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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308F01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   186   4e-46
UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   163   2e-39
UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   150   2e-35
UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   132   4e-30
UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   132   6e-30
UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   130   2e-29
UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   127   1e-28
UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   124   2e-27
UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   117   1e-25
UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   116   4e-25
UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   116   4e-25
UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   113   2e-24
UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   113   3e-24
UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   112   4e-24
UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   112   4e-24
UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   109   3e-23
UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   109   3e-23
UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   109   5e-23
UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   108   9e-23
UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   107   2e-22
UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   106   3e-22
UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   106   4e-22
UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   105   6e-22
UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   105   8e-22
UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   104   1e-21
UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   104   1e-21
UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   102   4e-21
UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   102   6e-21
UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   8e-21
UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   8e-21
UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   8e-21
UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   1e-20
UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   101   1e-20
UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;...   100   4e-20
UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    99   7e-20
UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    97   2e-19
UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    97   2e-19
UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    97   3e-19
UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    93   3e-18
UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    93   4e-18
UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H; ...    93   4e-18
UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    93   5e-18
UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2...    91   1e-17
UniRef50_Q9XMH4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    91   2e-17
UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H; ...    90   3e-17
UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    90   3e-17
UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2...    89   4e-17
UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    89   4e-17
UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    89   6e-17
UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4; Dika...    89   8e-17
UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H; ...    87   2e-16
UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    87   3e-16
UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    87   3e-16
UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    86   4e-16
UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2...    85   7e-16
UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi (c...    66   1e-15
UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    84   2e-15
UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H; ...    83   3e-15
UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2...    83   3e-15
UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    83   5e-15
UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H; ...    82   7e-15
UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H; ...    81   2e-14
UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2...    81   2e-14
UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    80   3e-14
UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    80   3e-14
UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    80   3e-14
UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/...    77   2e-13
UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2; cell...    77   2e-13
UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    77   2e-13
UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    77   2e-13
UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    75   8e-13
UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    75   1e-12
UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H; ...    75   1e-12
UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    75   1e-12
UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    74   2e-12
UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H; ...    74   2e-12
UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1 ...    74   2e-12
UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1...    73   4e-12
UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase, s...    73   5e-12
UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    73   5e-12
UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H; ...    72   7e-12
UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    72   9e-12
UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H; ...    72   9e-12
UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H; ...    71   2e-11
UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H; ...    71   2e-11
UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H; ...    71   2e-11
UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n...    69   5e-11
UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    69   5e-11
UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H; ...    69   5e-11
UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H; ...    69   7e-11
UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H; ...    69   9e-11
UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H; ...    69   9e-11
UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n...    68   1e-10
UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H; ...    68   1e-10
UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    66   3e-10
UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    66   5e-10
UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba...    51   7e-10
UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2...    65   1e-09
UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    64   2e-09
UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    64   2e-09
UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    63   3e-09
UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    62   6e-09
UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    62   6e-09
UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H; ...    62   7e-09
UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG249...    62   1e-08
UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit ...    62   1e-08
UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba...    61   1e-08
UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H; ...    61   1e-08
UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H (F(...    61   2e-08
UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase, s...    48   3e-08
UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    60   4e-08
UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=...    59   5e-08
UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1...    59   5e-08
UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4; Ther...    59   7e-08
UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H (F(...    59   7e-08
UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1; Blas...    58   9e-08
UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    58   9e-08
UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    58   1e-07
UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H; ...    58   1e-07
UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH dehydro...    58   2e-07
UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1; ...    57   3e-07
UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase, s...    56   4e-07
UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2...    56   4e-07
UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase, s...    56   7e-07
UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2; ...    55   9e-07
UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1...    55   9e-07
UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H; ...    54   2e-06
UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;...    53   3e-06
UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    53   5e-06
UniRef50_Q7GEL5 Cluster: NDH-A protein; n=7; Magnoliophyta|Rep: ...    52   6e-06
UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase, s...    52   1e-05
UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5; ...    51   1e-05
UniRef50_Q75YP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    51   1e-05
UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    51   2e-05
UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H; ...    51   2e-05
UniRef50_P08834 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    51   2e-05
UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    50   3e-05
UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;...    49   6e-05
UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Re...    48   2e-04
UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;...    47   3e-04
UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n...    47   3e-04
UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    44   0.002
UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa...    44   0.002
UniRef50_A2BJ97 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    40   0.035
UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4; Sulf...    40   0.046
UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    39   0.080
UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    37   0.32 
UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    37   0.32 
UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    36   0.56 
UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain 4...    36   0.74 
UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    36   0.74 
UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    35   0.98 
UniRef50_A1ASR4 Cluster: Respiratory-chain NADH dehydrogenase, s...    35   1.3  
UniRef50_Q8PUL3 Cluster: Ech Hydrogenase, Subunit; n=3; Methanos...    34   1.7  
UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase, s...    33   3.0  
UniRef50_A3DNE8 Cluster: Hydrogenase-4 component C; n=1; Staphyl...    33   4.0  
UniRef50_Q9X0U0 Cluster: NADH dehydrogenase, putative; n=4; Ther...    32   6.9  
UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    32   6.9  
UniRef50_A6DBV1 Cluster: Ech Hydrogenase, Subunit; n=1; Caminiba...    32   9.2  

>UniRef50_Q0WX42 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=44; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Apoda limacodes
          Length = 310

 Score =  186 bits (452), Expect = 4e-46
 Identities = 98/162 (60%), Positives = 107/162 (66%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNYALLGGLR+VAQTISYEV                    F  YQ+            
Sbjct: 130 SNSNYALLGGLRAVAQTISYEVSLALIMMSCIIFIMDFNLLKFMDYQKLCWFMFIMIPLG 189

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFDFAEGE ELVSGFNIEY  GGFALIFLAEYSSILF+ M  +++ 
Sbjct: 190 LCWLSSSMAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFLAEYSSILFMSMFFILMY 249

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           MGGY+L   FYLK+ LISFLFI VRGTLPRYRYDKL+YLA K
Sbjct: 250 MGGYSLSILFYLKMVLISFLFIWVRGTLPRYRYDKLMYLAWK 291


>UniRef50_P18929 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1786; cellular organisms|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Drosophila melanogaster (Fruit
           fly)
          Length = 312

 Score =  163 bits (397), Expect = 2e-39
 Identities = 85/173 (49%), Positives = 103/173 (59%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNYALLGGLR+VAQTISYEV                   +F+ YQ             
Sbjct: 127 SNSNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMA 186

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFDFAEGE ELVSGFN+EY  GG ALIF+AEY+SILF+ M+  +I 
Sbjct: 187 LVWVSISLAETNRNPFDFAEGESELVSGFNVEYSSGGLALIFMAEYASILFMSMLFCVIF 246

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           +         Y+KL  ISF+FI VRGTLPR+RYDKL+YLA K   ++ +   +
Sbjct: 247 LPCDVFNLLIYMKLTFISFVFIWVRGTLPRFRYDKLMYLAWKCFLSFSLNYLL 299


>UniRef50_P92111 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=40; Deltocephalinae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Flexamia delongi
          Length = 310

 Score =  150 bits (364), Expect = 2e-35
 Identities = 79/162 (48%), Positives = 98/162 (60%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y++LG +RS++Q ISYEV                    +Y +Q             
Sbjct: 123 SNSVYSMLGCIRSISQAISYEVSLSLILLCFFLLVDSYSFISYYNFQFSLWLIMLSLPIF 182

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NRTPFDF+EGE ELVSGFN+EY  GGFAL+F++EYSSI+FI MI  +I 
Sbjct: 183 FRWLSCCMAESNRTPFDFSEGESELVSGFNVEYGGGGFALLFISEYSSIIFISMITCVIF 242

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +G       FY+KL L+ FLFI VR TLPRYRYDKL+YLA K
Sbjct: 243 LGSDFCSLIFYIKLVLMCFLFIWVRATLPRYRYDKLMYLAWK 284


>UniRef50_Q0QJ87 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Xenos vesparum
          Length = 318

 Score =  132 bits (320), Expect = 4e-30
 Identities = 74/173 (42%), Positives = 95/173 (54%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS+Y+ L  LR V Q ISYE+                      + Q+            
Sbjct: 135 SNSSYSFLSALRMVVQMISYEISLMFLLLSIMVSVESFSVLNLEMVQKYLWLVSCYMLLS 194

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NR PFDF EGE ELVSGFNIEY  G FALIF+AEY SILF+  ++VI  
Sbjct: 195 VMIFVIFLAESNRVPFDFIEGESELVSGFNIEYGSGYFALIFVAEYLSILFMCYMMVIFF 254

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           M G  L F+FYLKL  + +L++ VRG+ PR+RYDKL+ +A K      + LF+
Sbjct: 255 MIGNLLSFYFYLKLIFLIYLYVLVRGSFPRFRYDKLLLMAWKIFLPLTLCLFM 307


>UniRef50_Q68RL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=8; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Glycaspis brimblecombei
          Length = 306

 Score =  132 bits (318), Expect = 6e-30
 Identities = 70/162 (43%), Positives = 89/162 (54%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS+YA LG +RSVAQ++SYEV                    F+  QE            
Sbjct: 125 SNSSYATLGCIRSVAQSVSYEVSFFIMILTVIFFVGSFNLLEFFKTQEYSWIGCFTVPMF 184

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFDF+EGE ELVSGFNIEY    FA +FL+EY SI+F   +L +  
Sbjct: 185 FMMFVSMLAELNRTPFDFSEGESELVSGFNIEYGGTSFAFLFLSEYLSIIFSSFLLTLFF 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
               N+  FF++K+   SF  + +RG+LPRYRYDKL+ L  K
Sbjct: 245 CNSLNVNSFFFVKIVFFSFFIVLIRGSLPRYRYDKLMNLCWK 286


>UniRef50_Q6JCT2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=14; Aleyrodidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Aleurodicus dispersus
          Length = 318

 Score =  130 bits (313), Expect = 2e-29
 Identities = 70/172 (40%), Positives = 91/172 (52%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNYA++G +RS+AQ ISYE+                   + ++ Q+            
Sbjct: 124 SNSNYAMIGLMRSIAQMISYEINLMIIIMTIVNLTEQLNFNYMFIMQKYMMFYLYLMFLF 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFDF+EGE EL+SGFNIEY    FA IFLAEYS+IL + +I + + 
Sbjct: 184 YIWIITILAETNRTPFDFSEGESELISGFNIEYSSFSFAFIFLAEYSNILIMSLITLTMF 243

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
                    F+    ++ FLFI  R TLPR+RYDKL+YL   K     I  F
Sbjct: 244 FNMKMSSMIFFFTFMILCFLFIWTRCTLPRFRYDKLMYLTWIKFLPLTILYF 295


>UniRef50_Q6JT33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=12; Araneae|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Heptathela hangzhouensis
          Length = 304

 Score =  127 bits (307), Expect = 1e-28
 Identities = 72/162 (44%), Positives = 89/162 (54%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS ++LLG  R VAQ ISYEV                      +YQE            
Sbjct: 121 SNSKFSLLGSYRGVAQMISYEVSFMFIILGLLMISNSYLLIDILIYQEILWFFLGNLILL 180

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFDFAEGE ELVSGFN+E+  GGFA+IF++EYSSI+ I    +I+ 
Sbjct: 181 TMWLIVCMAELNRTPFDFAEGESELVSGFNVEFMGGGFAIIFMSEYSSIMMISTFSIIMF 240

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            G + L F   L L L+  L + VRG+ PR+RYDKL+ LA K
Sbjct: 241 FGSFELNFMI-LSL-LLMVLVLWVRGSFPRFRYDKLMLLAWK 280


>UniRef50_Q68RK6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=51; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Diuraphis noxia (Russian wheat aphid)
          Length = 315

 Score =  124 bits (298), Expect = 2e-27
 Identities = 68/173 (39%), Positives = 94/173 (54%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNY++LG +R ++Q ISYEV                    FY+YQ             
Sbjct: 131 SNSNYSVLGMIRFISQMISYEVSMMIIIMNLMFLINSFNLNDFYIYQMNSKFFFFLFLIF 190

