BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F05f (521 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.18 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.18 AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.18 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.18 AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.18 AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 0.18 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.18 AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 26 0.18 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.18 AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.54 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.6 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.6 EF532798-1|ABQ08060.1| 50|Tribolium castaneum acetylcholineste... 22 3.8 DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 8.7 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 8.7 >AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax protein. Length = 230 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 26.2 bits (55), Expect = 0.18 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Frame = -1 Query: 467 CQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT-PFLPAESTSMLSTPAPARP 291 C +W+ G G PE + ++ P + +P P A S + P P+ P Sbjct: 8 CPKRMKWEGGEEGSPEEGDKLE-GDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSP 66 Query: 290 TTFSFTP 270 + S P Sbjct: 67 RSISEDP 73 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax protein. Length = 157 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 26.2 bits (55), Expect = 0.18 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -1 Query: 506 QRARCQCTEPGPTC-QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPT 348 Q+AR Q + PG P+A P P Q H +A APG + PT Sbjct: 16 QQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPT 69 >AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger protein protein. Length = 456 Score = 24.6 bits (51), Expect = 0.54 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 449 WKLGPRGEPEPTST 408 WK P+G P P+ST Sbjct: 67 WKKSPQGAPSPSST 80 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 23.0 bits (47), Expect = 1.6 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +3 Query: 96 GFDRRRGWRQVCRTPQRLRNRHHYQG 173 G D++ W + CR ++L R ++ G Sbjct: 579 GLDQQNQWCKPCRPREQLTWRRNFHG 604 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 23.0 bits (47), Expect = 1.6 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +3 Query: 96 GFDRRRGWRQVCRTPQRLRNRHHYQG 173 G D++ W + CR ++L R ++ G Sbjct: 471 GLDQQNQWCKPCRPREQLTWRRNFHG 496 >EF532798-1|ABQ08060.1| 50|Tribolium castaneum acetylcholinesterase protein. Length = 50 Score = 21.8 bits (44), Expect = 3.8 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +3 Query: 138 PQRLRNRHH 164 PQRLR RHH Sbjct: 21 PQRLRIRHH 29 >DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. Length = 822 Score = 20.6 bits (41), Expect = 8.7 Identities = 4/10 (40%), Positives = 7/10 (70%) Frame = +3 Query: 417 WFWLATWSQL 446 W+W+ WS + Sbjct: 629 WYWVMDWSDM 638 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 20.6 bits (41), Expect = 8.7 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -2 Query: 316 CPHQLQHDRPPSASRLRPTP 257 C QLQ + SASR +P Sbjct: 182 CRQQLQQQQNKSASRTTTSP 201 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.316 0.132 0.396 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 111,317 Number of Sequences: 336 Number of extensions: 2261 Number of successful extensions: 15 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 12573240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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