BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308F03f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein. 135 8e-32 BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesi... 135 8e-32 BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesi... 135 8e-32 BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligas... 31 3.2 BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligas... 31 3.2 AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alp... 31 3.2 AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein. 31 3.2 BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein pr... 29 7.5 BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr... 29 7.5 BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein pr... 29 7.5 BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein pr... 29 7.5 BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit... 29 7.5 AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit... 29 7.5 AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein pr... 29 7.5 AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein. 29 7.5 >D25218-1|BAA04948.1| 399|Homo sapiens KIAA0112 protein. Length = 399 Score = 135 bits (327), Expect = 8e-32 Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%) Frame = +3 Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314 V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL Sbjct: 40 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 99 Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494 RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F Sbjct: 100 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 159 Query: 495 XXXDXLQWD 521 L WD Sbjct: 160 KKKTNLVWD 168 >BC013043-1|AAH13043.1| 365|Homo sapiens RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) protein. Length = 365 Score = 135 bits (327), Expect = 8e-32 Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%) Frame = +3 Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314 V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65 Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494 RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125 Query: 495 XXXDXLQWD 521 L WD Sbjct: 126 KKKTNLVWD 134 >BC001811-1|AAH01811.1| 365|Homo sapiens RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) protein. Length = 365 Score = 135 bits (327), Expect = 8e-32 Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 2/129 (1%) Frame = +3 Query: 141 VNEILER-EQKKADKYKPITVEKHLELEFDLGSLLASDTND-LDIKTLKTNKDSYLLALT 314 V E+L + EQ +A+K + ITV K LEL+FDLG+LLASD N ++ ++ L AL Sbjct: 6 VEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALA 65 Query: 315 RDNAQLLLNKVWELPTERIEEAIVVRLPQPTTILPRAKPVPVPKPLTKWQEFXXXXXXXX 494 RDN QLL+N++W+LPTER+EEAIV RLP+PTT LPR KP+P P+PLT+WQ+F Sbjct: 66 RDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRP 125 Query: 495 XXXDXLQWD 521 L WD Sbjct: 126 KKKTNLVWD 134 >BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligase E3 component n-recognin 1 protein. Length = 1749 Score = 30.7 bits (66), Expect = 3.2 Identities = 12/51 (23%), Positives = 24/51 (47%) Frame = -3 Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205 E L+ + H ++ M ++ CP L Q+ +V L +++PN+ Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389 >BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligase E3 component n-recognin 1 protein. Length = 1749 Score = 30.7 bits (66), Expect = 3.2 Identities = 12/51 (23%), Positives = 24/51 (47%) Frame = -3 Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205 E L+ + H ++ M ++ CP L Q+ +V L +++PN+ Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389 >AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alpha-I protein. Length = 1749 Score = 30.7 bits (66), Expect = 3.2 Identities = 12/51 (23%), Positives = 24/51 (47%) Frame = -3 Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205 E L+ + H ++ M ++ CP L Q+ +V L +++PN+ Sbjct: 1339 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1389 >AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein. Length = 1709 Score = 30.7 bits (66), Expect = 3.2 Identities = 12/51 (23%), Positives = 24/51 (47%) Frame = -3 Query: 357 EAPILYSVVAEHCHGSMQVNMNLCLSSAFLCPNRLCQRPIVNLGRILIPNV 205 E L+ + H ++ M ++ CP L Q+ +V L +++PN+ Sbjct: 1322 EGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNI 1372 >BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein protein. Length = 1359 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 249 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQRDVLLQKFNEKD--LEVIQ 306 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 307 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 345 >BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein protein. Length = 1763 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein protein. Length = 1605 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein protein. Length = 1204 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 1814 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 862 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 1893 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 862 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 1893 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 862 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 1893 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 862 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit associated protein 2 protein. Length = 1893 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein protein. Length = 1893 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 448 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 505 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 506 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 544 >AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein. Length = 1852 Score = 29.5 bits (63), Expect = 7.5 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 144 NEILEREQKKADKYKPITVE--KHLELEFDLGSLLASDTNDLDIKTLKTNKDSYLLALTR 317 NE+ ERE+ ++YK + E K L + + L TN D+ K N+ L + + Sbjct: 486 NEVNEREKAMENRYKSLLSESNKKLHNQEQVIKHLTESTNQKDVLLQKFNEKD--LEVIQ 543 Query: 318 DNAQLLLNKVWELPTERI--EEAIVVRLPQPTTILPRAK 428 N L+ + EL +E + E+ + P TI + K Sbjct: 544 QNCYLMAAEDLELRSEGLITEKCSSQQPPGSKTIFSKEK 582 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 69,437,678 Number of Sequences: 237096 Number of extensions: 1504315 Number of successful extensions: 3689 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3684 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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