extensions: 1091
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)