BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F04f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY069596-1|AAL39741.1| 269|Drosophila melanogaster LD34980p pro... 189 2e-48 AE014298-1029|AAF46252.2| 269|Drosophila melanogaster CG1643-PA... 189 2e-48 AY119524-1|AAM50178.1| 454|Drosophila melanogaster GH15335p pro... 29 2.9 AY058780-1|AAL14009.1| 727|Drosophila melanogaster SD07158p pro... 29 5.1 AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P... 29 5.1 BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p pro... 28 6.7 AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domai... 28 6.7 >AY069596-1|AAL39741.1| 269|Drosophila melanogaster LD34980p protein. Length = 269 Score = 189 bits (460), Expect = 2e-48 Identities = 81/142 (57%), Positives = 111/142 (78%) Frame = +3 Query: 93 MANDREVLREIWDGKLPICFHLAQEEIMEIQQPDPFYVMVPRLSYFPLVIDKMKRHFLRF 272 MA+DREVLR IW+G++ ICF ++EI+ I+ P+PFY+M+ RLSY PLV DK++++F R+ Sbjct: 1 MAHDREVLRMIWEGQIGICFQADRDEIVGIK-PEPFYLMISRLSYLPLVTDKVRKYFSRY 59 Query: 273 ISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGNDPQLPWTLTVHFTKFPEDILLHCPN 452 IS E+ D +W DFNG PL+ HYPIG LYDL + PW LT+HF+KFPED+L+ + Sbjct: 60 ISAEHQDGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCLTIHFSKFPEDMLVKLNS 119 Query: 453 KDVVEAHYMSTVKEADVLKHRG 518 K+++E+HYMS +KEADVLKHRG Sbjct: 120 KELLESHYMSCLKEADVLKHRG 141 >AE014298-1029|AAF46252.2| 269|Drosophila melanogaster CG1643-PA protein. Length = 269 Score = 189 bits (460), Expect = 2e-48 Identities = 81/142 (57%), Positives = 111/142 (78%) Frame = +3 Query: 93 MANDREVLREIWDGKLPICFHLAQEEIMEIQQPDPFYVMVPRLSYFPLVIDKMKRHFLRF 272 MA+DREVLR IW+G++ ICF ++EI+ I+ P+PFY+M+ RLSY PLV DK++++F R+ Sbjct: 1 MAHDREVLRMIWEGQIGICFQADRDEIVGIK-PEPFYLMISRLSYLPLVTDKVRKYFSRY 59 Query: 273 ISQENSDSEMWLDFNGQPLKWHYPIGFLYDLYCGNDPQLPWTLTVHFTKFPEDILLHCPN 452 IS E+ D +W DFNG PL+ HYPIG LYDL + PW LT+HF+KFPED+L+ + Sbjct: 60 ISAEHQDGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCLTIHFSKFPEDMLVKLNS 119 Query: 453 KDVVEAHYMSTVKEADVLKHRG 518 K+++E+HYMS +KEADVLKHRG Sbjct: 120 KELLESHYMSCLKEADVLKHRG 141 >AY119524-1|AAM50178.1| 454|Drosophila melanogaster GH15335p protein. Length = 454 Score = 29.5 bits (63), Expect = 2.9 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 142 GSFPSHISRSTSLSLAILIVINMLITEHYYFLMLI 38 GS+P RS SL + + + N+ + +H+Y L +I Sbjct: 408 GSWPLDFRRSQSLPVIVSLHCNISLVQHFYALFII 442 >AY058780-1|AAL14009.1| 727|Drosophila melanogaster SD07158p protein. Length = 727 Score = 28.7 bits (61), Expect = 5.1 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +3 Query: 189 PDPFYVMVPRLSYFPLVIDKMKRHFLRFISQE 284 P P+YV+V L+ PLV+ + R + ++ E Sbjct: 696 PFPYYVIVRDLNQLPLVLSEAMRQWFELVNSE 727 >AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA protein. Length = 5303 Score = 28.7 bits (61), Expect = 5.1 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +3 Query: 189 PDPFYVMVPRLSYFPLVIDKMKRHFLRFISQE 284 P P+YV+V L+ PLV+ + R + ++ E Sbjct: 5272 PFPYYVIVRDLNQLPLVLSEAMRQWFELVNSE 5303 >BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p protein. Length = 429 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/55 (21%), Positives = 22/55 (40%) Frame = +3 Query: 348 GFLYDLYCGNDPQLPWTLTVHFTKFPEDILLHCPNKDVVEAHYMSTVKEADVLKH 512 GF++ Y +LPW L V + + + H N+ + H + + H Sbjct: 197 GFIFIWYHAEQTELPWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAH 251 >AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domain protein Neverland protein. Length = 429 Score = 28.3 bits (60), Expect = 6.7 Identities = 12/55 (21%), Positives = 22/55 (40%) Frame = +3 Query: 348 GFLYDLYCGNDPQLPWTLTVHFTKFPEDILLHCPNKDVVEAHYMSTVKEADVLKH 512 GF++ Y +LPW L V + + + H N+ + H + + H Sbjct: 197 GFIFIWYHAEQTELPWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAH 251 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,654,740 Number of Sequences: 53049 Number of extensions: 509337 Number of successful extensions: 1080 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1078 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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