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR+PFDF+EGE ELVSGFNIE+    F  IF++EY SI+F+ M+L  + 
Sbjct: 191 ILLLISFMAEMNRSPFDFSEGESELVSGFNIEFSSMSFIFIFMSEYMSIMFMGMLLCEMF 250

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
            G    +F+  + + +  F+ I +RG LPR+RYDKL+YL  K I    + LF+
Sbjct: 251 FGLMMNKFYLNIFILIFMFMVIWLRGFLPRFRYDKLMYLIWKLILPLSLFLFM 303


>UniRef50_P03886 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3058; root|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Homo sapiens (Human)
          Length = 318

 Score =  117 bits (282), Expect = 1e-25
 Identities = 71/180 (39%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNYAL+G LR+VAQTISYEV                        QE            
Sbjct: 123 SNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWPLA 182

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFD AEGE ELVSGFNIEY  G FAL F+AEY++I+ +  +   I 
Sbjct: 183 MMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIF 242

Query: 363 MG-GYN------LRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           +G  Y+         +F  K  L++ LF+ +R   PR+RYD+L++L  K      + L +
Sbjct: 243 LGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLM 302


>UniRef50_Q8HET7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=24; Formica|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Formica truncorum
          Length = 293

 Score =  116 bits (278), Expect = 4e-25
 Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+++G +RSV+Q +SYEV                    F  YQ             
Sbjct: 107 SNSIYSMMGSMRSVSQMLSYEVSFIFIIFILMIMSESYSFLDFMNYQIYVWYLFIFYPLF 166

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII- 359
                   AE NR+P DF EGE ELVSGFNIEY  GGF LIFLAEY  I+F   + V++ 
Sbjct: 167 LMYFISVLAELNRSPMDFIEGESELVSGFNIEYFSGGFTLIFLAEYGMIIFFSFLSVLLF 226

Query: 360 -NMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
            N+  Y+   F ++ + ++S L I +RG LPR RYD+L+YL  K I
Sbjct: 227 TNLLKYS-NMFMFMFIMVMSCLVIFMRGLLPRMRYDELMYLCWKII 271


>UniRef50_P48897 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=20; Sigmurethra|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Albinaria coerulea (Land snail)
          Length = 299

 Score =  116 bits (278), Expect = 4e-25
 Identities = 71/167 (42%), Positives = 88/167 (52%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+ LGG+R+ AQTISYEV                  Y +Y                
Sbjct: 123 SNSKYSFLGGMRAAAQTISYEVSMLLLLFFAVLMYRT---YSWYEAGLSSPIGIIIFIIM 179

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFDFAEGE ELVSGFNIEY  G FAL+FLAEYSSILF+ M+  +  
Sbjct: 180 FIWFASCLAETNRAPFDFAEGESELVSGFNIEYYGGMFALLFLAEYSSILFMCMMSTVWF 239

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTY 503
           +   ++ F   L + LI+  F+  RG  PR+RYD L+ L  K    +
Sbjct: 240 LYS-DMIFIMTLLILLIAMAFLFARGVYPRHRYDLLMNLCWKSFLPF 285


>UniRef50_Q37546 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=112; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Lumbricus terrestris (Common earthworm)
          Length = 308

 Score =  113 bits (272), Expect = 2e-24
 Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YALLG LR VAQTISYEV                     + Y              
Sbjct: 126 SNSKYALLGALRGVAQTISYEVSMSLILLSSLIILSTMDFTKMFSYS---WILFMFIPLA 182

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFDFAEGE ELVSGFN+EY  G FALIF+AEY++IL + +   +I 
Sbjct: 183 VVWFITNLAETNRTPFDFAEGESELVSGFNVEYSAGLFALIFMAEYANILIMSLFTSVIF 242

Query: 363 M----GGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           M     G        L+   ++ LF+ VR T PR RYD L+ L  K      + L +
Sbjct: 243 MSTCASGMASDLVLILQTITLAMLFVWVRATYPRMRYDHLMNLTWKSFLPLSLALLM 299


>UniRef50_Q8HQJ2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=7; Chelicerata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ornithodoros moubata (Soft tick)
          Length = 324

 Score =  113 bits (271), Expect = 3e-24
 Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y LLG  R +AQ ISYEV                       +QE            
Sbjct: 122 SNSKYGLLGSFRGLAQVISYEVGMSFVLMGIIYFSGSYNIMVVSEFQEKFWMVWGMTGLF 181

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR+PFD  EGE ELVSGFN+EY   GFAL+F++EY +I+F+ M+  I+ 
Sbjct: 182 FLWMISSFAEVNRSPFDLCEGESELVSGFNVEYGSYGFALLFISEYGNIIFMSMLSCIMF 241

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK-----KIFTYFIKLFI 521
            GG     +  L L +  +L++ +RGTL R+RYD L+ +A K      +F Y+I + I
Sbjct: 242 FGGLG---YMSLLLLMFMYLYLLIRGTLVRFRYDFLMMVAWKVVLPCSMFFYYIFMMI 296


>UniRef50_Q8HQ04 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=7; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Thrips imaginis (Plague thrips)
          Length = 306

 Score =  112 bits (270), Expect = 4e-24
 Identities = 67/164 (40%), Positives = 85/164 (51%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNY+L+G +R++AQTISYEV                  Y     Q+            
Sbjct: 126 SNSNYSLIGSMRALAQTISYEVSLVFILLSSLFISSSLSFYSLVETQKLFYFFLFIVPFY 185

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFDFAEGE ELVSGFN E+    FA+IF+AEY  IL   ++  ++ 
Sbjct: 186 MWLFSTV-AELNRTPFDFAEGESELVSGFNTEFSSSPFAIIFMAEYLMILIFSLLTSMMY 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
               N      +K   + F FI +R TLPRYRYDKL+ L+ K I
Sbjct: 245 FCS-NTNLLSMVKTMTMMFFFIWIRATLPRYRYDKLMNLSWKFI 287


>UniRef50_Q9MIZ0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=284; Coelomata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 324

 Score =  112 bits (270), Expect = 4e-24
 Identities = 68/180 (37%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YAL+G LR+VAQTISYEV                    F   QE            
Sbjct: 129 SNSKYALIGALRAVAQTISYEVSLGLILLSAVIFSGGYTLQTFNTTQEDTWLLLPLWPLA 188

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD  EGE ELVSGFN+EY  G FAL FLAEYS+IL +     ++ 
Sbjct: 189 IMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYSNILLMNTHSTVLF 248

Query: 363 MGG-------YNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           +G          +      K  ++S LF+ +R + PR+RYD+L++L  K      + L +
Sbjct: 249 LGASFTPDAPELMTISIATKTAMLSILFLWMRASYPRFRYDQLMHLIWKNFLPITLVLVL 308


>UniRef50_Q6E0W1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Paraspadella gotoi|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paraspadella gotoi
          Length = 297

 Score =  109 bits (263), Expect = 3e-23
 Identities = 66/164 (40%), Positives = 86/164 (52%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+L+G +RSVAQTISYEV                    + L               
Sbjct: 130 SNSKYSLMGAIRSVAQTISYEVTMAIIIIHHVIIN------MYMLKNLGVTPTNFFIIIM 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NR PFDFAEGE ELVSGFN E+    F LIFLAEY+ + F+ ++  ++ 
Sbjct: 184 VMMMISMLAESNRAPFDFAEGESELVSGFNTEFSSIPFVLIFLAEYTMMFFMSLLCSLLF 243

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
              +   FFF L +    F FI  RGTLPR+RYD+L+ +A K +
Sbjct: 244 FSTHLYMFFFLLMV----FFFIWARGTLPRFRYDQLMMMAWKSL 283


>UniRef50_Q96186 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Pectinidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Pecten maximus (King scallop) (Pilgrim's clam)
          Length = 354

 Score =  109 bits (263), Expect = 3e-23
 Identities = 68/184 (36%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA+ G +R++AQ ISYEV                      L Q             
Sbjct: 164 SNSRYAMFGAVRALAQVISYEVMLVFLYLCPFFVVGSLDLESVSLSQVSGCNGGVLFLVL 223

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NR PFDF EGE ELVSGFN+EY  GGFA+IF+AEYS+ILF+  +  ++ 
Sbjct: 224 PWWVFCVLAESNRAPFDFVEGESELVSGFNVEYGSGGFAMIFIAEYSNILFLSTLTSVLF 283

Query: 363 MGGYNL----RFFFYLKLRLIS--------FLFI*VRGTLPRYRYDKLIYLAXKKIFTYF 506
           +GG NL     +F  +   +I         FL +  R + PRYRYD L+ L   +I    
Sbjct: 284 LGGGNLLGNGEYFGLISSSVIGSFFSFMVVFLIVLCRSSFPRYRYDMLMKLIWCQILPIL 343

Query: 507 IKLF 518
           +  F
Sbjct: 344 MSCF 347


>UniRef50_Q00860 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Mytilus|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Mytilus edulis (Blue mussel)
          Length = 305

 Score =  109 bits (261), Expect = 5e-23
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+LLG +R++AQ+ISYE+                      ++Q+            
Sbjct: 126 SNSKYSLLGAVRAMAQSISYEIPMGFIFFCVVLCSGVFMFQEISVFQQSLFFFFLPLCVV 185

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AETNR PFDF EGE ELVSG+N+EY  GGFA++F+AEYSSIL   ++   +
Sbjct: 186 MLVWMLCMLAETNRAPFDFVEGESELVSGYNVEYSGGGFAVMFIAEYSSILLSSVMSAAM 245

Query: 360 NMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYL 479
             GG      F+  + + +  F+ VR +LPR RYDKL+ L
Sbjct: 246 FFGGNEALVGFF--MMVFAIFFVVVRASLPRLRYDKLMNL 283


>UniRef50_Q766W0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Crustacea|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Vargula hilgendorfii (Sea firefly) (Cypridina
           hilgendorfii)
          Length = 318

 Score =  108 bits (259), Expect = 9e-23
 Identities = 63/173 (36%), Positives = 87/173 (50%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA++G LR+VAQ ISYEV                  Y   L+              
Sbjct: 138 SNSKYAVMGSLRAVAQMISYEV---VLAMVVMLFVFFLGSYDMGLWGYTSLLGVGLLPLL 194

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E+ R+PFD AEGE ELVSGFN EY   GFAL+F+ EY ++L + M+  ++ 
Sbjct: 195 WIWMTVMLGESQRSPFDLAEGESELVSGFNTEYSGVGFALLFMGEYGAMLLMSMLSSVLF 254

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           +G      FF + L    F+++  R T PR RYD+L+YLA K +    + L +
Sbjct: 255 LGSVVDSIFFPVVLWFFGFVYLWARATFPRVRYDQLMYLAWKSLLPNLLWLTV 307


>UniRef50_Q4L1B9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Lepeophtheirus salmonis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Lepeophtheirus salmonis (salmon
           louse)
          Length = 295

 Score =  107 bits (256), Expect = 2e-22
 Identities = 65/164 (39%), Positives = 83/164 (50%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN  Y+ +GG+R VAQ ISYEV                      L+ E            
Sbjct: 116 SNCVYSHIGGVRGVAQVISYEVVFTILVFSLMSLSGSLTLVGSMLFSEYFYVYMLSPLLV 175

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFDF+EGE ELVSGFN EY   GFALIF+A+Y+SIL +  +  +  
Sbjct: 176 YLWFLTGLAETNRTPFDFSEGESELVSGFNTEYGGSGFALIFMAQYASILLLSSLFSLFL 235

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           +    L   FY+   L  FL++  R T PR+RYD L+ L  K +
Sbjct: 236 LKSSGL--LFYVISSLGGFLWVWSRVTYPRHRYDWLMSLCWKSL 277


>UniRef50_Q15K54 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Flustrellidra hispida|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Flustrellidra hispida
          Length = 283

