Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F05f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 61 9e-11
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.005
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 29 0.42
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 29 0.42
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.42
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 0.73
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 0.73
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 0.73
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.97
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 1.3
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 27 1.7
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 2.2
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 2.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.2
SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosacch... 27 2.2
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 27 2.2
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 3.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 5.2
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 25 5.2
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 5.2
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 6.8
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 6.8
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 6.8
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 6.8
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 6.8
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.0
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 9.0
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 9.0
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 61.3 bits (142), Expect = 9e-11
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +1
Query: 85 DIKSVLIVDGVGAKCAELLNAYGIATT-TKAKISKEELLMEIPNHDALVVRSATQVTKEV 261
DIK +L+++ V L G K +S+++L+ +I A+ +RS T++T+ V
Sbjct: 55 DIK-ILLLENVNQSALSNLKDEGYQVEFLKTSMSEDDLVEKIKGVHAIGIRSKTRLTRRV 113
Query: 262 LDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 399
L+A L V+G G + +D+D A ++G+ V N+P AN+ S EL
Sbjct: 114 LEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAEL 159
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 413 MLVLARHVVPASTALKAGRWDRALYTGSELAGKTL 517
++ LAR V S L G W++ E+ GKTL
Sbjct: 164 IISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTL 198
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.5 bits (78), Expect = 0.005
Identities = 42/135 (31%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Frame = -1
Query: 470 TCQPSAQWKLGPRGEPEP-TSTXQVSSHALSALA-PGALITP-TPFLPAESTSMLSTPAP 300
T S+ G P P TST +S ++ +L TP TP +P STS S P P
Sbjct: 92 TSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 151
Query: 299 ARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLA 120
PT+ S T ++ L T TT S + + SSSL +S +
Sbjct: 152 --PTSTSSTDTNSNPLPTTSTSCTTSTS-IPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 208
Query: 119 PTPSTIKTDLMSTTI 75
PT ST TD S+ +
Sbjct: 209 PT-STSSTDTNSSPL 222
Score = 33.5 bits (73), Expect = 0.020
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -1
Query: 461 PSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITP-TPFLPAESTSMLSTPAPARPTT 285
P++ G P P+++ ++ + S G TP TP +P STS STP P P +
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTT-STSIPPTGNSTTPVTPTVPPTSTSSTSTPPP--PAS 375
Query: 284 FSFTPASNTSLVT*VAERTTRAS 216
S T S++ L++ TT S
Sbjct: 376 TSSTGTSSSPLLSTSTSCTTSTS 398
Score = 32.3 bits (70), Expect = 0.045
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = -1
Query: 461 PSAQWKLGPRGEPEPT-STXQVSSHALSALA-PGALITP-TPFLPAESTSMLSTPAPARP 291
P++ P PT ST +S ++ +L TP TP +P STS S P P P
Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP--P 209
Query: 290 TTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLAPTP 111
T+ S T +++ L T TT S + SSSL +S + PT
Sbjct: 210 TSTSSTDTNSSPLPTTSTSCTTSTSI--PTGGSSSLSTPITPTVPPTSTSSTSIPIPPT- 266
Query: 110 STIKTDLMSTTI 75
ST TD S+ +
Sbjct: 267 STSSTDTNSSPL 278
Score = 31.5 bits (68), Expect = 0.079
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 419 PTSTXQVSSHALSALAP-GALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246
P T S +++ P G TP TP +P STS STP P P + S T S++ L +
Sbjct: 277 PLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP--PASTSSTGTSSSPLPS 334
Query: 245 *VAERTTRAS 216
TT S
Sbjct: 335 TSTSCTTSTS 344
Score = 26.2 bits (55), Expect = 3.0
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*V 240
P +T ++ + S L +T TP T+ S P + P T S S+++ VT
Sbjct: 526 PVTTTNCTT-STSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTST 584
