Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F05f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 81 3e-16
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 74 5e-14
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 71 5e-13
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 40 0.001
At3g28790.1 68416.m03593 expressed protein 39 0.002
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 37 0.007
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 33 0.15
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 31 0.36
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 0.47
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 30 0.82
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 30 0.82
At1g26150.1 68414.m03192 protein kinase family protein similar t... 30 0.82
At3g24550.1 68416.m03083 protein kinase family protein contains ... 30 1.1
At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) simil... 30 1.1
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 29 1.4
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 1.4
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 29 1.4
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 1.9
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 1.9
At1g49870.1 68414.m05591 expressed protein ; expression supporte... 29 1.9
At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box fami... 29 1.9
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.9
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 2.5
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 28 3.3
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 28 3.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 28 3.3
At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase f... 27 5.8
At4g37890.2 68417.m05359 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At4g37890.1 68417.m05358 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 27 5.8
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 27 5.8
At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 7.7
At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels ... 27 7.7
At3g62300.1 68416.m06999 agenet domain-containing protein contai... 27 7.7
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 27 7.7
At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family... 27 7.7
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 81.4 bits (192), Expect = 3e-16
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +1
Query: 97 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGV 276
+L+ + +G LL +G + +S E+L ++ DAL+VRS T+VT+EV +A
Sbjct: 85 ILVTEKLGEAGVNLLREFGDVDCSY-DLSPEDLKKKVAESDALIVRSGTKVTREVFEAAK 143
Query: 277 -KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACE 396
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E
Sbjct: 144 GRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAE 184
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 410 LMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLA 520
L+ +AR+V A ++KAG+W+R+ Y G L GKTLA
Sbjct: 189 LLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLA 225
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 74.1 bits (174), Expect = 5e-14
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +1
Query: 94 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAG 273
++L+ + +G +LL Y + +S EEL +I DAL+VRS T+V ++V ++
Sbjct: 48 TILVTEKLGQAGIDLLKKYANVDCSY-DLSLEELCTKISLCDALIVRSGTKVGRDVFESS 106
Query: 274 V-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACE 396
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E
Sbjct: 107 RGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAE 148
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 410 LMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLA 520
L+ +AR++ A ++KAG+W R Y G L GKTLA
Sbjct: 153 LLTAMARNIAQADASIKAGKWTRNKYVGVSLVGKTLA 189
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 70.9 bits (166), Expect = 5e-13
Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +1
Query: 178 ISKEELLMEIPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVG 354
++ EEL ++I DAL+VRS T+V +EV ++ +LKVVGRAG G+DN+D+ +A + G
Sbjct: 90 MTPEELNIKISLCDALIVRSGTKVGREVFESSHGRLKVVGRAGVGIDNVDLSAATEFGCL 149
Query: 355 VINAPGANALSACE 396
V+NAP AN ++A E
Sbjct: 150 VVNAPTANTIAAAE 163
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 410 LMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLA 520
LM +AR+V A ++KAG W R Y G L GKTLA
Sbjct: 168 LMAAMARNVAQADASVKAGEWKRNKYVGVSLVGKTLA 204
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 202 EIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPG--- 372
E+ + + V Q+ V+ +K++ + G G+D +D+D+A K G+ V P
Sbjct: 90 EVIKNYHICVAMTMQMDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGIKVARIPSEGT 149
Query: 373 ANALSACELTXHVDVG 420
NA S E+ ++ +G
Sbjct: 150 GNAASCSEMAIYLMLG 165
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = -1
Query: 515 GSCQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLP 336
GS + TE G SA+ K G +T + ++ + S +P TPTP P
Sbjct: 229 GSIETNTGSKTEAGSKSSSSAKTKEVSGGSSG--NTYKDTTGSSSGASPSGSPTPTPSTP 286
Query: 335 AESTSMLSTPAPARPTTFSFTPAS 264
ST STP P+ PT + TP++
Sbjct: 287 TPSTPTPSTPTPSTPTPSTPTPST 310
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 300
P PT PS P P PT T V S P TPTP +P+ + + + P P
Sbjct: 118 PPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPP--TPTPSVPSPTPPVPTDPMP 175
Query: 299 ARPTTFSFTPASNTSLV 249
+ P S P + T V
Sbjct: 176 SPPPPVSPPPPTPTPSV 192
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 300
P PT PS P P PT T V S P TPTP +P+ + + P
Sbjct: 100 PPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPP--TPTPSVPSPTPPVSPPPPT 157
Query: 299 ARPTTFSFTP 270
P+ S TP
Sbjct: 158 PTPSVPSPTP 167
Score = 30.3 bits (65), Expect = 0.82
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 300
P PT PS P P PT T V S P TPTP +P+ + + P
Sbjct: 84 PPPT--PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPP--TPTPSVPSPTPPVSPPPPT 139
Query: 299 ARPTTFSFTP 270
P+ S TP
Sbjct: 140 PTPSVPSPTP 149
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 283 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTXHVDVGS 423
K G +N+DV++A K G+ V N PG + EL + + +
Sbjct: 88 KAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAA 134
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/75 (28%), Positives = 24/75 (32%)
Frame = -1
Query: 494 CQCTEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSML 315
C C P QP Q P +P P + Q S P TP P L
Sbjct: 38 CICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPL 97
Query: 314 STPAPARPTTFSFTP 270
S P P + TP
Sbjct: 98 SPPQTTPPPPPAITP 112
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 300
P P S ++GP P P ++ +A P A P P P S++ L P P
Sbjct: 662 PPPPTSHSGSIRVGPPSTPPPPPPPPPKANISNAPKPPA---PPPLPP--SSTRLGAPPP 716
Query: 299 ARPTTFSFTPA 267
P S TPA
Sbjct: 717 PPPPPLSKTPA 727
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 30.3 bits (65), Expect = 0.82
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 271 GVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTXH-VDVGSGSPRGPSF 447
G K+K G G GV + D S KKG G G L EL H G G +G
Sbjct: 260 GNKVKSHG-GGGGVQHYD--SGPKKGGGGTKGGGHGGLDIDELMKHSKGGGGGGNKGNHN 316
Query: 448 HCAEGWQVGP 477
H A+G GP
Sbjct: 317 HSAKGIGGGP 326
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 30.3 bits (65), Expect = 0.82
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 271 GVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTXH-VDVGSGSPRGPSF 447
G K+K G G GV + D S KKG G G L EL H G G +G
Sbjct: 359 GNKVKSHG-GGGGVQHYD--SGPKKGGGGTKGGGHGGLDIDELMKHSKGGGGGGNKGNHN 415
Query: 448 HCAEGWQVGP 477
H A+G GP
Sbjct: 416 HSAKGIGGGP 425
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 30.3 bits (65), Expect = 0.82
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -1
Query: 461 PSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTF 282