 Score =  106 bits (255), Expect = 3e-22
 Identities = 65/164 (39%), Positives = 82/164 (50%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YAL+G +R +AQTISYEV                  Y                   
Sbjct: 119 SNSKYALMGSMRGLAQTISYEV-----CMSILILIAILSLYTADFASMTLPVGLHNPLLL 173

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFD AEGE ELVSGFN EY  G F+ +F+AEY S++ + MI  I+ 
Sbjct: 174 AMWTICIPAETNRTPFDHAEGESELVSGFNTEYSGGLFSFLFIAEYGSVILMSMITSILF 233

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
              Y L F+ Y+      F+F+ +R T PR RYD L+  A K +
Sbjct: 234 FSSYTLFFYLYM------FMFLWLRATEPRMRYDTLMMTAWKTL 271


>UniRef50_P48899 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=144; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Cyanidium caldarium
          Length = 344

 Score =  106 bits (254), Expect = 4e-22
 Identities = 68/174 (39%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LGGLRS AQ ISYEV                      L Q+            
Sbjct: 146 SNSKYAFLGGLRSAAQIISYEVSIGLIIINVLLCSGTLNLKEIVLAQQNIWYIFPLFPLF 205

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR+PFD  E E ELV+G+N+EY   GFAL FL EY++I+ I  +  I+ 
Sbjct: 206 LMFFISSLAETNRSPFDLPEAEAELVAGYNVEYSAMGFALFFLGEYTNIILISAVSTILF 265

Query: 363 MGGYNLRF------------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           + G+   F            +F  K  +I  LFI VR   PRYRYD+LI L  K
Sbjct: 266 LAGWLPPFDIFLFNWIPNSIWFGFKTIIILVLFIWVRAAFPRYRYDQLIQLGWK 319


>UniRef50_O99824 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=17; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Rhipicephalus sanguineus (Brown dog tick)
          Length = 313

 Score =  105 bits (252), Expect = 6e-22
 Identities = 64/164 (39%), Positives = 80/164 (48%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+L+G  R  AQ ISYEV                    F   QE            
Sbjct: 125 SNSKYSLIGSYRGFAQVISYEVSMAMILISLAIIPQSYNFISFLKIQETFPLIFSFLPIF 184

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR PFD AEGE ELVSGFNIEY    FA+IF++EY  I+ I  +   + 
Sbjct: 185 IIWIITVLAELNRVPFDLAEGESELVSGFNIEYGSWLFAIIFMSEYGDIMMISFLTYYLF 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           +G  NL  FF L   ++  + I +RGT  R RYD+L+ +A K I
Sbjct: 245 LGLKNLILFFVL---ILMTMIIMIRGTYVRMRYDQLMMMAWKMI 285


>UniRef50_Q06SB9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Heteroconchia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Hiatella arctica
          Length = 314

 Score =  105 bits (251), Expect = 8e-22
 Identities = 65/166 (39%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS+YALLG +R++AQ+ISYEV                    F + +             
Sbjct: 132 SNSSYALLGAMRALAQSISYEVVLGTLILCPCLYSGGLSVNSFLMTK--GLYGGLSVEIF 189

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFDF EGE ELV+GFN+E+   GFALI LAEY SILF  ++  ++ 
Sbjct: 190 FLWMAVLLAETNRAPFDFVEGESELVAGFNVEFGGFGFALIALAEYGSILFSSVLTGVLF 249

Query: 363 MGGYNLRFFFYLKLRL----ISFLFI*VRGTLPRYRYDKLIYLAXK 488
            G +       + + +    +S+LFI VR T PR+RYDKL+  + K
Sbjct: 250 FGSFFEGILSGVLISVWGVFLSYLFILVRATFPRFRYDKLMSFSWK 295


>UniRef50_Q8M6U9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=15; Bilateria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Tigriopus japonicus
          Length = 306

 Score =  104 bits (250), Expect = 1e-21
 Identities = 62/160 (38%), Positives = 82/160 (51%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YAL+G LR +AQ+ISYE+                       +              
Sbjct: 125 SNSKYALIGSLRGIAQSISYEISLSLIVLSMMLLWQSFSIESAADFLPSPGLTVFLFPLL 184

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NRTPFDFAEGE ELVSGFN+E+    F L+F++EY  ILF  ++   + 
Sbjct: 185 SLWLISCLAESNRTPFDFAEGESELVSGFNVEFGGIFFVLMFMSEYGMILFFSLLTSGLF 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLA 482
           + G  L    +    LI F ++ VR TLPR+RYDKL+ LA
Sbjct: 245 ISGTPLCMSGFFWSLLIVFFWMWVRATLPRFRYDKLMMLA 284


>UniRef50_Q6EF18 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=78; Braconidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Cotesia acuminata
          Length = 218

 Score =  104 bits (250), Expect = 1e-21
 Identities = 55/148 (37%), Positives = 77/148 (52%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS+++++G +RS+AQ+ISYEV                  +    + +            
Sbjct: 71  SNSSFSMIGSIRSIAQSISYEVVFSIIILIMMTNINSMNLFNLIFFNKFNNFSLIYFPLM 130

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFD +EGE ELVSGFNIEY    F LIFL+EYSSI+F+  +  ++ 
Sbjct: 131 LIILFTMLAEINRTPFDLSEGESELVSGFNIEYSSSKFILIFLSEYSSIIFMMFLFCLLM 190

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTL 446
               N   FFYLK+ ++ F    +R TL
Sbjct: 191 FMSNNFNIFFYLKVTMMIFFITWIRMTL 218


>UniRef50_Q85UH6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=9; Urochordata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ciona savignyi (Pacific transparent sea
           squirt)
          Length = 344

 Score =  102 bits (245), Expect = 4e-21
 Identities = 60/172 (34%), Positives = 86/172 (50%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+L+GG+R VAQ ISYEV                   FF  +Q             
Sbjct: 125 SNNIYSLIGGIRGVAQMISYEVVLGFFIMLLLLLMGSYNWEFFLYFQSSYVFWGGMFMFM 184

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR PFD  EGE ELVSGFN+EY    FAL+FL EY +I F+  I +++ 
Sbjct: 185 VSWIGMMLAELNRAPFDLIEGESELVSGFNVEYGGFIFALLFLGEYMNIWFMSWITILLF 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
            GG    +F  +K  ++  + + +R  LPR+++  LI +   KI+   + +F
Sbjct: 245 FGG---GYFLVIKSFVVVLVILYIRSLLPRFKFTDLIMITW-KIYLPLVLMF 292


>UniRef50_Q6SL32 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Armillifer armillatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Armillifer armillatus
          Length = 305

 Score =  102 bits (244), Expect = 6e-21
 Identities = 63/160 (39%), Positives = 85/160 (53%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y LLGG+RSVAQT+SYEV                  Y   +  E            
Sbjct: 124 SNSKYGLLGGVRSVAQTVSYEVSLVLVVMYWVLYMGG---YGLEVTMEGVWLVFLNILMF 180

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   +E NR+PFDF+EGE ELVSG+N+EY    F  IF++EY  ++F   +L  + 
Sbjct: 181 VIMGVVCISELNRSPFDFSEGESELVSGYNVEYGSLLFVYIFMSEYGFVVFWSGLLGWMF 240

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLA 482
           MGG        LK+ L+S+  +  RG LPR+RYDKL++L+
Sbjct: 241 MGGLG-GLIGGLKVMLLSWGVLWWRGVLPRFRYDKLMFLS 279


>UniRef50_Q94QP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Inversidens japanensis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Inversidens japanensis
          Length = 292

 Score =  101 bits (243), Expect = 8e-21
 Identities = 60/164 (36%), Positives = 85/164 (51%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS +ALLG +R++AQTISYE+                    F                 
Sbjct: 118 TNSKFALLGAMRAMAQTISYEIPMILTLIFYGLISNTLDLSAFCENLSLKFKGLLIIPMT 177

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFDFAEGE ELVSGFN+EY    FA++F+AEY +ILF+ ++  I+ 
Sbjct: 178 LVWLTIMLAETNRAPFDFAEGESELVSGFNVEYSGTKFAMLFMAEYLNILFMGLLSSILL 237

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           +   +          L +F F+  RGTLPR+RYD ++ +A + +
Sbjct: 238 LNSTSW-------APLFTFFFLLARGTLPRHRYDLMMGMAWESL 274


>UniRef50_Q1W1N4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=675; Arachnida|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Pardosa hyperborea
          Length = 306

 Score =  101 bits (243), Expect = 8e-21
 Identities = 64/162 (39%), Positives = 81/162 (50%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS Y  LG +RSVAQ ISYEV                        Q             
Sbjct: 125 TNSKYCHLGSIRSVAQMISYEVPFFMMILFLVLLSQSYSFTQMEETQYLLYYFWGNMLLF 184

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR+PFDFAEGE ELVSGFN+EY  G FALIFL+EY S+L + MI  ++ 
Sbjct: 185 MMWLSSCLAETNRSPFDFAEGESELVSGFNVEYMGGLFALIFLSEYLSMLILSMISTMMF 244

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                      + + +I+   I VRGT PR+RYD L+ ++ K
Sbjct: 245 FSPIKSINSMIIMI-MITISLIWVRGTYPRFRYDMLMLMSWK 285


>UniRef50_P34847 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=5; Endopterygota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Apis mellifera ligustica (Common honeybee)
          Length = 305

 Score =  101 bits (243), Expect = 8e-21
 Identities = 60/157 (38%), Positives = 76/157 (48%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN NYA+LG +R V+  IS+E+                    F+ +Q             
Sbjct: 122 SNCNYAILGSMRLVSTMISFEINLFFLVFSLMMMVESFSFNEFFFFQNNIKFAILLYPLY 181

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E NRTPFD  EGE ELVSGFNIEY    F LIFL+EY +I+F+ +IL ++ 
Sbjct: 182 LMMFTSMLIELNRTPFDLIEGESELVSGFNIEYHSSMFVLIFLSEYMNIMFMSVILSLMF 241

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
            G       F L       L I +RG LPR RYDKL+
Sbjct: 242 YGFKYWSIKFILIYLFHICLIIWIRGILPRIRYDKLM 278


>UniRef50_A3E7R3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=16; Coelomata|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Nyctalus leisleri (Leisler's bat)
          Length = 299

 Score =  101 bits (242), Expect = 1e-20
 Identities = 60/164 (36%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
 Frame = +3

Query: 18  ALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXXXXX 197
           AL+G L    QT  YEV                        QE                 
Sbjct: 128 ALIGALXXXXQTXXYEVTLAIIILSILLMNGSFTLSTLITTQEYTWLILPSWPLAMMWFI 187

Query: 198 XXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN 377
              AETNR PFD  EGE ELVSGFN+EY  G FAL FLAEY++I+ +  + +I+ +G YN
Sbjct: 188 STLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYN 247

Query: 378 LRFF-------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
              F       F LK  L +  F+ +R + PR+RYD+L++L  K
Sbjct: 248 NSMFPEMYTANFMLKALLFTTXFLWIRASYPRFRYDQLMHLLWK 291


>UniRef50_Q3T4B4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1 -
           Smittium culisetae (Gut fungus)
          Length = 323

 Score =  101 bits (241), Expect = 1e-20
 Identities = 63/181 (34%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
 Frame = +3

Query: 6   NSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXX 185
           NS Y+L+G LR+ AQ +SYE+                      L+Q+             
Sbjct: 128 NSKYSLMGCLRTTAQLVSYELLLGLTILTVILIINNFNINNIILFQQSIYFFIPLLPLFI 187

Query: 186 XXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINM 365
                  AETNR PFD  E E ELVSG   EY    FALIFL EY +++ +  ++ I+ +
Sbjct: 188 IIFISAIAETNRPPFDLVESESELVSGAFTEYSSFSFALIFLGEYGAMITMSTLITILFL 247

Query: 366 GGYNLRFFFY---------LKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
           GGY   FF           +K+  + F FI VR TLPR ++++LI L  K +F   + LF
Sbjct: 248 GGYLQPFFINSYFDSISLGIKICFLLFCFIWVRSTLPRVKFNQLISLCWKSLFPLVLGLF 307

