Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F08f
         (456 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0298 + 29072111-29072169,29072281-29072518,29072660-290727...    30   0.77 
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757...    30   1.0  
04_04_1287 - 32390422-32391588,32392472-32392645                       29   1.8  
09_04_0298 + 16475693-16475849,16476148-16476265,16476364-164764...    27   7.2  
02_05_0959 + 33086498-33086544,33087295-33087967,33088665-330890...    27   9.5  

>05_07_0298 +
           29072111-29072169,29072281-29072518,29072660-29072740,
           29072831-29072897,29073055-29073191,29073319-29073321
          Length = 194

 Score = 30.3 bits (65), Expect = 0.77
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = +1

Query: 25  KKSEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKKSISTPDITLEDSPYSTAGL 204
           +KS+ S    +CF +S  CT  CK  E    F VK S   +S + PD    D   +T GL
Sbjct: 113 RKSKCSKLYCECFKNSVGCTAKCKCLECSNSFGVKNS---ESSNKPD---PDDKSATDGL 166

Query: 205 SN 210
           ++
Sbjct: 167 TH 168


>03_06_0415 -
           33775143-33775305,33775438-33775565,33775654-33775761,
           33775809-33775909,33776265-33776805,33777290-33777847
          Length = 532

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
 Frame = +1

Query: 97  NRESPTDFIVKFSVMK----KSISTP-----DITLEDSPYSTAGLSNLPKNKSVPRNLEE 249
           + +  + ++VKF + K    +SI+T      D +LED       LS + KNKS+P  ++E
Sbjct: 225 DEDGGSGYLVKFKIAKVVPEQSIATDHAGEYDESLEDD-IKKKRLSKVSKNKSLPYEVDE 283

Query: 250 PYAVVKVDGNSAXKKLE 300
            + + +  G    KKL+
Sbjct: 284 DFTMYR-SGRDGRKKLK 299


>04_04_1287 - 32390422-32391588,32392472-32392645
          Length = 446

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +1

Query: 97  NRESPTDFIVKFSVMKKSISTPDITLEDSPYSTAGLSNLPKNKSVP 234
           N  +  D +V       S STP  T E  PY+T    + P+  S P
Sbjct: 223 NENATVDTVVVDKYANSSDSTPATTEEPHPYNTTASESNPQENSSP 268


>09_04_0298 +
           16475693-16475849,16476148-16476265,16476364-16476467,
           16478794-16478808,16479276-16479481,16479567-16479719,
           16479842-16480123
          Length = 344

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 138 NRKFHNEIRGRLTIFTMKGAGTGITKALKRRR 43
           + KF+N ++ ++T + +  A  G+TKA K R+
Sbjct: 256 DNKFNNNLKKQITGWNLGKAVQGVTKAFKLRK 287


>02_05_0959 +
           33086498-33086544,33087295-33087967,33088665-33089058,
           33089140-33089210,33089373-33089497,33089705-33089821,
           33094128-33094238,33094321-33094413,33094726-33094984,
           33095067-33095189
          Length = 670

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
 Frame = +1

Query: 7   DFEGLVKKSEISSSSFQCFCDSGACTLHCKNRESPTDFIVKFSVMKK------SISTPDI 168
           DF GL  K+ +  S      +S   T    +R+ P D I  FS M+K       +S   +
Sbjct: 72  DFRGLSGKTNLGRSESSKSNNSDDETHQFWHRQLPDDIIPDFSDMEKVEQQHGELSFSGL 131

Query: 169 TLEDSPYSTAGLSNLPK 219
           +L   P+     SNL +
Sbjct: 132 SLNAPPFFGTAASNLSR 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,392,456
Number of Sequences: 37544
Number of extensions: 144016
Number of successful extensions: 330
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)