Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F09f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 169 3e-41
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 158 6e-38
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 149 5e-35
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 145 6e-34
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 144 1e-33
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 140 1e-32
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 132 6e-30
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 125 5e-28
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 125 7e-28
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 120 3e-26
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 118 6e-26
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 117 1e-25
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 116 3e-25
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 115 6e-25
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 110 2e-23
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 108 9e-23
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 108 9e-23
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 102 6e-21
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 101 1e-20
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 100 2e-20
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 100 2e-20
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 99 5e-20
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 97 2e-19
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 93 5e-18
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 92 8e-18
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 89 8e-17
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 86 5e-16
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 85 1e-15
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 81 1e-14
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 68 1e-10
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 62 7e-09
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 5e-04
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 41 0.015
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 32 9.2
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 169 bits (412), Expect = 3e-41
Identities = 78/124 (62%), Positives = 98/124 (79%)
Frame = +1
Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70
Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 361 LDRI 372
LDRI
Sbjct: 131 LDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 158 bits (384), Expect = 6e-38
Identities = 67/122 (54%), Positives = 95/122 (77%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
+ VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV
Sbjct: 16 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGV 75
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 366
KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD
Sbjct: 76 GGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLD 135
Query: 367 RI 372
++
Sbjct: 136 QV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 149 bits (360), Expect = 5e-35
Identities = 70/120 (58%), Positives = 90/120 (75%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAILRH+YIR P G+
Sbjct: 15 VKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTG 73
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 372
+ K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 74 LCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 145 bits (351), Expect = 6e-34
Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRSP
Sbjct: 12 QHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPT 71
Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 342
GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 72 GVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 144 bits (349), Expect = 1e-33
Identities = 65/122 (53%), Positives = 87/122 (71%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV
Sbjct: 13 KFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGV 72
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 366
+ K++GG G+ PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLD
Sbjct: 73 GRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLD 132
Query: 367 RI 372
RI
Sbjct: 133 RI 134
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 140 bits (340), Expect = 1e-32
Identities = 59/108 (54%), Positives = 84/108 (77%)
Frame = +1
Query: 49 KVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNG 228
++++PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG
Sbjct: 50 QMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNG 109
Query: 229 VTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 372
P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 110 SRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 132 bits (318), Expect = 6e-30
Identities = 60/126 (47%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
+ +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I R +Y+R GV
Sbjct: 22 EFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGV 81
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGR 354
++ K++GG R GV HF ++SG + R LQ LE +K+VEK V GGR +T+ G+
Sbjct: 82 GSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQ 141
Query: 355 RDLDRI 372
+DLDRI
Sbjct: 142 QDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 125 bits (302), Expect = 5e-28
Identities = 55/120 (45%), Positives = 81/120 (67%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
+ V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +YIR +G
Sbjct: 20 EFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKLYIRGGIGT 79
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 366
KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 80 GEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 125 bits (301), Expect = 7e-28
Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
+ + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R +YIR GV
Sbjct: 15 EFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGV 74