Query: 519 I 521
           I
Sbjct: 308 I 308


>UniRef50_P92558 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=365; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 325

 Score = 99.5 bits (237), Expect = 4e-20
 Identities = 62/174 (35%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG LRS AQ +SYEV                      + Q+            
Sbjct: 128 SNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQIWFGIPLFPVL 187

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD  E E ELV+G+N+EY   GFAL FL EY++++ +  +  +  
Sbjct: 188 VMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLFF 247

Query: 363 MGGY----NLRFF--------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG+    +L  F        F +K+    FL+I VR   PRYRYD+L+ L  K
Sbjct: 248 LGGWLPILDLPIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWK 301


>UniRef50_Q64LH8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Paratomella rubra|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paratomella rubra
          Length = 313

 Score = 98.7 bits (235), Expect = 7e-20
 Identities = 69/178 (38%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS +A+LG +R+ AQ ISYEV                  YF   +              
Sbjct: 127 SNSFFAILGSIRAAAQMISYEVVMSFILVFFFLLXKTNSFYFIMDFSLYFENLLFFFFFF 186

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR+PFD  EGE ELVSGFN+EY  G FA  FLAEY  IL +  +  ++ 
Sbjct: 187 FFWMVVILAETNRSPFDLTEGESELVSGFNVEYSAGPFAFFFLAEYGMILLMSSLSGMVF 246

Query: 363 MGGYNLRFF---FYLKL----RLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKL 515
             G  L FF   FY+KL      +SF    VR T PR RYD L+ +    I  + I L
Sbjct: 247 FSG--LVFFISLFYVKLIFFIIFVSFFLFXVRCTFPRKRYDFLMDMMWVGILPFNIIL 302


>UniRef50_Q68PI9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=5; Aleyrodinae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Vasdavidius concursus
          Length = 307

 Score = 97.5 bits (232), Expect = 2e-19
 Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNSNYA++  +R++AQ ISYE+                     Y                
Sbjct: 125 SNSNYAMISMIRTIAQMISYEINIILIVLTFMVIMEKMNLSSCY---NNIMLSMYMPYML 181

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMI---LV 353
                   AET+R+PFDF+E E EL+SGFNIEY    F  +FLAEYS IL + M+   ++
Sbjct: 182 IMWLITIMAETSRSPFDFSESESELISGFNIEYSSKSFVFLFLAEYSMILNLSMVTTNMM 241

Query: 354 IINMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYL 479
           ++N    +L+   +L   +IS  FI +R TLPR+RYDK + L
Sbjct: 242 LMNTMNISLKTIMFL---MISSTFIWIRTTLPRFRYDKQMKL 280


>UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Siphonodentalium lobatum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Siphonodentalium lobatum
          Length = 295

 Score = 97.1 bits (231), Expect = 2e-19
 Identities = 63/164 (38%), Positives = 86/164 (52%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S+Y+++G +R+VAQ++SYEV                    F+L               
Sbjct: 125 SYSSYSMIGCVRAVAQSVSYEV-----CSFFSYCAQQLLEVTFFLGSSTSFFFSFLFIVI 179

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFDFAEGE ELVSGFN+EY    F LIFLAEY  ILF+  + V + 
Sbjct: 180 LWMFVCM-AETNRAPFDFAEGESELVSGFNVEYGSSLFTLIFLAEYGFILFLSSLTVSL- 237

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
              +    F+ +   ++S +FI  RG+LPR+RYD L+  + K I
Sbjct: 238 ---FFPHSFYLMWSMVLSLVFIYSRGSLPRFRYDLLMMFSWKII 278


>UniRef50_O79868 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Chlamydomonadales|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Chlorogonium elongatum
          Length = 296

 Score = 96.7 bits (230), Expect = 3e-19
 Identities = 62/173 (35%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG LRSVA  +SYE+                       + +            
Sbjct: 119 SNSKYAFLGCLRSVALMVSYELGFGAVLLSISLFLVDNSGMKSLNFGDASTNISFALLPL 178

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AET R PFD  E E ELV+G+N+EY   GFAL F+ EY+S+  + ++  + 
Sbjct: 179 FFIFLVCILAETKRVPFDLPEAEAELVAGYNVEYSSLGFALFFIGEYASMAVMSILASVY 238

Query: 360 NMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
            +GG++      LKL  I F FI VRGTLPRYRYD+ + L  K      + L+
Sbjct: 239 FLGGFSA-----LKLVCIFFGFIWVRGTLPRYRYDQFMRLGWKAFLPLSLSLY 286


>UniRef50_A3E7R8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Microchiroptera|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Hypsugo sp. FFM-2006A
          Length = 300

 Score = 93.5 bits (222), Expect = 3e-18
 Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AETNR PFD  EGE ELVSGFN+EY  G FAL  LAEY++I+ +  + + + +G YN   
Sbjct: 191 AETNRAPFDLTEGESELVSGFNVEYAGGSFALFXLAEYANIIMMNALTITLFLGAYNNPM 250

Query: 387 F-------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           F       F +K  L +  F+ +R + PR+RYD L++L  K
Sbjct: 251 FPEMYSINFTVKALLFTTFFLWIRASYPRFRYDXLMHLLWK 291


>UniRef50_Q4W8E1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Leptotrombidium|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Leptotrombidium pallidum
          Length = 293

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 59/173 (34%), Positives = 83/173 (47%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S+S Y+LLG  RS AQTISYEV                    + L +E            
Sbjct: 122 SSSTYSLLGSYRSAAQTISYEV--CLIFIIFSSIFFVKTFSIWELSEETPMLSLIHPILL 179

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE+NRTPFD  EGE ELVSGFN E++ G  +  F+ EY+ ++F+  + +I  
Sbjct: 180 LIWIFSCLAESNRTPFDLTEGESELVSGFNTEFQGGLLSFFFITEYAFMIFLSFLTIIFF 239

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           M   N   F+  ++ +ISF FI  R   PR R+D L+ +  K I    +   +
Sbjct: 240 M---NQEMFWLKQMLMISF-FIFTRSAYPRMRFDWLMKIMWKNILPIILSSLV 288


>UniRef50_Q8F7Q5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=4; Leptospira|Rep: NADH-quinone oxidoreductase subunit
           H - Leptospira interrogans
          Length = 346

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 64/186 (34%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+LLG +RS AQ ISYE+                        Q             
Sbjct: 149 SNNKYSLLGAVRSTAQMISYELPLGMSVVSIVILSGSLRLTDISASQVGLWNIFKLPGFI 208

Query: 183 XXXXXXXX--AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVI 356
                     AETNR PFD AE E ELV GF+ EY    FAL F+AEY +++ +  ++ +
Sbjct: 209 AFCLFVVAMFAETNRLPFDLAEAESELVVGFHTEYGAFKFALFFIAEYMNMITMSCVVTL 268

Query: 357 INMGGYNLRF---------------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKK 491
           +  GGY + F               FF  K+   +FLF+ VR TLPR+RYD+L+ L  KK
Sbjct: 269 LFFGGYQVPFGILEGHVLQPLFGLVFFLGKVLFFTFLFLWVRWTLPRFRYDQLMSLGWKK 328

Query: 492 IFTYFI 509
           +  + I
Sbjct: 329 LIPWAI 334


>UniRef50_Q9ZY22 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Pedinomonas minor|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Pedinomonas minor
          Length = 310

 Score = 92.7 bits (220), Expect = 5e-18
 Identities = 58/164 (35%), Positives = 76/164 (46%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S+S +A LGGLRS AQ ISYE+                       +QE            
Sbjct: 132 SSSRWAFLGGLRSAAQIISYELSLNICIFSIILCVGGLSIIKVVSFQENILLVFPLLPFI 191

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR PFD  E E ELV+G+N++Y    F   FL EY+ I+ I  I+  + 
Sbjct: 192 LISFIISLAEINRAPFDLPEAEAELVAGYNVDYGAINFTFFFLGEYTHIVLISFIMAKLF 251

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
            G  N      + +  I FL I VR  LPRYRYD+L+ L  K++
Sbjct: 252 FGSLNT---ILIPIFFI-FLIIQVRAALPRYRYDQLMKLGWKEL 291


>UniRef50_Q2YA20 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=6; cellular organisms|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Nitrosospira multiformis (strain ATCC
           25196 / NCIMB 11849)
          Length = 366

 Score = 91.1 bits (216), Expect = 1e-17
 Identities = 61/178 (34%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG +RS AQ +SYE+                        Q+            
Sbjct: 155 SNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSQSLNLGDIVKGQQGASMLNWYLIPL 214

Query: 183 XXXXXXXX----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AETNR PFD AEGE E+V+GF++EY    F + FLAEYS+++ + M+ 
Sbjct: 215 FPMFLVYFISGVAETNRAPFDVAEGESEIVAGFHVEYSGMAFTVFFLAEYSNMILVAMLA 274

Query: 351 VIINMGGY----NLRFF--------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            II +GG+    N+  F          LK   + F F+  R T PRYRYD+++ L  K
Sbjct: 275 SIIFLGGWLPPVNVAPFTLVPGFIWLILKASFLLFCFLWFRATFPRYRYDQIMRLGWK 332


>UniRef50_Q9XMH4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Lysiphlebus fabarum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Lysiphlebus fabarum
          Length = 115

 Score = 90.6 bits (215), Expect = 2e-17
 Identities = 46/97 (47%), Positives = 59/97 (60%)
 Frame = +3

Query: 231 DFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFYLKLRL 410
           D +EGE ELVSGFNIEY    F LIFLAEY+SI+F+ +I V++      L    Y  + L
Sbjct: 1   DLSEGESELVSGFNIEYSNSKFILIFLAEYTSIIFMMLIFVMMFFNNNFLNILMYFIIIL 60

Query: 411 ISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
             FL I +R TLPR RYD L+Y     I  + + LF+
Sbjct: 61  FIFLIIWIRITLPRMRYDNLMYFCWYYILPFILILFL 97


>UniRef50_A0LRI8 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
          Length = 451

 Score = 89.8 bits (213), Expect = 3e-17
 Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y LLGG+RS AQ +SYE+                        Q             
Sbjct: 163 SGSPYPLLGGVRSAAQVVSYEIAMGLSFVGVFLYSGSLSTSDIVAAQAHRWGILWAGVSF 222

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    ETNR PFD  EGE E+V GF+ EY    FAL +LAEY +++ +  ++  + 
Sbjct: 223 AVYAIAMVGETNRAPFDLPEGETEIVGGFHTEYTSLKFALFYLAEYINMVTVSALMTTLF 282

Query: 363 MGGYNLRF----------------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG+   +                +F +KL ++ F+FI +RGTLPR+RYD+ +    K
Sbjct: 283 LGGWRAPWPLSLWSQANVGWWPVLWFLIKLGIVLFVFIWLRGTLPRFRYDQFMQFGWK 340


>UniRef50_P11658 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=4; Eukaryota|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Chlamydomonas reinhardtii
          Length = 292

 Score = 89.8 bits (213), Expect = 3e-17
 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG LRSVA  +SYE+                       + E            
Sbjct: 119 SNSKYAFLGCLRSVALMVSYELSLGAALLSIGLFVTDGTGMKCLNFAEMPTTPQYAMLPL 178

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AET R PFD  E E  LV+G+N+EY   GFAL F+AEY+++  +  I  I 
Sbjct: 179 CLIFLVCILAETKRDPFDLPEAE--LVAGYNVEYSSLGFALFFIAEYANMAVMSAIASIY 236

Query: 360 NMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
            +GG++      LK+  + F F+  RGTLPRYRYD+ + L  K      +  F
Sbjct: 237 FLGGFSA-----LKITALFFAFVWTRGTLPRYRYDQFMRLGWKAFLPLTLAFF 284


>UniRef50_A0LJM4 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=5; Proteobacteria|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Syntrophobacter fumaroxidans (strain DSM
           10017 / MPOB)
          Length = 331

