Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F08f
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    25   0.44 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   1.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   1.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   2.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.5  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 4   IDFEGLVKKSEISSSSFQCFCDSGACT 84
           ID E ++K   +  + F C  + G C+
Sbjct: 31  IDLEEILKSDRLLKNYFNCLMERGTCS 57


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 4   IDFEGLVKKSEISSSSFQCFCDSGACT 84
           I+ + ++    +  + F C  D GACT
Sbjct: 26  INVDEILASERLLKNYFNCIMDRGACT 52


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +1

Query: 124 VKFSVMKKSISTPDITLEDSPYSTAGLSNLPKNKSVP 234
           + FS     I  PD+     P+    L  LPK K  P
Sbjct: 188 ILFSAEGVEIRIPDVIKTSGPHKFQPLLRLPKFKKKP 224


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +1

Query: 4   IDFEGLVKKSEISSSSFQCFCDSGACTLHCKNRES 108
           ID + ++    +  +   C  D G CT   K  +S
Sbjct: 26  IDIDDILSNERLLKNYVNCLLDKGRCTPEGKKLKS 60


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 7   DFEGLVKKSEISSSSFQCFCDSGACT 84
           + +  +K   +  S F+C   +G CT
Sbjct: 27  ELDAALKSERLMKSYFECLLGTGKCT 52


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = +1

Query: 4   IDFEGLVKKSEISSSSFQCFCDSGACT 84
           +D + ++    + ++  +C  D G CT
Sbjct: 30  VDVDKILNNDRVLTNYIKCLMDEGPCT 56


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   LIDFEGLVKKSEISSSSFQCFCDSGACT 84
           L + + ++K  +++ +   C  D G CT
Sbjct: 25  LREIDTILKNDQMTRNYLDCVLDKGKCT 52


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 224 NPCRGTSKNRTLLSKWTXIVP 286
           N C+ T K    L +W  +VP
Sbjct: 213 NICQATHKQLFQLVQWAKLVP 233


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 175 EDSPYSTAGLSNLPKNKSVPRNLEEPYAVVKV 270
           E S  STA  +NL        NL++ +A V +
Sbjct: 11  EKSQLSTADTANLINKSLGKHNLQKSFAKVVI 42


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 175 EDSPYSTAGLSNLPKNKSVPRNLEEPYAVVKV 270
           E S  STA  +NL        NL++ +A V +
Sbjct: 11  EKSQLSTADTANLINKSLGKHNLQKSFAKVVI 42


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 175 EDSPYSTAGLSNLPKNKSVPRNLEEPYAVVKV 270
           E S  STA  +NL        NL++ +A V +
Sbjct: 11  EKSQLSTADTANLINKSLGKHNLQKSFAKVVI 42


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 423 DSPSWAYNSG 452
           D  SW YNSG
Sbjct: 288 DESSWFYNSG 297


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 46  SSFQCFCDSGACTLHCKNR 102
           +S+ C C  G    +C+NR
Sbjct: 43  NSYICTCKPGFTGSNCQNR 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,101
Number of Sequences: 336
Number of extensions: 1380
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)