Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.6  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 146 IRSIREK*SHISQSYVSGRSQRVVF 220
           ++ IR+  SH  +SYV+G +   VF
Sbjct: 84  LKFIRKYGSHFIESYVTGNALYQVF 108


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 7   SARGFFRTDFNLL 45
           SA GFF  DF LL
Sbjct: 356 SAAGFFPVDFTLL 368


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +3

Query: 3   EFGTRVFSDRFQLITLFLNISLL 71
           +FG   +S  ++ I++F+N+++L
Sbjct: 109 QFGLLGYSINYRRISIFVNLAIL 131


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 356 RLKCCSFKTIKHFFIVNFFNIVTLWIL 276
           R+      T+K F +  F+    LW+L
Sbjct: 155 RIAAKGLPTLKLFALHEFYGFCYLWVL 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,889
Number of Sequences: 336
Number of extensions: 1649
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)