 Score = 89.4 bits (212), Expect = 4e-17
 Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+LLGG+R  AQ ISYE+                        QE            
Sbjct: 143 SNSKYSLLGGIRGAAQMISYELSLGLAIVPVVMQARSFSLVDIVQAQEKYPFILTQPVAF 202

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE  R PFD  E E EL +GF+ EY    F L FL EY ++  +  ++ ++ 
Sbjct: 203 AIFVISAMAEIKRIPFDLPEAENELGAGFHTEYSGMRFGLFFLGEYVNMQVLGGLVAVLF 262

Query: 363 MGGYNLRF-----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG++        + ++K+ L++ + I VRGTLPR RYD+L+ L  K
Sbjct: 263 LGGWHGPLLPPVVWLFIKIVLVALIMIWVRGTLPRLRYDQLMALGWK 309


>UniRef50_Q0H8X5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=10; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Ustilago maydis (Smut fungus)
          Length = 331

 Score = 89.4 bits (212), Expect = 4e-17
 Identities = 65/188 (34%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS YA LG LRS AQ ISYE+                        Q+            
Sbjct: 130 ANSKYAFLGSLRSTAQMISYELIYSAAVLAVILLCGTFNITEIIESQQSVWYIMPLLPIF 189

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNRTPFD  E E ELV+GF  E+    F   FLAEY SI+ +     I+ 
Sbjct: 190 ILFFVSALAETNRTPFDLPEAESELVAGFMTEHSGMIFVFFFLAEYGSIVLMSTFTAILF 249

Query: 363 MGGYNL--RFFF----YLKLR---------LISFLFI*VRGTLPRYRYDKLIYLAXKKIF 497
           +GGYN+  +  F    ++ L+         LI FLF+ +R TLPR RYD L+      + 
Sbjct: 250 LGGYNMSPQVLFAEDSFINLQSIALAVKAVLIMFLFVWIRATLPRMRYDSLMTFCWTGML 309

Query: 498 TYFIKLFI 521
              I L I
Sbjct: 310 PVAIALLI 317


>UniRef50_Q9T9H0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Halocynthia roretzi|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Halocynthia roretzi (Sea
           squirt)
          Length = 298

 Score = 89.0 bits (211), Expect = 6e-17
 Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S+S + LLG +R V+Q ISYEV                  Y+     E            
Sbjct: 121 SDSVFGLLGSVRGVSQMISYEV---VFMFFVLLFSIEVWSYWLGGVCEGTGVFGIYFKFL 177

Query: 183 XXXXXXXX--AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVI 356
                     AE NRTPFD  EGE ELVSGFN+EY   GF L+FLAEY +I FI  +  I
Sbjct: 178 LVLVWGVIVLAELNRTPFDLVEGESELVSGFNVEYAGFGFTLLFLAEYMNIWFISFLSTI 237

Query: 357 INMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
              G ++L ++  + +  +S   + VR  LPRY++ +LI L  K
Sbjct: 238 FFFGFWDLFWYLLIGIIFVSLCLL-VRCVLPRYKFTQLIDLMWK 280


>UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4;
           Dikarya|Rep: NADH dehydrogenase subunit 1 - Pleurotus
           ostreatus (Oyster mushroom) (White-rot fungus)
          Length = 346

 Score = 88.6 bits (210), Expect = 8e-17
 Identities = 63/186 (33%), Positives = 77/186 (41%), Gaps = 13/186 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS YA LG LRS A  ISYE+                        Q+            
Sbjct: 147 ANSKYAFLGSLRSTAAMISYELILSSAILIIILLTGSLNYNTIIEIQQSVWFIIPLLPVF 206

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AET+RTPFD  E E ELV+GF  E+    F   FL EYSSI+    I  I+ 
Sbjct: 207 IFYFIAILAETSRTPFDLQEAESELVAGFFTEHSSVPFVYFFLGEYSSIVLFSCITAILF 266

Query: 363 MGGYNLRFFFY-------------LKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTY 503
           +GGYNL   F              LK  +  F F+  R TLPR RYD+LI L    +   
Sbjct: 267 LGGYNLPEVFVNNSIINLQSIILGLKTCIFCFFFVWFRATLPRLRYDQLIELCWLNLLPV 326

Query: 504 FIKLFI 521
            +   I
Sbjct: 327 CVAFII 332


>UniRef50_Q82TV0 Cluster: NADH-quinone oxidoreductase subunit H;
           n=313; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Nitrosomonas europaea
          Length = 366

 Score = 87.4 bits (207), Expect = 2e-16
 Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG +RS AQ +SYE+                        Q+            
Sbjct: 155 SNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMSSSLNLGDIVAGQQGGSFLNWYLIPL 214

Query: 183 XXXXXXXX----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AETNR PFD AEGE E+V+GF+++Y    F + FLAEY++++ +  + 
Sbjct: 215 FPMFLVYFISGVAETNRAPFDVAEGESEIVAGFHVDYSGMAFTVFFLAEYANMILVATLA 274

Query: 351 VIINMGG---------YNL---RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            I+ +GG         +NL     +  LK+  + F F+  R T PRYRYD+++ L  K
Sbjct: 275 SIMFLGGWLPPVDIAPFNLIPGMVWLLLKIAFMLFFFLWFRATFPRYRYDQIMRLGWK 332


>UniRef50_Q9T7K1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Crassostrea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Crassostrea gigas (Pacific oyster)
           (Crassostrea angulata)
          Length = 340

 Score = 86.6 bits (205), Expect = 3e-16
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S+S YA +GG+R  AQ ISYE+                  +                   
Sbjct: 155 SSSKYASVGGVRGFAQVISYEICLSITLVAVMFFSGSMSFFSLSDSGWSMWWGLYCAPVA 214

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILV--- 353
                   AE NR PFD  E E ELVSGFN E+  G FA +F+AEY  IL + ++ V   
Sbjct: 215 ALWVVICLAEANRAPFDLVEAESELVSGFNTEFSAGSFAGLFIAEYGMILLMCLVTVWSF 274

Query: 354 IINMGGYNL--RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
             N   + +    + + K+ + +F FI  R + PR+RYD+L+  A K +  + + ++
Sbjct: 275 FQNTCVWTVLGSVWMFTKILMFTFFFIWTRASFPRFRYDQLMMAAWKTLLPFVLGIY 331


>UniRef50_A3QRI2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Microcotyle sebastis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Microcotyle sebastis
          Length = 305

 Score = 86.6 bits (205), Expect = 3e-16
 Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+L G +R+   +IS+E                    F  +               
Sbjct: 136 SNSKYSLYGAIRASFSSISFE--GVLMCIVLSVGLYYGCYSFSVINNYEGSLSIGALTLY 193

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   +E NR+PFDF+E E +LVSGFN +Y    FA++F +EYS ++F    L    
Sbjct: 194 ICSVIGVMSECNRSPFDFSESESDLVSGFNTDYYGASFAILFASEYSIMIFFSWFLGYFF 253

Query: 363 MGG-YNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIF-TYFIKLFI 521
           MG    L FFF+      SF+ I VR   PR+RYD  +    K +F  YF+ LF+
Sbjct: 254 MGSLLGLGFFFF-----HSFILIFVRACFPRFRYDYYVNFVWKNLFIVYFLLLFV 303


>UniRef50_P24875 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=22; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Ascaris suum (Pig roundworm) (Ascaris
           lumbricoides)
          Length = 290

 Score = 86.2 bits (204), Expect = 4e-16
 Identities = 50/164 (30%), Positives = 78/164 (47%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y ++G +R+ +Q++SYE+                  + F+                
Sbjct: 125 SKSKYGMVGAIRASSQSVSYEIAFSLYLLAIVMHINMFCFFSFF--------NLSLFIVY 176

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR PFDFAEGE ELVSG+N+EY    F L+FL EY ++LF   +  ++ 
Sbjct: 177 LPFLFMVLAELNRAPFDFAEGESELVSGYNVEYSSVAFVLLFLGEYGALLFFSTLTSVLF 236

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
            G      F Y+ +  +  + + VR + PR+RYD ++Y    K+
Sbjct: 237 FG------FSYVVIYCMFTILVFVRSSYPRFRYDLMMYFFWFKL 274


>UniRef50_Q1IS40 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           2 - Acidobacteria bacterium (strain Ellin345)
          Length = 354

 Score = 85.4 bits (202), Expect = 7e-16
 Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+LLG LR+ AQ +SYEV                        Q+            
Sbjct: 153 SNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLLLSGSFSLREIVRLQQGGFWNWNIFGGF 212

Query: 183 XXXXXXXX-----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMI 347
                        AETNR PFD  E E ELV+G++ EY    FA+ F+AEY++++ +  I
Sbjct: 213 QFIAFFIYLTSAYAETNRIPFDLPEAETELVAGYHTEYSSMKFAMFFMAEYANMVTVACI 272

Query: 348 LVIINMGGYN----------LR-----FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLA 482
             I+ +GG++          L+     F+F L++    F++I VRGTLPR+RYD+L+  +
Sbjct: 273 ASILFLGGWSGPVPGFLPPILQSLVPVFWFCLRIFAFLFIYIWVRGTLPRFRYDQLMAFS 332

Query: 483 XK 488
            K
Sbjct: 333 WK 334


>UniRef50_A5UVG2 Cluster: NADH dehydrogenase; n=5; Chloroflexi
           (class)|Rep: NADH dehydrogenase - Roseiflexus sp. RS-1
          Length = 391

 Score = 66.5 bits (155), Expect(2) = 1e-15
 Identities = 39/124 (31%), Positives = 55/124 (44%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y++LGG+R+ AQ ISYE+                        Q             
Sbjct: 140 SNNKYSMLGGIRASAQVISYELALGLTVLGAVMQTQSFSTAEIVERQMQMWNIVPQFLGF 199

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE  R PFD  E E+ELV G+N EY    FAL F++EY  ++ +  I V + 
Sbjct: 200 VVFIIAATAEVVRAPFDLVEAEQELVGGYNTEYSSMKFALFFMSEYVKLVAMNAIAVTLF 259

Query: 363 MGGY 374
           +GG+
Sbjct: 260 LGGW 263



 Score = 38.3 bits (85), Expect(2) = 1e-15
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           F LK+ L+SF+ + +R TLPR RYD+L+ L  K
Sbjct: 296 FLLKVLLLSFVSVWIRATLPRVRYDQLMNLGWK 328


>UniRef50_Q37381 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=117; Eukaryota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Acanthamoeba castellanii (Amoeba)
          Length = 369

 Score = 83.8 bits (198), Expect = 2e-15
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG LRS+AQ I+YEV                        Q+            
Sbjct: 131 SNSRYAFLGALRSIAQVIAYEVVIGIIIINIIVLSGSLNFLKIVWAQKDLWYAFVLWAQF 190

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD AE E ELVSG+N+E+    FAL FL+EY++I+ +  +  I+ 
Sbjct: 191 FLFFIAMLAETNRHPFDLAEAESELVSGYNVEHSSVLFALFFLSEYANIILLCHVATILF 250

Query: 363 MGGYNL-RFFFYLKLRLISF 419
           +GG+ +   +F++K   + +
Sbjct: 251 LGGWTMPDLYFFIKFFSVEY 270


>UniRef50_Q5KUJ9 Cluster: NADH-quinone oxidoreductase subunit H;
           n=12; Firmicutes|Rep: NADH-quinone oxidoreductase
           subunit H - Geobacillus kaustophilus
          Length = 333

 Score = 83.4 bits (197), Expect = 3e-15
 Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ YALLGG+R+ AQ ISYE+                        Q+            
Sbjct: 142 SNNKYALLGGMRAAAQMISYEIPLVMSALGVVLLAGSMNLVDIVAAQKDVWFIFAQPLAF 201

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFD  E E ELV+GF++EY    +A   LAEY  +  +  ++ I+ 
Sbjct: 202 LIFLIAAVAELNRTPFDLPEAESELVAGFHVEYSGFRWAFFMLAEYVYLFAMAALVTILF 261