PS + P +P P SS + L P ++++P P P +S S P+P PT
Sbjct: 258 PSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSP-PSPPRKSVSGPDNPSPNNPTPV 316
Query: 281 SFTPASN 261
+ +S+
Sbjct: 317 TDNSSSS 323
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = -1
Query: 485 TEPGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTP 306
+ P PT PS+ P + + PG+L TP LP S S TP
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSL---TPPLPQPSPSAPITP 88
Query: 305 APARPTT 285
+P PTT
Sbjct: 89 SPPSPTT 95
>At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) similar
to glutamate decarboxylase (gad) GI:294111 from [Petunia
hybrida]
Length = 494
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 73 KMVVDIKSVLI-VDGVGAKCAELLNAYGIATTTKAKISKEELLMEI 207
++V DI VL +D + +K ++ + GIA K K ++E+LME+
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMGIEGIAENVKEKKMEKEILMEV 476
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 520 GEGLASELAASVQSPVPPASLQRSGSWD 437
G AS AA+ + P PP S RS WD
Sbjct: 252 GSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.5 bits (63), Expect = 1.4
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Frame = -1
Query: 491 QCTEPGPTCQPSAQWKLGPRGEPEPTST------XQVSSHALSALAPGALITPTPFL--P 336
Q + P P QPS+ K P +P+P S + +S S P + P P P
Sbjct: 448 QNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPP 507
Query: 335 AESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGIS 201
A S S + P F P NTS V++ T + L +S
Sbjct: 508 AASKSFPISQPPTTSKPFVSQP-PNTSKPMPVSQPPTTSKPLPVS 551
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 96 GFDRRRGWRQVCRTPQR-LRNRHHYQGQDLQGRTSYGDTQPRRSGCAFSNSS 248
G R+ RQ +R L N+HH + QD+Q + Y Q G + S SS
Sbjct: 1165 GAGRKSRQRQPDLMKKRMLLNKHHNRNQDVQQQNIYSPLQKTSKGPSLSKSS 1216
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -1
Query: 446 KLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 288
+ P +P P +V S + + + PTP +P+ S S P+P+ P+
Sbjct: 29 RCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPS 81
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 PDARRRRTPASSLTTIALPNQDGRGH*VGFDRRRGWRQVCRTPQRL-RNRHHYQGQDLQG 188
PD RRRR+P+SS + + H R R ++ R+P RL + Q L
Sbjct: 603 PDRRRRRSPSSSRSP-SRSRSPPVLHRSPSPRGRKHQRERRSPGRLSEEQDRVQNSKLLK 661
Query: 189 RTSYGDTQPRR 221
RTS DT R+
Sbjct: 662 RTSVPDTDKRK 672
>At1g49870.1 68414.m05591 expressed protein ; expression supported
by MPSS
Length = 828
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 79 VVDIKSVLI---VDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQV 249
+ D++S+L+ V G+ + E + G K +++ L E+P+ D+ +V+ +++
Sbjct: 480 IPDLESLLVKKHVSGLEKEVQETIKNCGKMYENVKKPGRKDGLSEVPSLDSCLVKHFSKL 539
Query: 250 TKEVLDAGVKLK 285
KEV +A + K
Sbjct: 540 EKEVQEAKKRSK 551
>At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box family
protein (FBX1) E3 ubiquitin ligase SCF complex F-box
subunit; almost identical to unusual floral organs
(UFO)GI:4376159 from [Arabidopsis thaliana]
Landsberg-erecta; one amino acid difference
Length = 442
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 332 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWL 210
+ST ++ P+ P +++FT +SN+S T ++ W+
Sbjct: 2 DSTVFINNPSLTLPFSYTFTSSSNSSTTTSTTTDSSSGQWM 42
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 374 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255
A G L+ L + + L PAP +PT + P NTS
Sbjct: 207 AKGILVNSFVDLESNAIKALQEPAPDKPTVYPIGPLVNTS 246
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Frame = -1
Query: 485 TEPGPT-CQPSAQWKLGPRGEP-----EPTSTXQVSSHALSALAPGALITPTPFLPAEST 324
T P P PS+ P G P P+ V S + +PG+ P+P P S+
Sbjct: 499 TTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGS--PPSPSSPTPSS 556
Query: 323 SMLSTPAPARPTTFSFTPASNT 258
+ S P P+ P T +P N+
Sbjct: 557 PIPSPPTPSTPPT-PISPGQNS 577
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 356 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 255
TP+ F + S + S+P+P +TF+ + SNTS
Sbjct: 289 TPSLFASSSSGATTSSPSPFGVSTFNSSSTSNTS 322
