Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.076
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.076
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
 Frame = +3

Query: 267  RFISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGNDPQ----LPWTLTVHFTKFPEDI 434
            RFI       E W +F+G  L W YP  +  D   G D        W   +     P+  
Sbjct: 1498 RFIKHVLQFLEKW-NFDGLDLDWEYPKCWQVDCKKGPDSDKQAFAAWVTELKQAFKPKGY 1556

Query: 435  LLHC---PNKDVVEAHY 476
            LL     P+K V++A Y
Sbjct: 1557 LLSAAVSPSKTVIDAGY 1573



 Score = 23.4 bits (48), Expect = 1.2
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 225  YFPLVIDKMKRHFLRFISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGND 380
            Y  LV D   R    FI+   +  E W +F+G  L W YP  +  D   G D
Sbjct: 2409 YSRLVNDPQAR--AAFIAHVLAFIEEW-NFDGLDLDWEYPKCWQVDCNKGPD 2457



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 309 DFNGQPLKWHYPI 347
           +F G  L W+YP+
Sbjct: 748 NFKGLHLDWNYPV 760


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 312 FNGQPLKWHYPIG 350
           FNG  + W YP G
Sbjct: 632 FNGLDVDWEYPRG 644


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 349 DFCTICIVVMILNYPG 396
           D C +  V+ +L YPG
Sbjct: 39  DECQVTPVIHVLQYPG 54


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 312 FNGQPLKWHYP 344
           FNG  + W YP
Sbjct: 138 FNGLDIDWEYP 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,430
Number of Sequences: 336
Number of extensions: 3209
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)