Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F11f
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036533-1|AAH36533.1| 748|Homo sapiens junctophilin 3 protein. 32 1.2
AB042640-1|BAB11987.1| 620|Homo sapiens junctophilin type3 prot... 32 1.2
AB042636-1|BAB11983.1| 748|Homo sapiens junctophilin type3 prot... 32 1.2
AK125511-1|BAC86188.1| 559|Homo sapiens rome) (ELN). protein. 31 2.7
CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin r... 29 8.3
CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin r... 29 8.3
CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin r... 29 8.3
BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein. 29 8.3
BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin r... 29 8.3
BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein. 29 8.3
AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin r... 29 8.3
AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin r... 29 8.3
AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin r... 29 8.3
AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens ... 29 8.3
AK023233-1|BAB14483.1| 373|Homo sapiens protein ( Homo sapiens ... 29 8.3
>BC036533-1|AAH36533.1| 748|Homo sapiens junctophilin 3 protein.
Length = 748
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 85 AHYDFEYSVHDQQSGDIKQQKESRAGDAVQGFYSLVQPDG 204
AH+ + SV +++ GDI+ E RAGD + + Q G
Sbjct: 499 AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGG 538
>AB042640-1|BAB11987.1| 620|Homo sapiens junctophilin type3
protein.
Length = 620
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 85 AHYDFEYSVHDQQSGDIKQQKESRAGDAVQGFYSLVQPDG 204
AH+ + SV +++ GDI+ E RAGD + + Q G
Sbjct: 371 AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGG 410
>AB042636-1|BAB11983.1| 748|Homo sapiens junctophilin type3
protein.
Length = 748
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 85 AHYDFEYSVHDQQSGDIKQQKESRAGDAVQGFYSLVQPDG 204
AH+ + SV +++ GDI+ E RAGD + + Q G
Sbjct: 499 AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGG 538
>AK125511-1|BAC86188.1| 559|Homo sapiens rome) (ELN). protein.
Length = 559
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 460 CRRSWQLGRCMRP*RWVRCRRSWQQEHCRRSWL 362
C W C RP W C SW C SWL
Sbjct: 523 CWHPWTWSWCRRPWTWSWCWCSWTWSWCWCSWL 555
>CR589951-1|CAM12871.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 347 MISPRSPS--PPLPTHIPPEPPRTP 369
>CR391992-3|CAM12872.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 347 MISPRSPS--PPLPTHIPPEPPRTP 369
>CR391992-2|CAI20111.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 337 MISPRSPS--PPLPTHIPPEPPRTP 359
>BC068508-1|AAH68508.1| 630|Homo sapiens PHACTR4 protein protein.
Length = 630
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 321 MISPRSPS--PPLPTHIPPEPPRTP 343
>BC029266-1|AAH29266.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 337 MISPRSPS--PPLPTHIPPEPPRTP 359
>BC021247-1|AAH21247.2| 686|Homo sapiens PHACTR4 protein protein.
Length = 686
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 321 MISPRSPS--PPLPTHIPPEPPRTP 343
>AL840643-2|CAM12873.1| 712|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 712
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 347 MISPRSPS--PPLPTHIPPEPPRTP 369
>AL840643-1|CAH73869.2| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 337 MISPRSPS--PPLPTHIPPEPPRTP 359
>AL670471-1|CAM12870.1| 702|Homo sapiens phosphatase and actin
regulator 4 protein.
Length = 702
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 337 MISPRSPS--PPLPTHIPPEPPRTP 359
>AK025436-1|BAB15130.1| 654|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21783 fis, clone HEP00284. ).
Length = 654
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 289 MISPRSPS--PPLPTHIPPEPPRTP 311
>AK023233-1|BAB14483.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ13171 fis, clone NT2RP3003819. ).
Length = 373
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 383 LLLPRSPTAHPSLRSHTPPQLPRSP 457
++ PRSP+ P L +H PP+ PR+P
Sbjct: 8 MISPRSPS--PPLPTHIPPEPPRTP 30
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,259,439
Number of Sequences: 237096
Number of extensions: 746413
Number of successful extensions: 4106
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4104
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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