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 220 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAP 369
A+V ++ +++ L++V G+D ID+ +KG+ V N P
Sbjct: 48 AVVGNASAGADAQLISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTP 97
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHAL---SALAPGALITPTPFLPAESTSMLST 309
PGP P A P + + SSHAL S A G L +P+ +P+ S+
Sbjct: 165 PGPATSPPAPSAPATSPPAPPNAPPRNSSHALPPKSTAAGGPLTSPSRGVPSSGNSV--- 221
Query: 308 PAPA 297
P PA
Sbjct: 222 PPPA 225
>At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 16 (UBP16)
[Arabidopsis thaliana] GI:11993477; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 731
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 108 RRGWRQVCRTPQRLRNRHHYQGQDLQGRTSYGDTQPRRSGCAFSNSSD 251
RRG ++ CR+P + Y D + S D R G A+ +SS+
Sbjct: 87 RRGHKEECRSPDYDEEKEEYVQSDYDAKESNVDFPSR--GTAYESSSN 132
>At4g37890.2 68417.m05359 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 711
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -1
Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 288
PR E P S + + + A+ TP+P LPA T PT
Sbjct: 46 PRSETRPDSVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTSGDVTPT 95
>At4g37890.1 68417.m05358 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 739
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -1
Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 288
PR E P S + + + A+ TP+P LPA T PT
Sbjct: 46 PRSETRPDSVTCSPTIPCQSWSATAISTPSPSLPASPKLQCDTSGDVTPT 95
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 425 PEPTSTXQVSSHALSALAPGALITPTPFLPAE---STSMLSTPAPARPTTFSFTPASNTS 255
P P SS A P + P PF P+ ST+ PAP P + PA+ +S
Sbjct: 73 PPPHEKHLFSSVANPPPPPPSPPHPNPFFPSSDPTSTASHPPPAPPPPASLPTFPANISS 132
Query: 254 LV 249
L+
Sbjct: 133 LL 134
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 434 RGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 264
RG P +S S P I+PTP P+ S TP R +T S T AS
Sbjct: 167 RGRPSSARHPSPASGRRSG-TPVRRISPTPGKPSGPVSRSPTPTSRRMSTGSTTMAS 222
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = -1
Query: 479 PGPTCQPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 300
P + P A P +P P+ + S PG +P P+ T +T P
Sbjct: 119 PDASPSPPAPTTTNPPPKPSPSPPGETPS------PPGETPSPPKPSPSTPTPTTTTSPP 172
Query: 299 ARPTTFSFTPASN 261
P T + P+SN
Sbjct: 173 PPPATSASPPSSN 185
>At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels
between the genome sequence and the cDNA prevent
identical translations from being annotated; the basis
for this is under investigation.
Length = 87
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 389 ALSALAPGALITPTPFLP-AESTSMLSTPAPARPTTFSFTPASN 261
A S LA P FLP ES S + TP A P FTP S+
Sbjct: 16 AASCLAQAPAPAPITFLPPVESPSPVVTPT-AEPPARCFTPYSS 58
>At3g62300.1 68416.m06999 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 722
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -1
Query: 464 QPSAQWKLGPRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 285
+PS +WK G E S + SSHA+ A I T + L T R T
Sbjct: 277 RPSIEWKDGIWHRKEKVSGSEESSHAVEETAASTRIRITVRTALKEKKALGTGINVRTTR 336
Query: 284 FS 279
S
Sbjct: 337 SS 338
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 425 PEPTSTXQVSSHALSALAPGALITP--TPFLPAESTSMLSTPAPARPTTFSFTPASNTSL 252
P P S + S+ P + P +PF P +S P P P +F+ PA+ +SL
Sbjct: 38 PSPPSPPPLPKLPFSSTTPPSSSDPNASPFFPLYPSS----PPPPSPASFASFPANISSL 93
Query: 251 V 249
+
Sbjct: 94 I 94
>At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family
protein
Length = 76
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 437 PRGEPEPTSTXQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 261
P EPEP T + P + TPTP +P + + + PAPA T + T +N
Sbjct: 26 PESEPEPAPTSK----------PKSTSTPTP-IPEPAPTPIPEPAPAPCCTTTTTTTTN 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,786,475
Number of Sequences: 28952
Number of extensions: 207730
Number of successful extensions: 911
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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