Query: 239 AERTTRAS 216
TT +
Sbjct: 585 PVTTTNCT 592
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = -1
Query: 425 PEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246
P +T ++S +LS++ + T + + ++ + ++ S+TPAS+TS T
Sbjct: 699 PSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASSTSTTT 758
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 359 ITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 216
+T TP T+ S P + P T S S+++ VT TT +
Sbjct: 486 VTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCT 533
Score = 24.6 bits (51), Expect = 9.0
Identities = 23/95 (24%), Positives = 36/95 (37%)
Frame = -1
Query: 356 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEX 177
T TP + T STP + P T + S + L T +T + + S+S+
Sbjct: 505 TSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCT-TSTSVPY 563
Query: 176 XXXXXXXXXXXLRSSAHLAPTPSTIKTDLMSTTIL 72
+ SS + TP T ST++L
Sbjct: 564 TSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 598
>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 497
Score = 29.1 bits (62), Expect = 0.42
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = -1
Query: 512 SCQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPA 333
+C+R R +C E P C K E P S Q+ A+ +++P L + P
Sbjct: 38 TCRRRRIKCDETKPFCLNCT--KTNRECEGYPNSAAQM--QAMGSVSPPELSVHSAQQPL 93
Query: 332 ESTSMLSTPAPARPTTFSFTPASN 261
TS+ S+ A TFS + SN
Sbjct: 94 IPTSIASSSAQT-GDTFSGSSQSN 116
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 29.1 bits (62), Expect = 0.42
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 277 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAP 369
KL V G AG +N+DVD A + GV V N P
Sbjct: 85 KLFVTG--AAGYNNVDVDWATRNGVYVANTP 113
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.42
Identities = 17/54 (31%), Positives = 34/54 (62%)
Frame = -1
Query: 422 EPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 261
+P S+ +SS + SA +P + ++ + + +E +S L + + A P+T S TP+S+
Sbjct: 477 QPQSSTPISSSS-SASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSS 529
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 0.73
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = -1
Query: 425 PEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246
P P + + ++SAL+ + + PT + S S PAP P + S +P ++ V
Sbjct: 217 PFPRESTEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVK 276
Query: 245 *VAERTTR 222
+R
Sbjct: 277 TTTSNASR 284
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 SVAARRSEEAHTSIKLNNDSTTKPRWSWTLSRF*SSTG 115
SVAA R+ A ++ NND T P+ + +S F S G
Sbjct: 415 SVAALRARFAKANVSENNDPPTFPKTAAKISSFNSKAG 452
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 0.73
Identities = 28/99 (28%), Positives = 41/99 (41%)
Frame = -1
Query: 485 TEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTP 306
T P PT PS P P + + + A L P A I P + L
Sbjct: 414 TPPVPT-PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 305 APARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSS 189
APA P + PA+ + + + ++ RA+ L SIR+S
Sbjct: 473 APAPPPAPAPAPAAPVASIAELPQQDGRAN-LMASIRAS 510
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 0.97
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = -1
Query: 332 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXX 153
ES+S+ +T +P +TF T +S +S+ T + ++ S +S+ SSS
Sbjct: 238 ESSSLTNTVSPTE-STFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTS--------S 288
Query: 152 XXXLRSSAHLAPTPSTIKTDLMSTT 78
+ S + TPSTI T + T
Sbjct: 289 SGSSQDSTTIDSTPSTIATSTLQPT 313
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 27.5 bits (58), Expect = 1.3
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALS-ALAPGALI-TPTPFLPAESTSMLSTP 306
PGP PSA + G + SHA A P A + + PA +T +S P
Sbjct: 251 PGPISVPSAPY--GRASSTIAEVSPMYGSHAAPYASTPSAAVGSSRGSTPASATVPIS-P 307
Query: 305 APARPTTFSFTPA 267
A PTT ++ PA
Sbjct: 308 ARGFPTTSAYNPA 320
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 338 PAESTSMLSTPAPARPTTFSFTPASNTS 255
P+ ++ +PAP T S +PA+NTS
Sbjct: 125 PSSISNSSESPAPINSATASMSPANNTS 152
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -1
Query: 416 TSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSL 252
TST +S+ S AP + P+P + + ++L+ P A P + S+ P S T++
Sbjct: 330 TSTDLPTSNLPSQNAPARPVEPSPSI--QPPNLLNLPT-ASPESTSWLPGSQTNI 381
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 KEVLD-AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGA 375
KE++D +K + GAG + +DV + +G+ V + P A
Sbjct: 71 KEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKA 112
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 184 KEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIN 363
