Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p pro... 264 5e-71
AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p pro... 264 5e-71
AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC... 264 5e-71
AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p pro... 38 0.011
AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB... 38 0.011
AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC... 38 0.011
AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA... 38 0.011
BT022800-1|AAY55216.1| 323|Drosophila melanogaster IP13716p pro... 29 2.9
BT022769-1|AAY55185.1| 538|Drosophila melanogaster IP13916p pro... 29 2.9
AE014134-571|AAF51133.1| 528|Drosophila melanogaster CG3347-PA ... 29 2.9
AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical... 28 6.7
AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH1102... 28 6.7
AF145636-1|AAD38611.1| 683|Drosophila melanogaster BcDNA.GH0718... 28 6.7
AE014297-4283|AAF56830.1| 683|Drosophila melanogaster CG14526-P... 28 6.7
AE014297-4282|AAF56829.1| 700|Drosophila melanogaster CG14527-P... 28 6.7
AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA... 28 6.7
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece... 28 8.8
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece... 28 8.8
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece... 28 8.8
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece... 28 8.8
AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p pro... 28 8.8
AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p pro... 28 8.8
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ... 28 8.8
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD... 28 8.8
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC... 28 8.8
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB... 28 8.8
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA... 28 8.8
>AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p
protein.
Length = 208
Score = 264 bits (647), Expect = 5e-71
Identities = 124/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 182
GISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+
Sbjct: 2 GISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLE 61
Query: 183 TGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL 362
TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPL
Sbjct: 62 TGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPL 121
Query: 363 GRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 521
GRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+QF +GR+LAC
Sbjct: 122 GRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILAC 176
>AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p
protein.
Length = 208
Score = 264 bits (647), Expect = 5e-71
Identities = 124/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 182
GISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+
Sbjct: 2 GISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLE 61
Query: 183 TGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL 362
TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPL
Sbjct: 62 TGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPL 121
Query: 363 GRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 521
GRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+QF +GR+LAC
Sbjct: 122 GRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILAC 176
>AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC
protein.
Length = 208
Score = 264 bits (647), Expect = 5e-71
Identities = 124/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLD 182
GISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+
Sbjct: 2 GISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLE 61
Query: 183 TGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL 362
TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPL
Sbjct: 62 TGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPL 121
Query: 363 GRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAC 521
GRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+QF +GR+LAC
Sbjct: 122 GRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILAC 176
>AY060597-1|AAL28145.1| 664|Drosophila melanogaster GH01406p
protein.
Length = 664
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 204 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 368
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 369 KKGAKLTEAEEAIINKKRS 425
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>AE014134-1719|ABC65887.1| 664|Drosophila melanogaster CG5899-PB,
isoform B protein.
Length = 664
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 204 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 368
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 369 KKGAKLTEAEEAIINKKRS 425
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>AE014134-1718|ABC65886.1| 831|Drosophila melanogaster CG5899-PC,
isoform C protein.
Length = 831
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 204 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 368
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 161 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 220
Query: 369 KKGAKLTEAEEAIINKKRS 425
G L A+E +INK+ +
Sbjct: 221 MSGDLLNYAQE-LINKQNT 238
>AE014134-1717|AAF52824.1| 844|Drosophila melanogaster CG5899-PA,
isoform A protein.
Length = 844
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 204 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 368
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 369 KKGAKLTEAEEAIINKKRS 425
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>BT022800-1|AAY55216.1| 323|Drosophila melanogaster IP13716p
protein.
Length = 323
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 335 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 228
P+PE SC Y C I+RCI+ N++ T
Sbjct: 261 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 296
>BT022769-1|AAY55185.1| 538|Drosophila melanogaster IP13916p
protein.
Length = 538
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 335 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 228
P+PE SC Y C I+RCI+ N++ T
Sbjct: 476 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 511
>AE014134-571|AAF51133.1| 528|Drosophila melanogaster CG3347-PA
protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 335 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 228
P+PE SC Y C I+RCI+ N++ T
Sbjct: 466 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 501
>AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical
protein protein.
Length = 702
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 286 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 143
RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH11023
protein.
Length = 702
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 286 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 143
RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>AF145636-1|AAD38611.1| 683|Drosophila melanogaster BcDNA.GH07188
protein.
Length = 683
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 323
GN+K + NF +C T++ VY+ +++ + N + + T
Sbjct: 528 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 585
Query: 324 FRQWYESHYTLPLGRKKGAKLT 389
+R+WYE+ TLP G + K T
Sbjct: 586 YRKWYENQLTLPNGAQDMTKET 607
>AE014297-4283|AAF56830.1| 683|Drosophila melanogaster CG14526-PA
protein.
Length = 683
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 323
GN+K + NF +C T++ VY+ +++ + N + + T
Sbjct: 528 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 585
Query: 324 FRQWYESHYTLPLGRKKGAKLT 389
+R+WYE+ TLP G + K T
Sbjct: 586 YRKWYENQLTLPNGAQDMTKET 607
>AE014297-4282|AAF56829.1| 700|Drosophila melanogaster CG14527-PA
protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 323
GN+K + NF +C T++ VY+ +++ + N + + T
Sbjct: 545 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 602
Query: 324 FRQWYESHYTLPLGRKKGAKLT 389
+R+WYE+ TLP G + K T
Sbjct: 603 YRKWYENQLTLPNGAQDMTKET 624
>AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA
protein.
Length = 702
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 286 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 143
RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323
>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323
>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337
>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337
>AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p
protein.
Length = 741
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 37 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 213
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 449 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 506
Query: 214 QLAKPVSLMLCIMH-LTMNWCVQRP 285
L L+ C H + V+RP
Sbjct: 507 ALNHGSVLIECAKHEMHATTAVRRP 531
>AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p
protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 37 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 213
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 226 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 283
Query: 214 QLAKPVSLMLCIMH-LTMNWCVQRP 285
L L+ C H + V+RP
Sbjct: 284 ALNHGSVLIECAKHEMHATTAVRRP 308
>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
protein.
Length = 2252
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 37 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 213
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 1960 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 2017
Query: 214 QLAKPVSLMLCIMH-LTMNWCVQRP 285
L L+ C H + V+RP
Sbjct: 2018 ALNHGSVLIECAKHEMHATTAVRRP 2042
>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
isoform D protein.
Length = 5113
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324
>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
isoform C protein.
Length = 5127
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338
>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
isoform B protein.
Length = 5113
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324
>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
isoform A protein.
Length = 5127
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 97 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 228
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,048,364
Number of Sequences: 53049
Number of extensions: 486660
Number of successful extensions: 1373
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -