BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F05f (521 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 61 9e-11 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.005 SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 29 0.42 SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 29 0.42 SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.42 SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 0.73 SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 0.73 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 0.73 SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.97 SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 1.3 SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 27 1.7 SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 2.2 SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 2.2 SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.2 SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosacch... 27 2.2 SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 27 2.2 SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.2 SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 3.0 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 5.2 SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 25 5.2 SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.2 SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 5.2 SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 6.8 SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 6.8 SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 6.8 SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 6.8 SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 6.8 SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.0 SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 9.0 SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 9.0 >SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 466 Score = 61.3 bits (142), Expect = 9e-11 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%) Frame = +1 Query: 85 DIKSVLIVDGVGAKCAELLNAYGIATT-TKAKISKEELLMEIPNHDALVVRSATQVTKEV 261 DIK +L+++ V L G K +S+++L+ +I A+ +RS T++T+ V Sbjct: 55 DIK-ILLLENVNQSALSNLKDEGYQVEFLKTSMSEDDLVEKIKGVHAIGIRSKTRLTRRV 113 Query: 262 LDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 399 L+A L V+G G + +D+D A ++G+ V N+P AN+ S EL Sbjct: 114 LEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAEL 159 Score = 24.6 bits (51), Expect = 9.0 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 413 MLVLARHVVPASTALKAGRWDRALYTGSELAGKTL 517 ++ LAR V S L G W++ E+ GKTL Sbjct: 164 IISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTL 198 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 35.5 bits (78), Expect = 0.005 Identities = 42/135 (31%), Positives = 57/135 (42%), Gaps = 3/135 (2%) Frame = -1 Query: 470 TCQPSAQWKLGPRGEPEP-TSTXQVSSHALSALA-PGALITP-TPFLPAESTSMLSTPAP 300 T S+ G P P TST +S ++ +L TP TP +P STS S P P Sbjct: 92 TSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 151 Query: 299 ARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLA 120 PT+ S T ++ L T TT S + + SSSL +S + Sbjct: 152 --PTSTSSTDTNSNPLPTTSTSCTTSTS-IPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 208 Query: 119 PTPSTIKTDLMSTTI 75 PT ST TD S+ + Sbjct: 209 PT-STSSTDTNSSPL 222 Score = 33.5 bits (73), Expect = 0.020 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = -1 Query: 461 PSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITP-TPFLPAESTSMLSTPAPARPTT 285 P++ G P P+++ ++ + S G TP TP +P STS STP P P + Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTT-STSIPPTGNSTTPVTPTVPPTSTSSTSTPPP--PAS 375 Query: 284 FSFTPASNTSLVT*VAERTTRAS 216 S T S++ L++ TT S Sbjct: 376 TSSTGTSSSPLLSTSTSCTTSTS 398 Score = 32.3 bits (70), Expect = 0.045 Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 3/132 (2%) Frame = -1 Query: 461 PSAQWKLGPRGEPEPT-STXQVSSHALSALA-PGALITP-TPFLPAESTSMLSTPAPARP 291 P++ P PT ST +S ++ +L TP TP +P STS S P P P Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP--P 209 Query: 290 TTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLAPTP 111 T+ S T +++ L T TT S + SSSL +S + PT Sbjct: 210 TSTSSTDTNSSPLPTTSTSCTTSTSI--PTGGSSSLSTPITPTVPPTSTSSTSIPIPPT- 266 Query: 110 STIKTDLMSTTI 75 ST TD S+ + Sbjct: 267 STSSTDTNSSPL 278 Score = 31.5 bits (68), Expect = 0.079 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 419 PTSTXQVSSHALSALAP-GALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246 P T S +++ P G TP TP +P STS STP P P + S T S++ L + Sbjct: 277 PLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP--PASTSSTGTSSSPLPS 334 Query: 245 *VAERTTRAS 216 TT S Sbjct: 335 TSTSCTTSTS 344 Score = 26.2 bits (55), Expect = 3.0 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = -1 Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*V 240 P +T ++ + S L +T TP T+ S P + P T S S+++ VT Sbjct: 526 PVTTTNCTT-STSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTST 584 Query: 239 AERTTRAS 216 TT + Sbjct: 585 PVTTTNCT 592 Score = 25.4 bits (53), Expect = 5.2 Identities = 14/60 (23%), Positives = 30/60 (50%) Frame = -1 Query: 425 PEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246 P +T ++S +LS++ + T + + ++ + ++ S+TPAS+TS T Sbjct: 699 PSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASSTSTTT 758 Score = 24.6 bits (51), Expect = 9.0 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -1 Query: 359 ITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 216 +T TP T+ S P + P T S S+++ VT TT + Sbjct: 486 VTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCT 533 Score = 24.6 bits (51), Expect = 9.0 Identities = 23/95 (24%), Positives = 36/95 (37%) Frame = -1 Query: 356 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEX 177 T TP + T STP + P T + S + L T +T + + S+S+ Sbjct: 505 TSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCT-TSTSVPY 563 Query: 176 XXXXXXXXXXXLRSSAHLAPTPSTIKTDLMSTTIL 72 + SS + TP T ST++L Sbjct: 564 TSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 598 >SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces pombe|chr 1|||Manual Length = 497 Score = 29.1 bits (62), Expect = 0.42 Identities = 25/84 (29%), Positives = 37/84 (44%) Frame = -1 Query: 512 SCQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPA 333 +C+R R +C E P C K E P S Q+ A+ +++P L + P Sbjct: 38 TCRRRRIKCDETKPFCLNCT--KTNRECEGYPNSAAQM--QAMGSVSPPELSVHSAQQPL 93 Query: 332 ESTSMLSTPAPARPTTFSFTPASN 261 TS+ S+ A TFS + SN Sbjct: 94 IPTSIASSSAQT-GDTFSGSSQSN 116 >SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 340 Score = 29.1 bits (62), Expect = 0.42 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 Query: 277 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAP 369 KL V G AG +N+DVD A + GV V N P Sbjct: 85 KLFVTG--AAGYNNVDVDWATRNGVYVANTP 113 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 29.1 bits (62), Expect = 0.42 Identities = 17/54 (31%), Positives = 34/54 (62%) Frame = -1 Query: 422 EPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 261 +P S+ +SS + SA +P + ++ + + +E +S L + + A P+T S TP+S+ Sbjct: 477 QPQSSTPISSSS-SASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSS 529 >SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosaccharomyces pombe|chr 2|||Manual Length = 658 Score = 28.3 bits (60), Expect = 0.73 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = -1 Query: 425 PEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT 246 P P + + ++SAL+ + + PT + S S PAP P + S +P ++ V Sbjct: 217 PFPRESTEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVK 276 Query: 245 *VAERTTR 222 +R Sbjct: 277 TTTSNASR 284 >SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 857 Score = 28.3 bits (60), Expect = 0.73 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +2 Query: 2 SVAARRSEEAHTSIKLNNDSTTKPRWSWTLSRF*SSTG 115 SVAA R+ A ++ NND T P+ + +S F S G Sbjct: 415 SVAALRARFAKANVSENNDPPTFPKTAAKISSFNSKAG 452 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 28.3 bits (60), Expect = 0.73 Identities = 28/99 (28%), Positives = 41/99 (41%) Frame = -1 Query: 485 TEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTP 306 T P PT PS P P + + + A L P A I P + L Sbjct: 414 TPPVPT-PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472 Query: 305 APARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSS 189 APA P + PA+ + + + ++ RA+ L SIR+S Sbjct: 473 APAPPPAPAPAPAAPVASIAELPQQDGRAN-LMASIRAS 510 >SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosaccharomyces pombe|chr 2|||Manual Length = 948 Score = 27.9 bits (59), Expect = 0.97 Identities = 24/85 (28%), Positives = 40/85 (47%) Frame = -1 Query: 332 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSSSLEXXXXXXXXX 153 ES+S+ +T +P +TF T +S +S+ T + ++ S +S+ SSS Sbjct: 238 ESSSLTNTVSPTE-STFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTS--------S 288 Query: 152 XXXLRSSAHLAPTPSTIKTDLMSTT 78 + S + TPSTI T + T Sbjct: 289 SGSSQDSTTIDSTPSTIATSTLQPT 313 >SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 422 Score = 27.5 bits (58), Expect = 1.3 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -1 Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALS-ALAPGALI-TPTPFLPAESTSMLSTP 306 PGP PSA + G + SHA A P A + + PA +T +S P Sbjct: 251 PGPISVPSAPY--GRASSTIAEVSPMYGSHAAPYASTPSAAVGSSRGSTPASATVPIS-P 307 Query: 305 APARPTTFSFTPA 267 A PTT ++ PA Sbjct: 308 ARGFPTTSAYNPA 320 >SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 334 Score = 27.1 bits (57), Expect = 1.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 338 PAESTSMLSTPAPARPTTFSFTPASNTS 255 P+ ++ +PAP T S +PA+NTS Sbjct: 125 PSSISNSSESPAPINSATASMSPANNTS 152 >SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pombe|chr 2|||Manual Length = 741 Score = 26.6 bits (56), Expect = 2.2 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = -1 Query: 416 TSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSL 252 TST +S+ S AP + P+P + + ++L+ P A P + S+ P S T++ Sbjct: 330 TSTDLPTSNLPSQNAPARPVEPSPSI--QPPNLLNLPT-ASPESTSWLPGSQTNI 381 >SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 334 Score = 26.6 bits (56), Expect = 2.2 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +1 Query: 253 KEVLD-AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGA 375 KE++D +K + GAG + +DV + +G+ V + P A Sbjct: 71 KEIIDNLPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKA 112 >SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccharomyces pombe|chr 2|||Manual Length = 884 Score = 26.6 bits (56), Expect = 2.2 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +1 Query: 184 KEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIN 363 KEE +I + +TQ+ + +K + + A +D+I DS G G +N Sbjct: 660 KEEAQKQISQSLIADQQLSTQIGSVGMGKKQAVKELRKLQAKIDSIIADSMSPMGTGAVN 719 Query: 364 AP 369 +P Sbjct: 720 SP 721 >SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosaccharomyces pombe|chr 2|||Manual Length = 121 Score = 26.6 bits (56), Expect = 2.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 141 QRLRNRHHYQGQDLQGRTSYGDTQPRRSG 227 QR ++G+ +GR +YG T P R G Sbjct: 86 QRENRGSRFRGRGQRGRGNYGHTAPNRRG 114 >SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 697 Score = 26.6 bits (56), Expect = 2.2 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -1 Query: 509 CQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAE 330 C++ + +C+ P+CQ + K+ P + S A L+P I P+L + Sbjct: 27 CRQKKIKCSGEKPSCQACSNNKVECIWPDRPNMRGKKPSSAARTLSPLTGIV-QPYLGSH 85 Query: 329 --STSMLSTPAPARPTTFS 279 S ++LS +P T+S Sbjct: 86 PFSPTILSPSSPNMDFTYS 104 >SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces pombe|chr 1|||Manual Length = 897 Score = 26.6 bits (56), Expect = 2.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -1 Query: 398 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255 S H + P L P+ F+ A+ S L TP P P + S P S Sbjct: 152 SDHPIDLDNPEHLTPPSSFITAKQLSRLPTPLP--PPSSSSLPTGTIS 197 >SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 26.2 bits (55), Expect = 3.0 Identities = 12/47 (25%), Positives = 21/47 (44%) Frame = -1 Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 297 P + T ++ A +A P A P P +P + + ++TP A Sbjct: 339 PSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPVAA 385 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 25.4 bits (53), Expect = 5.2 Identities = 12/47 (25%), Positives = 20/47 (42%) Frame = -1 Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 297 P +PT+ S+HA + P + P P + + PAP+ Sbjct: 1427 PLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPS 1473 Score = 24.6 bits (51), Expect = 9.0 Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 7/93 (7%) Frame = -1 Query: 515 GSCQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLP 336 G A + P P P +Q P P+ V+ S++AP P+ LP Sbjct: 1464 GMVTNAPAPSSAPAPPA-PVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPAT--APSSTLP 1520 Query: 335 AESTSM--LSTPAPARP-----TTFSFTPASNT 258 +S + +PAP P S PA N+ Sbjct: 1521 PSQSSFAHVPSPAPPAPQHPSAAALSSAPADNS 1553 >SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Schizosaccharomyces pombe|chr 3|||Manual Length = 222 Score = 25.4 bits (53), Expect = 5.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -1 Query: 401 VSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 285 + S A+S P ++ P PA T M + P RPT+ Sbjct: 117 LGSLAVSQNRPAYVVNHLPPFPASHTYMATPVYPVRPTS 155 >SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 230 Score = 25.4 bits (53), Expect = 5.2 Identities = 14/55 (25%), Positives = 31/55 (56%) Frame = -1 Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255 P+++ ++ LS + P +L + S+S +ST ++P+T S +P+S ++ Sbjct: 30 PSASVSINYGTLSTVFP-SLYRRASTSSSSSSSSISTSHDSQPSTSSSSPSSTST 83 >SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 25.4 bits (53), Expect = 5.2 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 Query: 359 ITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLV 249 +TPTP A T+ + A +T S T + TS+V Sbjct: 34 VTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIV 70 >SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Manual Length = 462 Score = 25.0 bits (52), Expect = 6.8 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 389 ALSALAPGALITPTPFLPAESTSMLSTPA 303 +LS + P + +P+P A STS+ S PA Sbjct: 32 SLSEINPSSFQSPSPSPFASSTSLASKPA 60 >SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 25.0 bits (52), Expect = 6.8 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = -1 Query: 419 PTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*V 240 P +T VSS A + A + P+ + ++ STP+ PT+ S A+ T+ Sbjct: 524 PATTETVSSKAARSATTPAYVGGATKTPSTTKAVESTPS-TLPTSASTNAAATTTTKKPK 582 Query: 239 AERTT 225 A ++T Sbjct: 583 AAKST 587 >SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 855 Score = 25.0 bits (52), Expect = 6.8 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 5/37 (13%) Frame = -1 Query: 518 RGSCQRARCQCTEPGPTC-----QPSAQWKLGPRGEP 423 +G R T P PTC + + W+ P G+P Sbjct: 618 KGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQP 654 >SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1522 Score = 25.0 bits (52), Expect = 6.8 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 292 GRAGAGVDNIDVDSAGKKGVGVINAPG 372 G+A +N V+S GKKG ++N G Sbjct: 1344 GKAERFSENAGVESIGKKGKNLLNESG 1370 >SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 681 Score = 25.0 bits (52), Expect = 6.8 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Frame = -1 Query: 362 LITPTPFLPAESTSMLSTPAPAR------PTTFSFTPASNTSLVT*VAERTTRAS 216 LI PTP + S + + P+PA P+ S P+ ++SL + VA + + S Sbjct: 292 LIAPTPTISPPSANTVGNPSPADTPGFNVPSLISDDPSVSSSLSSSVASLSLQNS 346 >SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 867 Score = 24.6 bits (51), Expect = 9.0 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = -3 Query: 489 VYRARSHLPAFSAVEAGTTWRARTNINVXGQLARAQRIGARSVDHSDA 346 + R R HL + A E T WR + Q AR + + D ++ Sbjct: 334 IRRLRGHLREYVAWERNTIWREMMAMERRTQAARLSGLKPVAADEKES 381 >SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 374 Score = 24.6 bits (51), Expect = 9.0 Identities = 14/63 (22%), Positives = 34/63 (53%) Frame = -1 Query: 416 TSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VA 237 +S+ SS + S+ + + + P + S+S S+ + + ++ S P+S++S +T ++ Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMS 245 Query: 236 ERT 228 T Sbjct: 246 SST 248 >SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosaccharomyces pombe|chr 1|||Manual Length = 988 Score = 24.6 bits (51), Expect = 9.0 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -1 Query: 401 VSSHALSALAPGALI---TPTPFLPAESTSMLSTPAPARPTTFS-FTPASNTSL 252 +S L+A P + +P P P + S+ TP+ + PT S P S+ SL Sbjct: 584 ISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPASVLAPPSSASL 637 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.316 0.132 0.396 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,954,509 Number of Sequences: 5004 Number of extensions: 34924 Number of successful extensions: 153 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 150 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 212331630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
- SilkBase 1999-2023 -