KEE +I + +TQ+ + +K + + A +D+I DS G G +N
Sbjct: 660 KEEAQKQISQSLIADQQLSTQIGSVGMGKKQAVKELRKLQAKIDSIIADSMSPMGTGAVN 719
Query: 364 AP 369
+P
Sbjct: 720 SP 721
>SPBC30D10.06 |lsm4||U6 snRNP-associated protein
Lsm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 141 QRLRNRHHYQGQDLQGRTSYGDTQPRRSG 227
QR ++G+ +GR +YG T P R G
Sbjct: 86 QRENRGSRFRGRGQRGRGNYGHTAPNRRG 114
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = -1
Query: 509 CQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAE 330
C++ + +C+ P+CQ + K+ P + S A L+P I P+L +
Sbjct: 27 CRQKKIKCSGEKPSCQACSNNKVECIWPDRPNMRGKKPSSAARTLSPLTGIV-QPYLGSH 85
Query: 329 --STSMLSTPAPARPTTFS 279
S ++LS +P T+S
Sbjct: 86 PFSPTILSPSSPNMDFTYS 104
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 398 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255
S H + P L P+ F+ A+ S L TP P P + S P S
Sbjct: 152 SDHPIDLDNPEHLTPPSSFITAKQLSRLPTPLP--PPSSSSLPTGTIS 197
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = -1
Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 297
P + T ++ A +A P A P P +P + + ++TP A
Sbjct: 339 PSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPVAA 385
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -1
Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 297
P +PT+ S+HA + P + P P + + PAP+
Sbjct: 1427 PLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPS 1473
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Frame = -1
Query: 515 GSCQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLP 336
G A + P P P +Q P P+ V+ S++AP P+ LP
Sbjct: 1464 GMVTNAPAPSSAPAPPA-PVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPAT--APSSTLP 1520
Query: 335 AESTSM--LSTPAPARP-----TTFSFTPASNT 258
+S + +PAP P S PA N+
Sbjct: 1521 PSQSSFAHVPSPAPPAPQHPSAAALSSAPADNS 1553
>SPCC1259.06 |||transcription factor TFIID complex subunit 8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 401 VSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 285
+ S A+S P ++ P PA T M + P RPT+
Sbjct: 117 LGSLAVSQNRPAYVVNHLPPFPASHTYMATPVYPVRPTS 155
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = -1
Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255
P+++ ++ LS + P +L + S+S +ST ++P+T S +P+S ++
Sbjct: 30 PSASVSINYGTLSTVFP-SLYRRASTSSSSSSSSISTSHDSQPSTSSSSPSSTST 83
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 359 ITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLV 249
+TPTP A T+ + A +T S T + TS+V
Sbjct: 34 VTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIV 70
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 389 ALSALAPGALITPTPFLPAESTSMLSTPA 303
+LS + P + +P+P A STS+ S PA
Sbjct: 32 SLSEINPSSFQSPSPSPFASSTSLASKPA 60
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -1
Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*V 240
P +T VSS A + A + P+ + ++ STP+ PT+ S A+ T+
Sbjct: 524 PATTETVSSKAARSATTPAYVGGATKTPSTTKAVESTPS-TLPTSASTNAAATTTTKKPK 582
Query: 239 AERTT 225
A ++T
Sbjct: 583 AAKST 587
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Frame = -1
Query: 518 RGSCQRARCQCTEPGPTC-----QPSAQWKLGPRGEP 423
+G R T P PTC + + W+ P G+P
Sbjct: 618 KGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQP 654
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 292 GRAGAGVDNIDVDSAGKKGVGVINAPG 372
G+A +N V+S GKKG ++N G
Sbjct: 1344 GKAERFSENAGVESIGKKGKNLLNESG 1370
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -1
Query: 362 LITPTPFLPAESTSMLSTPAPAR------PTTFSFTPASNTSLVT*VAERTTRAS 216
LI PTP + S + + P+PA P+ S P+ ++SL + VA + + S
Sbjct: 292 LIAPTPTISPPSANTVGNPSPADTPGFNVPSLISDDPSVSSSLSSSVASLSLQNS 346
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -3
Query: 489 VYRARSHLPAFSAVEAGTTWRARTNINVXGQLARAQRIGARSVDHSDA 346
+ R R HL + A E T WR + Q AR + + D ++
Sbjct: 334 IRRLRGHLREYVAWERNTIWREMMAMERRTQAARLSGLKPVAADEKES 381
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = -1
Query: 416 TSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VA 237
+S+ SS + S+ + + + P + S+S S+ + + ++ S P+S++S +T ++
Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMS 245
Query: 236 ERT 228
T
Sbjct: 246 SST 248
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 24.6 bits (51), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -1
Query: 401 VSSHALSALAPGALI---TPTPFLPAESTSMLSTPAPARPTTFS-FTPASNTSL 252
+S L+A P + +P P P + S+ TP+ + PT S P S+ SL
Sbjct: 584 ISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPASVLAPPSSASL 637
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,954,509
Number of Sequences: 5004
Number of extensions: 34924
Number of successful extensions: 153
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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