Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7E385 Cluster: LOC532997 protein; n=2; Euteleostomi|Re...    69   9e-11
UniRef50_O60341 Cluster: Lysine-specific histone demethylase 1; ...    69   9e-11
UniRef50_Q9VW97 Cluster: Possible lysine-specific histone demeth...    60   2e-08
UniRef50_Q9XWP6 Cluster: Probable lysine-specific histone demeth...    35   0.98 
UniRef50_Q4P6K9 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_Q22343 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_Q06640 Cluster: F-box protein YDR306C; n=4; Saccharomyc...    32   6.9  

>UniRef50_A7E385 Cluster: LOC532997 protein; n=2; Euteleostomi|Rep:
           LOC532997 protein - Bos taurus (Bovine)
          Length = 363

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = +3

Query: 327 NSLEGAAFQSRLPFDKMSSLEAECFSD-LQGPSNC--AFIQIRNRILKMWFADPKKQLTQ 497
           + +EGAAFQSRLP D+M+S EA CF D + GP      F+ IRNR L++W  +PK QLT 
Sbjct: 173 SGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTF 232

Query: 498 EQAVKKME 521
           E  ++++E
Sbjct: 233 EATLQQLE 240


>UniRef50_O60341 Cluster: Lysine-specific histone demethylase 1;
           n=47; Eumetazoa|Rep: Lysine-specific histone demethylase
           1 - Homo sapiens (Human)
          Length = 852

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = +3

Query: 327 NSLEGAAFQSRLPFDKMSSLEAECFSD-LQGPSNC--AFIQIRNRILKMWFADPKKQLTQ 497
           + +EGAAFQSRLP D+M+S EA CF D + GP      F+ IRNR L++W  +PK QLT 
Sbjct: 172 SGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTF 231

Query: 498 EQAVKKME 521
           E  ++++E
Sbjct: 232 EATLQQLE 239


>UniRef50_Q9VW97 Cluster: Possible lysine-specific histone
           demethylase 1; n=3; Sophophora|Rep: Possible
           lysine-specific histone demethylase 1 - Drosophila
           melanogaster (Fruit fly)
          Length = 890

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = +3

Query: 321 MLNSLEGAAFQSRLPFDKMSSLEAECFSDLQGP---SNCAFIQIRNRILKMWFADPKKQL 491
           +L+  EGA FQSRLPF+KM+  E  CF D+       +  F+ IRN +L MW  +PK QL
Sbjct: 156 VLSGQEGAVFQSRLPFNKMTPNEEACFPDISRSGILGHRVFLNIRNSLLHMWVDNPKIQL 215

Query: 492 TQEQAVKKM 518
           + E A+K +
Sbjct: 216 SFEIALKNL 224


>UniRef50_Q9XWP6 Cluster: Probable lysine-specific histone
           demethylase 1; n=2; Caenorhabditis|Rep: Probable
           lysine-specific histone demethylase 1 - Caenorhabditis
           elegans
          Length = 770

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +3

Query: 327 NSLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNC--AFIQIRNRILKMWFADPKKQLT 494
           N+L  AA  +RLPFD+ +  E   F +L         F+ +RN  L  W  +P K+ T
Sbjct: 26  NALAAAASAARLPFDRPTDHELAFFPELWEHKTAVEVFLLLRNSTLATWQYNPLKECT 83


>UniRef50_Q4P6K9 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1378

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 298 LKKLTIKKCLIVLKEQHFSRDYHLIRCRHLKQNAFLIYKALRIAHL 435
           +KK  +K   +  K+QH  R    +R RHL+  AF +++ LR +H+
Sbjct: 509 VKKRLLKDTFLAWKQQHMQRCADTVRKRHLQSGAFALWQ-LRSSHI 553


>UniRef50_Q22343 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 737

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 330 SLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCA--FIQIRNRILKMWFADPKKQLTQEQ 503
           SL   A +  +  D+ + +EA  F ++Q   + +  F+ IRN  L +W A    + T E 
Sbjct: 69  SLAEVARRHGISADRPTEIEAAFFPEVQMSRSFSDVFLMIRNTTLSIWLASATTECTAED 128

Query: 504 AVKKM 518
            +K +
Sbjct: 129 VIKHL 133


>UniRef50_Q06640 Cluster: F-box protein YDR306C; n=4;
           Saccharomycetaceae|Rep: F-box protein YDR306C -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 478

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +3

Query: 300 EEINYKEMLNSLEGAAFQSRLPFDKMSSLEAECFSDLQGPSNCAFIQIRNRILKMWFADP 479
           E +  KE+ ++++     + L F + SS++ + F D+Q P N  ++++   I   +  D 
Sbjct: 260 ETVKLKELFSAIKNFTKLTHLSFPR-SSIDCQGFQDIQWPQNLRYLKLSGGITNEFVIDT 318

Query: 480 K 482
           K
Sbjct: 319 K 319


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,941,280
Number of Sequences: 1657284
Number of extensions: 6027969
Number of successful extensions: 13753
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13749
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)