Query: 363 MGGYN-LRF--------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG++ + F        +F LK   + F+ I  R T PR R D+L+  A K
Sbjct: 262 LGGWHPVAFLGWIPGAVWFALKFCAVVFVLIWFRATFPRVRADQLMEFAWK 312


>UniRef50_Q9EV66 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=4; Proteobacteria|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Rhizobium meliloti (Sinorhizobium
           meliloti)
          Length = 328

 Score = 83.4 bits (197), Expect = 3e-15
 Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS YA+LG LR+ AQ ISYE+                        Q             
Sbjct: 142 ANSKYAVLGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLLDIVRAQTDVWNVVYQPIGF 201

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE  R PFD AE E +L +GF+ EY    FAL  ++EY  ++ + ++ VI+ 
Sbjct: 202 FVFFVAGLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFALFMVSEYVVMVLVSVLTVILF 261

Query: 363 MGGYN-------LRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            GG+N          +F LK+    +LF+  R T PRYRYD+L+ +  K
Sbjct: 262 FGGWNGVLIPLPPLLWFLLKVAFFVYLFMWFRFTFPRYRYDQLMAIGWK 310


>UniRef50_P24887 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=24; Chromadorea|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Caenorhabditis elegans
          Length = 291

 Score = 82.6 bits (195), Expect = 5e-15
 Identities = 51/164 (31%), Positives = 78/164 (47%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y ++G +R+ +Q+ISYE+                      ++              
Sbjct: 125 SKSKYGMIGAIRASSQSISYEIAFSLYVLCIIIHNN--------VFNFVSKFNLSLLIIY 176

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR PFDF+EGERELV GFN+E+ R  F L+FL+EY S++F  ++     
Sbjct: 177 IPFLIMVIAELNRAPFDFSEGERELVRGFNVEFARVAFVLLFLSEYGSLIFFSVL----- 231

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
                 +F  ++   + S L I +R + PRYRYD ++ L   K+
Sbjct: 232 SSAMFFKFSIFMAFSIFS-LLIFIRSSYPRYRYDLMMSLFWFKL 274


>UniRef50_Q3ZXR7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=5; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Dehalococcoides sp. (strain CBDB1)
          Length = 353

 Score = 82.2 bits (194), Expect = 7e-15
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+LLG +R++AQ +SYE+                        Q+            
Sbjct: 131 SNNKYSLLGAMRTIAQEVSYEIPLVLSILGVVMLTGSLSMNEIVKAQDVPFILLQPLGFF 190

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFD  E E E+++GF+ EY    F L +L EY+ +L +  I   + 
Sbjct: 191 VYLSAAM-AEVNRTPFDLLEAESEIIAGFHTEYSGMKFGLFYLMEYAEVLAVSAIATTLF 249

Query: 363 MGGY-----NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG+     +  F+F  K+ L+    I VR TLPR R D+++    K
Sbjct: 250 LGGWQGPLLHPVFWFIAKILLVFMFIIWVRATLPRLRIDQVMAFGWK 296


>UniRef50_Q81K04 Cluster: NADH-quinone oxidoreductase subunit H;
           n=10; Bacillus cereus group|Rep: NADH-quinone
           oxidoreductase subunit H - Bacillus anthracis
          Length = 333

 Score = 80.6 bits (190), Expect = 2e-14
 Identities = 56/171 (32%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+LLGG+R+ AQ ISYE+                        QE            
Sbjct: 142 SNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVLLAGSLNLNEIVAAQENVWYIFVQPIGF 201

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NRTPFD  E E ELVSG++ EY    +A   L+EY     +  ++ ++ 
Sbjct: 202 VVFLIAAVAELNRTPFDLPEAESELVSGYHTEYSGFRWAFFMLSEYVYFFGMASLITVLF 261

Query: 363 MGGYN----LRF-----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG+N    L F     +F LK   + FL I  R T PR R D+L+    K
Sbjct: 262 LGGWNPVMFLGFIPGAVWFALKFSSVVFLLIWFRVTFPRIRGDQLMEFGWK 312


>UniRef50_Q6N1Z4 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=12; Bacteria|Rep: NADH-quinone oxidoreductase subunit
           H 2 - Rhodopseudomonas palustris
          Length = 319

 Score = 80.6 bits (190), Expect = 2e-14
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ ++LLGG+R+ AQ ++YEV                        Q             
Sbjct: 130 SNNRFSLLGGMRAAAQMLAYEVFLGLSLMGVVMIAGSFSMAEIVEAQRGVWFVVLQPLGM 189

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   A  +R PFD  E E +L++GF  EY    F L FL EY ++L +  + V + 
Sbjct: 190 ALFTIAGIAAAHRLPFDLPESENDLIAGFITEYTGMSFGLFFLGEYLAVLLVSALAVTLF 249

Query: 363 MGGYNLRF-----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            GG+   +     +F LK  +I+  F+ +R TLPR RYD+L+  A K
Sbjct: 250 FGGWLGPWLPGPVWFGLKTAVIAVAFVWIRATLPRPRYDQLLSFAWK 296


>UniRef50_Q9B8A1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Trichinella spiralis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Trichinella spiralis (Trichina
           worm)
          Length = 299

 Score = 80.2 bits (189), Expect = 3e-14
 Identities = 60/177 (33%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV----RXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXX 170
           SNS YA  G LRS++Q+ISYEV                        FY ++         
Sbjct: 125 SNSKYATYGSLRSMSQSISYEVCLSTTLLMIMMLKDSYNLATTKTGFYYFEPTITLALTI 184

Query: 171 XXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AETNR+PFD AE E ELVSGFNIE+    FA +F+AEY  I+ +  + 
Sbjct: 185 PATIMIL-----AETNRSPFDLAEAESELVSGFNIEFSSVEFAFLFMAEYGMIILLSTLF 239

Query: 351 VIINMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
             + +   +      L L LIS + +  R T PR RYD L+ L  K +    I + +
Sbjct: 240 STLLLPWCSP----LLTLLLISSIIM-SRSTFPRIRYDTLMSLMWKSLLPVMISMLM 291


>UniRef50_Q8WF33 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Venerupis (Ruditapes) philippinarum|Rep:
           NADH-ubiquinone oxidoreductase chain 1 - Venerupis
           (Ruditapes) philippinarum
          Length = 309

 Score = 80.2 bits (189), Expect = 3e-14
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
 Frame = +3

Query: 6   NSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXX 185
           +S Y  LG +R++AQ++SYEV                                       
Sbjct: 121 DSRYGFLGAMRAIAQSVSYEVFLSTCLFCPLILTGSYD--LIESRCSPFSSVFIGFEVLV 178

Query: 186 XXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINM 365
                  AETNR PFDF EGE ELV+G+ +E+    FAL+ LAEYS++ F+ M+  ++  
Sbjct: 179 LWVICILAETNRPPFDFVEGESELVAGYMVEFGGVNFALLALAEYSNMAFMSMLSGVLFF 238

Query: 366 GGY-------NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
                     NL F FY+      +  I VRG +PR+RYD L+ L  K +    + +F+
Sbjct: 239 SFSMNLPLLGNLLFSFYMV--FFMYFMIWVRGLVPRFRYDLLMELCWKVLLPLTLCVFM 295


>UniRef50_Q5DKX5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Pseudococcidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 306

 Score = 80.2 bits (189), Expect = 3e-14
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF 389
           E NR PFDF E E EL+SG N+E+    F   FL EY  ++F  +I +I  +  + +  +
Sbjct: 191 ELNRIPFDFLESESELISGMNLEFSSLNFMFFFLIEYLDLIFFSLITLINFLNIFIMYMY 250

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIF 497
            Y+ L L+  LF+  RG + RYR DKL  L  K IF
Sbjct: 251 MYIILILVLLLFLFFRGFIIRYRMDKLFILLWKVIF 286


>UniRef50_Q5YWD4 Cluster: NADH-quinone oxidoreductase subunits H/I;
           n=65; Bacteria|Rep: NADH-quinone oxidoreductase subunits
           H/I - Nocardia farcinica
          Length = 597

 Score = 77.4 bits (182), Expect = 2e-13
 Identities = 57/175 (32%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y LLGGLRS AQ ISYE+                        Q             
Sbjct: 147 SGSTYPLLGGLRSTAQVISYEIAMALCFAAVFLHAGTMATSGIVGAQHPTWFVFLLLPSF 206

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    ETNR PFD  E E ELV GF+ EY    FA+  LAEY ++  +  +   + 
Sbjct: 207 LIYCVSMVGETNRAPFDLPEAEGELVGGFHTEYSSLKFAMFMLAEYVNMGTVSALATTLF 266

Query: 363 MGG------YNL----------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYL 479
           +GG      +NL            +F  K+    F+F+ +RGTLPR RYD+ + L
Sbjct: 267 LGGWSAPWPFNLIPGADAGWWGLLWFTAKVWTFMFVFVWLRGTLPRLRYDQFMRL 321


>UniRef50_A3THI6 Cluster: NADH dehydrogenase subunit H; n=2;
           cellular organisms|Rep: NADH dehydrogenase subunit H -
           Janibacter sp. HTCC2649
          Length = 487

 Score = 77.0 bits (181), Expect = 2e-13
 Identities = 55/180 (30%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y L+GGLRS AQ ISYE+                        Q             
Sbjct: 184 SGSPYPLMGGLRSSAQMISYEIAMGLSLVAVFLYSGSMSTSQIVSSQHSIWYIIPAFFSF 243

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    ETNR PFD AEGE EL  GF+ EY    FA+ FL EY ++  +  +   + 
Sbjct: 244 FVYVITMVGETNRLPFDLAEGEGELTGGFHTEYGSMRFAMFFLGEYINMFTVSALATTMF 303

Query: 363 MGGYNL------------------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GG+                      +F  KL +  F F+ +RG+LPR RYD+ +    K
Sbjct: 304 LGGWQAPPGIAAINDGMFNEGWWGLLWFTAKLWMFMFFFVWLRGSLPRTRYDQFMRFGWK 363


>UniRef50_Q5W905 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Lingula anatina|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Lingula unguis
          Length = 318

 Score = 77.0 bits (181), Expect = 2e-13
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+L+  +RS+AQ ISYEV                         +            
Sbjct: 133 SNSKYSLMASVRSLAQAISYEVVLGLLLVFPLLFTHSLEMSSVAAPTQSIWVALAFPPLF 192

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR+PFD  E E ELVSG+N+EY    FAL F++EYS++L   ++   + 
Sbjct: 193 GMWLACILAETNRSPFDLVEAESELVSGYNVEYSGLHFALFFMSEYSNMLLFSVVTTSLY 252

Query: 363 MGGYNL-------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
           +    L         +F  K   +S   +  R   PR R+D+L+
Sbjct: 253 LNDGFLFTNPALQEAYFMTKAFFVSIFILFCRAVFPRIRFDQLM 296


>UniRef50_Q950Q6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Chytridiomycota|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Spizellomyces punctatus
          Length = 301

 Score = 77.0 bits (181), Expect = 2e-13
 Identities = 56/169 (33%), Positives = 70/169 (41%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS Y  LG LRS AQ ISY V                        Q+            
Sbjct: 124 ANSKYPFLGSLRSTAQMISYSVSLSLILLTVIFTLGTVNLLDILAAQQPVSLFYPLLPMA 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD  E E ELV+GF  E+    FA  FL EY+SIL I  +  I+ 
Sbjct: 184 ILFMISAVAETNRAPFDLPEAESELVAGFFTEHSAVSFAYFFLGEYTSILVICTLFFIL- 242

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFI 509
                  FF       + F FI +R +L R R+D+L+ L    I  + I
Sbjct: 243 -------FFGVSAALPMIFFFIWLRASLARLRFDQLLRLGWAHILPFTI 284


>UniRef50_Q9B8G7 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Heterodoxus macropus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Heterodoxus macropus (wallaby
           louse)
          Length = 297