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDL 363
T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR +T GRRDL
Sbjct: 75 ATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDL 134
Query: 364 DRI 372
DRI
Sbjct: 135 DRI 137
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 120 bits (288), Expect = 3e-26
Identities = 58/123 (47%), Positives = 77/123 (62%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +YI PVG
Sbjct: 10 DLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVG 69
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
++ + +GGRK G P F ++ GSI RKALQ LEA +EKV GR++T +GR L
Sbjct: 70 IERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFL 129
Query: 364 DRI 372
D+I
Sbjct: 130 DKI 132
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 118 bits (285), Expect = 6e-26
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR AA+ RHIY+R VGV
Sbjct: 87 KFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGV 146
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDL 363
+ K+ G K G P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDL
Sbjct: 147 GRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDL 206
Query: 364 DRI 372
DRI
Sbjct: 207 DRI 209
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 117 bits (282), Expect = 1e-25
Identities = 54/120 (45%), Positives = 78/120 (65%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
+K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y+ + +GV
Sbjct: 16 IKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMA 75
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 372
+ + +G + PSH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 76 LRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 116 bits (279), Expect = 3e-25
Identities = 56/122 (45%), Positives = 79/122 (64%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +YI PVG
Sbjct: 10 DLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVG 69
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
V ++ +GG+K G P F R SG+I R+ALQ LE L+++ ++ GR++T +GR L
Sbjct: 70 VNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFL 128
Query: 364 DR 369
D+
Sbjct: 129 DK 130
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 115 bits (277), Expect = 6e-25
Identities = 52/117 (44%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LRH+Y G
Sbjct: 34 DLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLRHLYFHPDSG 93
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 351
V + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 94 VDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 110 bits (265), Expect = 2e-23
Identities = 54/120 (45%), Positives = 76/120 (63%)
Frame = +1
Query: 7 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 186
++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+ PVGV
Sbjct: 11 ELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGV 70
Query: 187 KTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 366
+ +GGR+ G P F + SG+I RK LQ LE LVEK ++ GR++T +GR +D
Sbjct: 71 SRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 108 bits (259), Expect = 9e-23
Identities = 62/124 (50%), Positives = 76/124 (61%)
Frame = +1
Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH------- 208
Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RD
Sbjct: 209 ---------------RVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRD 253
Query: 361 LDRI 372
LDRI
Sbjct: 254 LDRI 257
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 108 bits (259), Expect = 9e-23
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = +1
Query: 10 IVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 189
+++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+Y+R VGV
Sbjct: 27 LIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHLYVRPNVGVG 86
Query: 190 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLD 366
++K +G ++RNG +H +S I R L L++L LVE G R L+ QG+R+LD
Sbjct: 87 ALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELD 146
Query: 367 RI 372
I
Sbjct: 147 SI 148
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 102 bits (244), Expect = 6e-21
Identities = 53/123 (43%), Positives = 73/123 (59%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +YI PVG
Sbjct: 10 DLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVG 67
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
++ + +GGRKR G P F + SG+I R AL LE L V+K ++ GR++T GR L
Sbjct: 68 IERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVTPMGRSFL 126
Query: 364 DRI 372
D++
Sbjct: 127 DKV 129
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 101 bits (241), Expect = 1e-20
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +Y+ P+G
Sbjct: 10 DHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRVYVDGPLG 69
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRD 360
V+ + +GG K G P+ F + SGS+ RKALQ LEA L+ V D GR ++ G
Sbjct: 70 VERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAF 127
Query: 361 LDRI 372
LD +
Sbjct: 128 LDSV 131
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 100 bits (239), Expect = 2e-20
Identities = 49/120 (40%), Positives = 71/120 (59%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
+KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA+LR IY+R VG
Sbjct: 40 IKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAIYLRPGVGYGG 99
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 372
++K FG +K G P H SS A +SL L LVE G+ LT +G + D +
Sbjct: 100 LSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQRLTRKGHKFADSL 159
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 100 bits (239), Expect = 2e-20
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILRH+Y G
Sbjct: 34 DVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILRHLYFHPDEG 93
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 351
+ + +++ RKR G P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 94 IGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 99.1 bits (236), Expect = 5e-20
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = +1
Query: 4 DKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR-SP 177
