Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F08f
         (456 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2F4V2 Cluster: Putative uncharacterized protein; n=1; ...    34   1.3  
UniRef50_Q8ELP0 Cluster: Transcriptional regulator; n=1; Oceanob...    31   8.9  
UniRef50_A2Y819 Cluster: Putative uncharacterized protein; n=2; ...    31   8.9  
UniRef50_Q0UWJ5 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   8.9  
UniRef50_O74504 Cluster: Uncharacterized protein C594.01; n=1; S...    31   8.9  

>UniRef50_A2F4V2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 453

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 31  SEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKKSISTPDITLE 177
           SE++S ++   C SG C L C+ RE   D  +  + M     T ++TLE
Sbjct: 269 SEVNSGNYNRLC-SGRCILFCEGREIAEDIKIGANAMNIETGTINLTLE 316


>UniRef50_Q8ELP0 Cluster: Transcriptional regulator; n=1;
           Oceanobacillus iheyensis|Rep: Transcriptional regulator
           - Oceanobacillus iheyensis
          Length = 287

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = +1

Query: 1   LIDFEGLVKKSEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKKSISTPDITLED 180
           L+ F+ +V K     ++ +      + T H  + ES  + I  F+ M KSIS        
Sbjct: 6   LVTFKTIVDKGGFKKAADELGYAQSSITAHIHDLESELE-IPLFNRMGKSISLTQAGETF 64

Query: 181 SPYSTAGLSNLPKNKSVPRNLEEPYAVV 264
            PY+   +    ++K   RN EEP  +V
Sbjct: 65  LPYAMEIIDLYSESKDRLRNTEEPSGIV 92


>UniRef50_A2Y819 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 194

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = +1

Query: 25  KKSEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKKSISTPDITLEDSPYSTAGL 204
           +KS+ S    +CF +S  CT  CK +E    F VK S   +S + PD    D   +T GL
Sbjct: 113 RKSKCSKLYCECFKNSVGCTAKCKCQECSNSFGVKNS---ESSNKPD---PDDKSATDGL 166

Query: 205 SN 210
           ++
Sbjct: 167 TH 168


>UniRef50_Q0UWJ5 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 499

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = +1

Query: 13  EGLVKKSEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKKSISTPDITLEDSPYS 192
           E  V   E S++          CT+ C +   P D  +  +V  +  S PD+++ + P  
Sbjct: 296 EQSVNDQEHSTTQHDTLSSDDFCTISCPSSGCPVDVSLDETVSTEQYSVPDVSIPELPVE 355

Query: 193 TA 198
            A
Sbjct: 356 VA 357


>UniRef50_O74504 Cluster: Uncharacterized protein C594.01; n=1;
           Schizosaccharomyces pombe|Rep: Uncharacterized protein
           C594.01 - Schizosaccharomyces pombe (Fission yeast)
          Length = 791

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 14/67 (20%), Positives = 32/67 (47%)
 Frame = +1

Query: 94  KNRESPTDFIVKFSVMKKSISTPDITLEDSPYSTAGLSNLPKNKSVPRNLEEPYAVVKVD 273
           + + S T  +   + +KK +STP+  +E+        SN P +K +P++++        +
Sbjct: 554 REQTSITSGVPPSNRLKKHVSTPEKIVEERSIDEVSQSNTPSSKQLPQSVDGKTVTANAN 613

Query: 274 GNSAXKK 294
             +  K+
Sbjct: 614 STTVAKQ 620


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,517,981
Number of Sequences: 1657284
Number of extensions: 5385629
Number of successful extensions: 13209
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13205
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)