 Score = 75.4 bits (177), Expect = 8e-13
 Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YA LG LR+V+Q+ISYE+                  Y+   +              
Sbjct: 124 SNSKYAYLGSLRAVSQSISYEILMSMLFIALMMTTKGMSIYYILKFDPLVFFLFPFFIAY 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE NR+PFD +EGE ELV+G+ +EY    + +IFL+E   I+F         
Sbjct: 184 LFIGL---AELNRSPFDLSEGESELVAGYTVEYGGIMYTMIFLSENIMIMF------FCY 234

Query: 363 MGGYNLRFFFYLK-------LRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           MG     FFFY+          ++ +L   +RG LPR RYD L+    K
Sbjct: 235 MGSL---FFFYINSTMSIIFSMMMIYLVCLIRGILPRIRYDHLMMFCWK 280


>UniRef50_P19040 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Artemia salina|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Artemia salina (Brine shrimp)
          Length = 130

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRG--GFALIFL--AEYSSILFIRMILVIINMGGY 374
           AETNRTPFD AEGE ++  GFN EY     GFALI L  +EY+SILF+ +          
Sbjct: 2   AETNRTPFDLAEGECQVSVGFNTEYMHSSVGFALIMLSESEYASILFMSL---------- 51

Query: 375 NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKL 515
                F +   L+ + ++  RG+ PRYRYD L++L  K  FTY   +
Sbjct: 52  -----FSVMFCLVVYSYLWSRGSYPRYRYDNLMHLCWKTSFTYIFNI 93


>UniRef50_Q6ANM8 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Deltaproteobacteria|Rep: NADH-quinone
           oxidoreductase subunit H - Desulfotalea psychrophila
          Length = 333

 Score = 74.5 bits (175), Expect = 1e-12
 Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AETNR PFD  E E ELV+GF+ EY   GF L F+ EY++I+    +  ++ +GG++  F
Sbjct: 211 AETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMGEYANIVIGACLTTLLFLGGWDCPF 270

Query: 387 -------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                  +F +K+ ++ F FI +R T PR     L+ L+ K
Sbjct: 271 GLFPGVWWFLIKIYILIFTFIWIRWTFPRTTIYGLLNLSWK 311


>UniRef50_P08774 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=60; Fungi|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Neurospora crassa
          Length = 371

 Score = 74.5 bits (175), Expect = 1e-12
 Identities = 53/145 (36%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           +NS YA LG LRS AQ ISYE+                        Q             
Sbjct: 132 ANSKYAFLGSLRSAAQLISYELVLSSAILLVIMLTGSFNLGVNTESQRAVLFVLPLLPIF 191

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD AE E ELVSGF  E+    F   FLAEY SI+ + ++  I+ 
Sbjct: 192 IIFFIGSIAETNRAPFDLAEAESELVSGFMTEHAAVVFVFFFLAEYGSIVLMCILTSILF 251

Query: 363 MGGY---NLRFFFYLKLRLISFLFI 428
           +GGY   NL+  F +   + S LFI
Sbjct: 252 LGGYLFINLKDVFNILDFVYSNLFI 276


>UniRef50_A2D6E8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=8; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Gyrodactylus salaris (Flatworm)
          Length = 295

 Score = 74.1 bits (174), Expect = 2e-12
 Identities = 52/162 (32%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+L G LRS    +SYE+                  Y  Y                
Sbjct: 124 SNNKYSLYGSLRSSFGAVSYEMSFMCFLLTIGSVLGFYSLYDSYFSYSVYSSILLLWPIY 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    ETNR PFDFAE E +LVSGFN E+    F  +F  EY         L++  
Sbjct: 184 LIFILCSLCETNRVPFDFAESESDLVSGFNTEFCNLHFVCLFACEY---------LIVFI 234

Query: 363 MGGYNLRFFF-----YLKLRLISFLFI*VRGTLPRYRYDKLI 473
           MG ++  +FF     Y+ L    F F+  RGTLPR  Y+  I
Sbjct: 235 MGWFSSIYFFTGALYYVMLMATIFFFLWSRGTLPRVYYNTFI 276


>UniRef50_Q4FU58 Cluster: NADH-quinone oxidoreductase subunit H;
           n=74; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Psychrobacter arcticum
          Length = 347

 Score = 74.1 bits (174), Expect = 2e-12
 Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S + ++LLGGLRS AQTISYEV                        Q             
Sbjct: 151 SANKFSLLGGLRSAAQTISYEVFLGLSLMGVVALTGSFNLRAIVEAQADGWYIIPQFFGF 210

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   A T+R PFD  E E+EL  G+++EY    F + F+ EY +++ I  ++  + 
Sbjct: 211 LTFVVAGVAVTHRHPFDQPEAEQELAEGYHVEYSGMKFGMFFIGEYVNVVLISALMTCLF 270

Query: 363 MGG----YNL-------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            GG    +NL        F+F +K      +FI  RG+L R RYD+++    K
Sbjct: 271 FGGWLAPFNLDIPFIPPAFWFMIKTLFFMTMFILARGSLMRPRYDQVMNFGWK 323


>UniRef50_A0RMD5 Cluster: NAD(P)H-quinone oxidoreductase chain 1
           (NAD(P)Hdehydrogenase I, chain 1); n=1; Campylobacter
           fetus subsp. fetus 82-40|Rep: NAD(P)H-quinone
           oxidoreductase chain 1 (NAD(P)Hdehydrogenase I, chain 1)
           - Campylobacter fetus subsp. fetus (strain 82-40)
          Length = 425

 Score = 73.7 bits (173), Expect = 2e-12
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+LLG LR+ +  ISYE+                    F L Q+            
Sbjct: 145 SNNKYSLLGSLRAASGAISYEIPLGLAVVSMILTYDSINLNDFVLQQQGSFLGLPSWGIF 204

Query: 183 XXXXXXXX------AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRM 344
                         AETNR PFD AEGE E+V+G+++EY    FA+ F+AEY ++  +  
Sbjct: 205 IQPLAAIIFIICAFAETNRAPFDLAEGESEIVAGYHLEYSAMSFAMFFMAEYIAMTAMSA 264

Query: 345 ILVIINMGGYNLRF 386
           +++ I  GGY+L +
Sbjct: 265 LIITIFFGGYSLPY 278



 Score = 35.1 bits (77), Expect = 0.98
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           F LK  ++ F+FI VR T+PR+RYD++  L  +K+
Sbjct: 372 FALKTFVMLFVFIWVRWTVPRFRYDQIQRLGWEKL 406


>UniRef50_Q67P15 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
           oxidoreductase subunit H 1 - Symbiobacterium
           thermophilum
          Length = 328

 Score = 72.9 bits (171), Expect = 4e-12
 Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S + Y LLG +R+ AQ ISYE+                  Y     Q             
Sbjct: 137 SQNKYGLLGSMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRNMINLFPQFLGF 196

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE   TPFD  E E ELV+G++ +Y    F L FL E +  +   ++     
Sbjct: 197 LVFYIASLAEAGWTPFDLPESETELVAGYHTDYGGMRFGLFFLTELTHAVNSAVLSTTFF 256

Query: 363 MGGYNLRF---------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +GGYN  F         +F LK+ L+ F+   ++ T PR+RYD+L+    K
Sbjct: 257 LGGYNPWFGLTMIPGFVWFLLKVILMVFVLYWIKCTFPRFRYDRLMVFGWK 307


>UniRef50_Q1K3R5 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Desulfuromonas acetoxidans DSM 684
          Length = 329

 Score = 72.5 bits (170), Expect = 5e-12
 Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+L G  RSVAQ ++YE+                        Q             
Sbjct: 137 SNNKYSLFGAFRSVAQNVAYEIPMLIALLSVVFVTNTFSLKGIVAAQSGGSWFLFFQPLA 196

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AETNR PFD  E E EL +GF+ EY    F+L  +AEY+++     I  + 
Sbjct: 197 FLIYIICMVAETNRAPFDLPEAESELTAGFHTEYSGMSFSLFMMAEYTNMFIACSIATVF 256

Query: 360 NMGG----------YNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTY 503
            +GG          Y    +F  K+  + F  + +R T PR R+D+L+    K +  +
Sbjct: 257 FLGGTSGIPLPYFEYTGIIWFLAKVYFLMFFLVWIRWTYPRTRFDQLMNFCWKYLIPF 314


>UniRef50_Q7YH66 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=302; Platyhelminthes|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Taenia asiatica (Asian
           tapeworm)
          Length = 303

 Score = 72.5 bits (170), Expect = 5e-12
 Identities = 39/88 (44%), Positives = 48/88 (54%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF 389
           ETNRTPFD+ E E ELVSGFN+EY    F  +F  EY  I     + +I+  GG    F 
Sbjct: 193 ETNRTPFDYGEAESELVSGFNVEYSGIYFTCLFACEYIIIFIFSWLGMILMFGG---GFI 249

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLI 473
             + L    F F+  R TLPR RYD  +
Sbjct: 250 GSIFLSFCLFFFMWARATLPRIRYDYFV 277


>UniRef50_A4G637 Cluster: NADH-quinone oxidoreductase subunit H;
           n=63; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Herminiimonas arsenicoxydans
          Length = 357

 Score = 72.1 bits (169), Expect = 7e-12
 Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AE NR PFD  EGE E+V+G  +EY    FA+ FLAEY++++ I M+  ++ +GG++   
Sbjct: 227 AELNRHPFDVVEGESEIVAGHMVEYSGMSFAMFFLAEYANMILISMMATLMFLGGWSSPI 286

Query: 378 --LRF-------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
             + F       +  +K   +  LFI  R + PRYRYD+++ L  K
Sbjct: 287 DAMPFTWIPGWIWLGIKTLFVVTLFIWFRASFPRYRYDQIMRLGWK 332



 Score = 33.1 bits (72), Expect = 4.0
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YA LG +R+ AQ ISYE+
Sbjct: 148 SNSKYAFLGAMRASAQMISYEI 169


>UniRef50_Q9B8Z5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=11; Schistosomatidae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Schistosoma japonicum (Blood
           fluke)
          Length = 296

 Score = 71.7 bits (168), Expect = 9e-12
 Identities = 41/94 (43%), Positives = 50/94 (53%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AE+NR+PFD+ E E ELVSG N EY    F +IF  EY  +     I  I+  G Y    
Sbjct: 188 AESNRSPFDYGESESELVSGLNTEYSGLSFIVIFAFEYVMMFISSWITSIVFYGSYIGLI 247

Query: 387 FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            F+L      FLFI  RGT PR RYD  + +  K
Sbjct: 248 IFHL------FLFIWARGTFPRVRYDYYVAVVWK 275


>UniRef50_Q8KEB9 Cluster: NADH-quinone oxidoreductase subunit H;
           n=10; Chlorobiaceae|Rep: NADH-quinone oxidoreductase
           subunit H - Chlorobium tepidum
          Length = 359

 Score = 71.7 bits (168), Expect = 9e-12
 Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ +AL G +RSVAQ +SYE+                      L Q             
Sbjct: 150 SNNKWALYGAVRSVAQIVSYEIPASIALLCAAMLAGTLSMQQIILMQAGPNGFLHWFLFT 209

Query: 183 XXXXXXXX--------AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFI 338
                           AETNR PFD  E E ELV+G+  EY    FA+IFLAEY S+  +
Sbjct: 210 NPIAWLPFLIYFISSLAETNRAPFDIPEAESELVAGYFTEYSGMKFAVIFLAEYGSMFMV 269

Query: 339 RMILVII----------NMGGYNLRFF--------FYLKLRLISFLFI*V--RGTLPRYR 458
             I+ I           N+GG  L           F++ ++   F+F+ +  R TLPR R
Sbjct: 270 SAIISIAFLGGWTSPLPNIGGLELNTMTSGPVWGAFWIIMKGFFFIFVQMWLRWTLPRLR 329

Query: 459 YDKLIYLAXKKIFTYFIKLFI 521
            D+L+YL  K +  + +  F+
Sbjct: 330 VDQLMYLCWKVLTPFSLVSFV 350


>UniRef50_Q2RYV5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Sphingobacteriales genera incertae sedis|Rep:
           NADH-quinone oxidoreductase subunit H - Salinibacter
           ruber (strain DSM 13855)
          Length = 345