D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR +Y P
Sbjct: 10 DLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEP 69
Query: 178 VGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRR 357
+G++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV GR ++ GR
Sbjct: 70 IGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRS 129
Query: 358 DLD 366
LD
Sbjct: 130 LLD 132
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R IY+R GV
Sbjct: 67 IRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGN 126
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-----VQDGGRILTTQGRR 357
+T +FG NG S SG + R LQ LE +K+++K ++ G RI+T +G++
Sbjct: 127 LTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDNKSLLKKGSRIVTKEGQQ 182
Query: 358 DLDRI 372
DL+RI
Sbjct: 183 DLNRI 187
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 92.7 bits (220), Expect = 5e-18
Identities = 42/115 (36%), Positives = 67/115 (58%)
Frame = +1
Query: 28 AHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIF 207
A + K + P + VKT + P + DW++ RCA+I+R IY+ P+G+ + K +
Sbjct: 17 AEILKNEDIPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDY 76
Query: 208 GGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 372
GG K +G +H + G+I R A+ LE L +EKV+ GRI++ QG + LDR+
Sbjct: 77 GGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 91.9 bits (218), Expect = 8e-18
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +Y++ G+ T
Sbjct: 19 IREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVYLKPHTGIST 78
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-----GRILTTQGRR 357
+ IFG K G + G I R AL+SLE LK++ K ++ R++T +G
Sbjct: 79 LKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDKNSATKKFSRVITKEGMT 138
Query: 358 DLDRI 372
+L+RI
Sbjct: 139 ELNRI 143
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 88.6 bits (210), Expect = 8e-17
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +1
Query: 13 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKT 192
+ A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +YI +GV
Sbjct: 59 ISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLYIHPDIGVGF 118
Query: 193 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQGRRDLD 366
+ + F ++R GV P+H +SG I R LQ LE + VE+ + GR LTT+G ++
Sbjct: 119 LRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIGYVEQNPKKKGRRLTTKGENAIN 177
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 85.8 bits (203), Expect = 5e-16
Identities = 45/123 (36%), Positives = 69/123 (56%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 19 DVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYLHHDAS 78
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
+ + +G + P H +S + R LQ LE LV +V + GR LT +G++ L
Sbjct: 79 LSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLTPKGQKLL 137
Query: 364 DRI 372
D+I
Sbjct: 138 DQI 140
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/123 (33%), Positives = 71/123 (57%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
+ + +GG K G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + L
Sbjct: 63 INGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKL 122
Query: 364 DRI 372
DR+
Sbjct: 123 DRL 125
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 81.4 bits (192), Expect = 1e-14
Identities = 45/121 (37%), Positives = 63/121 (52%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR +YI +G
Sbjct: 10 DMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLG 69
Query: 184 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 363
+ ++ +GG+ G H S SI R LE+ LV+K Q GR L+ QG L
Sbjct: 70 ISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLL 128
Query: 364 D 366
D
Sbjct: 129 D 129
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/122 (25%), Positives = 69/122 (56%)
Frame = +1
Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
+D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ YI +
Sbjct: 10 KDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFYIYKKL 69
Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
G + + +I+ G+K+ S SG I R +++ LE +K+++K + G L+ + + +
Sbjct: 70 GTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSKKAQNE 127
Query: 361 LD 366
+D
Sbjct: 128 ID 129
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 62.1 bits (144), Expect = 7e-09
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +1
Query: 4 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 183
D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR + P+G
Sbjct: 22 DALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRKVAQNEPIG 79
Query: 184 VKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQG 351
++ + +G +KR V P S + R +LQ+LE LV GR ++ G
Sbjct: 80 IERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQALEEDGLVTTAAGEGRRISDDG 139
Query: 352 RRDLDRI 372
L +
Sbjct: 140 EAFLSEV 146
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 211 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 303
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 41.1 bits (92), Expect = 0.015
Identities = 31/123 (25%), Positives = 57/123 (46%)
Frame = -3
Query: 369 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDS 190
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 189 LYSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNN 10
+ V + + GS++ +EP+ ++ S+LF L +H F S +
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGCQSSDE 144
Query: 9 LVL 1
L+L
Sbjct: 145 LLL 147
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 200 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 298
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 70 MDLVKTARFKELAPYDPDWF-YVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 240
+DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+
Sbjct: 590 VDLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPN 647
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,042,042
Number of Sequences: 1657284
Number of extensions: 8754790
Number of successful extensions: 20298
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20283
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -