BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F03f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1646 - 35027475-35027600,35027713-35027826,35027920-350281... 53 2e-07 04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 29 1.7 03_05_0013 - 19718178-19718930,19718997-19719205,19719245-197193... 29 2.3 04_01_0260 - 3506672-3508981 28 4.0 01_06_0295 + 28276505-28276576,28276682-28276888,28277492-282777... 27 6.9 12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 27 9.1 03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 27 9.1 >04_04_1646 - 35027475-35027600,35027713-35027826,35027920-35028106, 35028262-35028379,35028699-35028827,35028947-35028998, 35029525-35029869 Length = 356 Score = 52.8 bits (121), Expect = 2e-07 Identities = 24/66 (36%), Positives = 35/66 (53%) Frame = +3 Query: 324 AQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXXXXX 503 AQ + + ++ LP + +VRLP PTT PR K +P PKP TKW++F Sbjct: 80 AQAVADALFALPATEDRDGPMVRLPPPTTRFPREKHLPRPKPPTKWEQFAKMKGITKHKK 139 Query: 504 DXLQWD 521 + +WD Sbjct: 140 NKREWD 145 >04_04_1400 - 33259716-33260069,33260172-33260219,33260471-33260596, 33260850-33260900,33260963-33261055,33261217-33261272, 33261465-33261522,33262306-33262365,33262513-33262623, 33263368-33263949,33264026-33264097 Length = 536 Score = 29.5 bits (63), Expect = 1.7 Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Frame = +3 Query: 132 MDIVNEILEREQKKADKYKPITVEK-HLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLA 308 M+ + + + E A+ K + E+ +L+L+ D +A ++D+KTL +K +A Sbjct: 245 MEALARLAKLEVTNAELAKSLAREQWNLDLQVDQ---VAQLREEVDMKTLTQDKYKRKIA 301 Query: 309 LTRDNAQLLLNKVWELPTERIEEAIV 386 + + LL+N++ L ++EE ++ Sbjct: 302 KMQKTSPLLVNEIESLRRFKLEEEMI 327 >03_05_0013 - 19718178-19718930,19718997-19719205,19719245-19719325, 19719581-19720613 Length = 691 Score = 29.1 bits (62), Expect = 2.3 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +3 Query: 327 QLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQE 467 Q L K +PT R + I+V+L L ++KP PKP W+E Sbjct: 628 QNFLEKETTMPTNRYWK-ILVKLSTLAKKLEQSKPSSTPKPKKVWKE 673 >04_01_0260 - 3506672-3508981 Length = 769 Score = 28.3 bits (60), Expect = 4.0 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Frame = +3 Query: 303 LALTRDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAK-------PVPVPKPLTKW 461 + ++RD L ++VW+ E I V P P P A P P PKP+T + Sbjct: 431 IQISRDFRNKLFDRVWKNMELAFPERIPVEYPLPPHPYPMAPMEFDLSLPAPPPKPITGF 490 Query: 462 QE 467 + Sbjct: 491 DQ 492 >01_06_0295 + 28276505-28276576,28276682-28276888,28277492-28277740, 28277928-28278080,28278158-28278313,28278411-28278570, 28278664-28278815,28278906-28278993,28279111-28279223, 28279271-28279345,28279435-28279669,28279760-28280148 Length = 682 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 138 IVNEILEREQKKADKYKPITVEKHLELE 221 + +E+L EQ KA K K + ++K ELE Sbjct: 280 VESEVLRLEQLKASKMKDLVLKKKAELE 307 >12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162, 27556683-27557062,27557202-27557311,27557864-27558033, 27558236-27558444,27558528-27558617,27559125-27559264, 27559356-27559463,27559626-27559716,27560736-27560852, 27561497-27561767,27561892-27562193,27562400-27562469, 27563464-27563702,27564613-27564846,27564943-27565179, 27565276-27565734 Length = 1249 Score = 27.1 bits (57), Expect = 9.1 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 117 SVLITMDIVNEILEREQKKADKYKPITVEKHLELEFDL 230 S LI + ++ER+QKKA K + E HL L+ DL Sbjct: 198 SALIYQEKRTIVMERKQKKAQKEE---AENHLRLQQDL 232 >03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669, 7298723-7298835,7298924-7299034,7299480-7299597, 7299706-7299809,7300570-7300665,7301806-7302307 Length = 654 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/35 (28%), Positives = 16/35 (45%) Frame = +3 Query: 357 PTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKW 461 P++ ++ V P +P PVP+P T W Sbjct: 491 PSDGMQPLFVAPAPVAAAAMPFPSPVPLPNSTTAW 525 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,269,916 Number of Sequences: 37544 Number of extensions: 250668 Number of successful extensions: 791 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 789 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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