BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F09f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 169 4e-42 BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 169 4e-42 BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 169 4e-42 BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 169 4e-42 BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 169 4e-42 AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 169 4e-42 AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 2.4 DQ098802-1|AAZ13730.1| 108|Homo sapiens immunoglobulin lambda l... 30 5.7 AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 5.7 AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 5.7 AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 5.7 AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 5.7 AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 5.7 AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 5.7 AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 5.7 AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR2... 29 7.5 >M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein protein. Length = 145 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130 Query: 361 LDRI 372 LDRI Sbjct: 131 LDRI 134 >BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 protein. Length = 145 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130 Query: 361 LDRI 372 LDRI Sbjct: 131 LDRI 134 >BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 protein. Length = 157 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 23 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 82 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 83 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 142 Query: 361 LDRI 372 LDRI Sbjct: 143 LDRI 146 >BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 protein. Length = 145 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130 Query: 361 LDRI 372 LDRI Sbjct: 131 LDRI 134 >BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 protein. Length = 145 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130 Query: 361 LDRI 372 LDRI Sbjct: 131 LDRI 134 >AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 protein. Length = 145 Score = 169 bits (412), Expect = 4e-42 Identities = 78/124 (62%), Positives = 98/124 (79%) Frame = +1 Query: 1 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180 Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R Sbjct: 11 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGA 70 Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360 GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130 Query: 361 LDRI 372 LDRI Sbjct: 131 LDRI 134 >AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit variant protein. Length = 249 Score = 31.1 bits (67), Expect = 2.4 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = +1 Query: 112 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 282 Y P R +LR P G + T + GGR+ G S CR G R+AL Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235 >DQ098802-1|AAZ13730.1| 108|Homo sapiens immunoglobulin lambda light chain variable region protein. Length = 108 Score = 29.9 bits (64), Expect = 5.7 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = -2 Query: 313 SQQASMPPTIAKPCVQYCLMTCRNVKV*LHYVCAHQRSW*QS-LLQQVSECKYDEGWQHN 137 S + + PP+++ Q +TC K+ YVC +Q+ QS +L + K G Sbjct: 1 SYELTQPPSVSVSPGQTARITCSGDKLGNEYVCWYQQKSGQSPVLVIYQDSKRSSGTPER 60 Query: 136 AHRTNQGHTEPAL*SELSLQD 74 +N G+T S + +D Sbjct: 61 FSGSNSGNTATLTISGVQAED 81 >AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) protein. Length = 2039 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639 >AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1 protein. Length = 132 Score = 29.9 bits (64), Expect = 5.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT ++IR C GF +VG +++GRW Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123 >AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR25 protein. Length = 116 Score = 29.5 bits (63), Expect = 7.5 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 237 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 329 FT +++R C GF +VG +++GRW Sbjct: 84 FTLTEIVRFRCQPGFVMVGSHTVQCQTNGRW 114 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 72,871,236 Number of Sequences: 237096 Number of extensions: 1483870 Number of successful extensions: 2954 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2954 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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