Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   191   4e-49
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   191   4e-49
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   191   4e-49
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   191   4e-49
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   191   4e-49
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   191   6e-49
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   160   1e-39
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   160   1e-39
AY061282-1|AAL28830.1|  378|Drosophila melanogaster LD20087p pro...    28   8.8  
AE014134-264|AAF51367.2|  378|Drosophila melanogaster CG7420-PA ...    28   8.8  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  191 bits (466), Expect = 4e-49
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  191 bits (466), Expect = 4e-49
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  191 bits (466), Expect = 4e-49
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  191 bits (466), Expect = 4e-49
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  191 bits (466), Expect = 4e-49
 Identities = 87/124 (70%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  191 bits (465), Expect = 6e-49
 Identities = 86/124 (69%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K VA  LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP 
Sbjct: 11  QHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASILRHLYHRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RD
Sbjct: 71  GVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRD 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  160 bits (388), Expect = 1e-39
 Identities = 74/124 (59%), Positives = 91/124 (73%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K +AA LKK+GK+ VPE    +KT +FKE AP D DWFY RCA+I+RH+Y+RSP 
Sbjct: 11  QHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV   TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGGR LT QG+R+
Sbjct: 71  GVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRN 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  160 bits (388), Expect = 1e-39
 Identities = 74/124 (59%), Positives = 91/124 (73%)
 Frame = +1

Query: 1   QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 180
           Q  + K +AA LKK+GK+ VPE    +KT +FKE AP D DWFY RCA+I+RH+Y+RSP 
Sbjct: 11  QHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPA 70

Query: 181 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 360
           GV   TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGGR LT QG+R+
Sbjct: 71  GVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRN 130

Query: 361 LDRI 372
           LDRI
Sbjct: 131 LDRI 134


>AY061282-1|AAL28830.1|  378|Drosophila melanogaster LD20087p
           protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -2

Query: 406 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 233
           P   P +EP QR   GL +      D++  +  +  +  PP I       CL  C  VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198

Query: 232 *LH 224
            +H
Sbjct: 199 QVH 201


>AE014134-264|AAF51367.2|  378|Drosophila melanogaster CG7420-PA
           protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -2

Query: 406 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 233
           P   P +EP QR   GL +      D++  +  +  +  PP I       CL  C  VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198

Query: 232 *LH 224
            +H
Sbjct: 199 QVH 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,239,943
Number of Sequences: 53049
Number of extensions: 435805
Number of successful extensions: 964
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)