Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS308F03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein. 135 8e-32
BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesi... 135 8e-32
BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesi... 135 8e-32
BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligas... 31 3.2
BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligas... 31 3.2
AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alp... 31 3.2
AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein. 31 3.2
BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein pr... 29 7.5
BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr... 29 7.5
BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein pr... 29 7.5
BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein pr... 29 7.5
BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5
AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5
AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein pr... 29 7.5
AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein. 29 7.5
>D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein.
Length = 399
Score = 135 bits (327), Expect = 8e-32
Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +3
Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 40 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 99
Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F
Sbjct: 100 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 159
Query: 495 XXXDXLQWD 521
L WD
Sbjct: 160 KKKTNLVWD 168
>BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 135 bits (327), Expect = 8e-32
Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +3
Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65
Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F
Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125
Query: 495 XXXDXLQWD 521
L WD
Sbjct: 126 KKKTNLVWD 134
>BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesis
regulator homolog (S. cerevisiae) protein.
Length = 365
Score = 135 bits (327), Expect = 8e-32
Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +3
Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314
V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL
Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65
Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494
RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F
Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125
Query: 495 XXXDXLQWD 521
L WD
Sbjct: 126 KKKTNLVWD 134
>BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -3
Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -3
Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alpha-I
protein.
Length = 1749
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -3
Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389
>AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein.
Length = 1709
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -3
Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205
E L+ + H ++ M ++ CP L Q+ +V L +++PN+
Sbjct: 1322 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1372
>BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein
protein.
Length = 1359
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 249 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQRDVLLQKFNEKD--LEVIQ 306
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 307 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 345
>BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein
protein.
Length = 1763
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein
protein.
Length = 1605
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein
protein.
Length = 1204
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1814
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein
protein.
Length = 1893
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544
>AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein.
Length = 1852
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317
NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + +
Sbjct: 486 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 543
Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428
N L+ + EL +E + E+ + P TI + K
Sbjct: 544 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 582
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,437,678
Number of Sequences: 237096
Number of extensions: 1504315
Number of successful extensions: 3689
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3684
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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