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 58/190 (30%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS ++LLGGLRS AQ +SYE+                       +Q             
Sbjct: 131 SNSKFSLLGGLRSAAQMVSYELSMGLAVISVVLIAGSLNFMEIVEHQSSGGALLGWNAVR 190

Query: 183 XXXXXXXX-----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMI 347
                        AETNR PFD  E E ELV+G++ EY    F + FLAEY +       
Sbjct: 191 NPIGCLIFIVTAFAETNRAPFDLPEAEEELVAGYHTEYSGMKFGMFFLAEYVNWFIASFF 250

Query: 348 LVIINMGGY----------------------NLRFF-FYLKLRLISFLFI*VRGTLPRYR 458
           +V +  GGY                       L+F    LK+   SF+FI VR T PR++
Sbjct: 251 IVTLFFGGYLVPLEPQLIALFPALEGSTLLALLQFVSLMLKVSFFSFVFIWVRWTFPRFK 310

Query: 459 YDKLIYLAXK 488
           Y++L+ +  K
Sbjct: 311 YNQLMKVGWK 320


>UniRef50_A6H1Q6 Cluster: NADH-quinone oxidoreductase subunit H;
           n=4; Bacteroidetes|Rep: NADH-quinone oxidoreductase
           subunit H - Flavobacterium psychrophilum (strain
           JIP02/86 / ATCC 49511)
          Length = 343

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ ++L+G +R+ +Q +SYEV                        Q             
Sbjct: 141 SNNKFSLMGAVRAASQMVSYEVAMGLSMIALLMMTGTLSLKEISAQQSGMNWNVFYQPVS 200

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AETNRTPFD AE E EL+ G++ EY          AEY+++     IL I+
Sbjct: 201 FLIFLICAFAETNRTPFDLAECESELIGGYHTEYSSMKMGFYLFAEYANMFISSAILAIL 260

Query: 360 NMGGY-----------------NLRFFFYLKLRLISFLF--I*VRGTLPRYRYDKLIYLA 482
             GGY                 N+  F  L +++  F+F  + VR T+PR+RYD+L++L 
Sbjct: 261 FFGGYNYPGMQWMVENVGVNTANILGFLALFIKICGFIFFYMWVRWTIPRFRYDQLMHLG 320

Query: 483 XK 488
            +
Sbjct: 321 WR 322


>UniRef50_Q9RU94 Cluster: NADH-quinone oxidoreductase subunit H;
           n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit H
           - Deinococcus radiodurans
          Length = 397

 Score = 70.5 bits (165), Expect = 2e-11
 Identities = 58/181 (32%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y +LG LRS AQ ISYE+                       +Q             
Sbjct: 141 SGSKYPMLGSLRSSAQMISYELGMGLSVLGLLMLVGSTNFLDIVEWQAGPRGHGWLILFQ 200

Query: 183 XXXXXXXX----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AE NRTPFD  E E+ELV+G+  EY    +AL  +AEY +I+    ++
Sbjct: 201 VFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYVNIMTASALM 260

Query: 351 VIINMGGYNLRFF---------------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAX 485
             +  GGY    F                  K+    FLFI VR TLPR RYD+L+ L  
Sbjct: 261 STLFFGGYRGPTFLEPLIPGISSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGW 320

Query: 486 K 488
           K
Sbjct: 321 K 321


>UniRef50_A6QCF5 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
           Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
           chain H - Sulfurovum sp. (strain NBC37-1)
          Length = 343

 Score = 69.3 bits (162), Expect = 5e-11
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNL-- 380
           AETNRTPFD  E E E+VSG+  EY    + + F+ EY++++ I +I  ++ +GGY+   
Sbjct: 227 AETNRTPFDLLEHEAEVVSGYATEYSGMRWGMFFIGEYANMITISIIAAVVFLGGYSEVG 286

Query: 381 --RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                  LK+    FL + VR   P  R D+L++L  K
Sbjct: 287 IGWLTIILKVGFFFFLMLWVRAAWPHVRPDQLMWLCWK 324


>UniRef50_Q9T9L2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Dicyema misakiense|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Dicyema misakiense
          Length = 271

 Score = 69.3 bits (162), Expect = 5e-11
 Identities = 50/164 (30%), Positives = 74/164 (45%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S+Y +L  LR VAQ+ISYEV                  +                   
Sbjct: 102 SYSSYPVLASLRIVAQSISYEVVLYLIFIPLVVLSVSWSGF-----APTYSCGIYCVSFV 156

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   +E +RTPFDFAEGE ELVSG+N E+    F L+FLAEY ++L + ++L ++ 
Sbjct: 157 FLGVIVGLSEMHRTPFDFAEGESELVSGYNTEFSSVSFTLLFLAEYLALLVMCVLLSVVM 216

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
              +     F      + F+++       R RYD+L+ L  K +
Sbjct: 217 FACWWWSVVFMWVCLSVRFVYV-------RLRYDQLMQLLWKNL 253


>UniRef50_Q9A6Y1 Cluster: NADH-quinone oxidoreductase subunit H;
           n=194; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Caulobacter crescentus
           (Caulobacter vibrioides)
          Length = 356

 Score = 69.3 bits (162), Expect = 5e-11
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AETNR PFD  E E ELV+G+ +EY    + L  +AEYS+I+ +  ++ ++  GG+N   
Sbjct: 221 AETNRPPFDLPEAESELVAGYQVEYSSTPYLLFMVAEYSNIVLMCAMISVLFFGGWNPGF 280

Query: 378 ----------------LRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                           L   FY K+    F+F   +  +PRYRYD+L+ L  K
Sbjct: 281 PTDFLSSWHPFAANLFLALVFYAKICFWFFMFAMAKAIVPRYRYDQLMRLGWK 333



 Score = 33.9 bits (74), Expect = 2.3
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS Y  LG LRS AQ +SYEV
Sbjct: 139 SNSKYPFLGALRSAAQMVSYEV 160


>UniRef50_P42032 Cluster: NADH-quinone oxidoreductase subunit H;
           n=6; Rhodobacterales|Rep: NADH-quinone oxidoreductase
           subunit H - Rhodobacter capsulatus (Rhodopseudomonas
           capsulata)
          Length = 345

 Score = 68.9 bits (161), Expect = 7e-11
 Identities = 51/175 (29%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y  LG LRS AQ ISYEV                        Q             
Sbjct: 138 SNSKYPFLGSLRSAAQMISYEVSMGLIIVGVIISTGSMNLSAIVEAQRGDFGLLNWYWLP 197

Query: 183 XXXXXXXX-----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMI 347
                        AETNR PFD  E E ELV+GF +EY    + L    EY ++  +  +
Sbjct: 198 HLPMVALFFISALAETNRPPFDLPEAESELVAGFMVEYSSTPYLLFMAGEYIAVWLMCAL 257

Query: 348 LVIINMGGY--------NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
             ++  GG+        +   +   K+  + F+F  V+  +PRYRYD+L+ +  K
Sbjct: 258 TSVLFFGGWLSPIPGVPDGVLWMVAKMAAVFFVFAMVKAIVPRYRYDQLMRIGWK 312


>UniRef50_Q6A6G5 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Propionibacterium acnes|Rep: NADH-quinone
           oxidoreductase subunit H - Propionibacterium acnes
          Length = 440

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 16/109 (14%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN---- 377
           E+NR PFD  E E ELVSG+  EY    + + FLAEY ++  +  +   + +GGY     
Sbjct: 229 ESNRLPFDLPECESELVSGYITEYSGFPYGMYFLAEYINMATLSAVCTTLFLGGYRAPWP 288

Query: 378 LRFF------------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           L +F            F+LK +L+ F F+ VR  +PR+RYD  + L  K
Sbjct: 289 LNYFGVIDSGWWGLLWFFLKTQLVIFFFVWVRAAIPRFRYDHFMDLGWK 337


>UniRef50_Q6G395 Cluster: NADH-quinone oxidoreductase subunit H;
           n=22; cellular organisms|Rep: NADH-quinone
           oxidoreductase subunit H - Bartonella henselae
           (Rochalimaea henselae)
          Length = 349

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AETNR PFD  E E ELV+G  +EY    + L FL EY +I+ +  +  I+ +GG+    
Sbjct: 221 AETNRPPFDLVEAESELVAGHMVEYSSTPYMLFFLGEYVAIVLMCALTTILFLGGWLPPL 280

Query: 378 ----LRF-----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
               L +     +F LK+  + F F  V+  +PRYRYD+L+ L  K
Sbjct: 281 DVWWLNWVPGIIWFVLKVCFVFFWFAMVKAFVPRYRYDQLMRLGWK 326



 Score = 33.9 bits (74), Expect = 2.3
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS Y  LG LRS AQ +SYEV
Sbjct: 139 SNSKYPFLGALRSAAQMVSYEV 160


>UniRef50_UPI00015BD35D Cluster: UPI00015BD35D related cluster; n=2;
           unknown|Rep: UPI00015BD35D UniRef100 entry - unknown
          Length = 348

 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQ--EXXXXXXXXXX 176
           SNS YAL+G LR     ISYEV                  Y   + Q  +          
Sbjct: 142 SNSKYALIGALRKAGIIISYEVVITFAALGPIMLAKSLSTYDIVMAQIHQKVWYIFLQPI 201

Query: 177 XXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAE-YSSILFIRMILV 353
                     AET R PFD  E E ELV+GF +EY    F L  L E Y  +L +  IL 
Sbjct: 202 SFVVFVFALLAETGRVPFDIQEAEAELVTGFTVEYGGMKFGLFPLVEWYVEVLSLSSILT 261

Query: 354 IINMGGY---NLRF-----------------FFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
           ++ +GG+   N+ F                 +F +K+ ++  L + +  TLPRYR D++ 
Sbjct: 262 VLYLGGWSPVNIPFIGFIDPLFFLGSWSGFIWFIIKVTILFLLVLWLHWTLPRYRIDQIT 321

Query: 474 YLAXK 488
            +A K
Sbjct: 322 TIAWK 326


>UniRef50_Q1AVI7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Rubrobacter xylanophilus DSM 9941|Rep: NADH-quinone
           oxidoreductase subunit H - Rubrobacter xylanophilus
           (strain DSM 9941 / NBRC 16129)
          Length = 331

 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S SN++LLG LR   Q ISYEV                       YQ             
Sbjct: 136 SRSNFSLLGALRGAGQMISYEVPLILSLLGVAMLTGSLSMVDIVEYQAGGFWNWIIWPQL 195

Query: 183 XXXXXXXX---AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILV 353
                      AE  R PFD  EGE E+V GF IEY    +ALI  +E++S+  +  +  
Sbjct: 196 PMFLAFFVSGLAEVKRIPFDLPEGESEIVGGFMIEYSGMTWALIQASEFASMAVMSAVAS 255

Query: 354 IINMGGY-------NLRFFFYL----KLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            + +GG+       +L  F +L    K  L+ F+F  +R TLPR R D+L+ L  K
Sbjct: 256 TLFLGGWQPPLPFLDLGVFNWLWLGIKTTLLIFVFQWIRWTLPRLRMDQLMDLGWK 311


>UniRef50_Q9B893 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=30; Schistosoma|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Schistosoma malayensis
          Length = 297

 Score = 66.5 bits (155), Expect = 3e-10
 Identities = 39/94 (41%), Positives = 48/94 (51%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           +E+NR PFD+ E E ELVSG N EY    F +I+  E   I  I  +  +I  G      
Sbjct: 190 SESNRAPFDYGESESELVSGSNTEYSGVPFMIIYACESIMIYIISWLTSVIFWGNMISLI 249

Query: 387 FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
            F+L      FLFI  RGT PR RYD  + L  K
Sbjct: 250 IFHL------FLFIWARGTFPRVRYDYYVVLIWK 277


>UniRef50_A1Z3A0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Romanomermis|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Romanomermis nielseni
          Length = 305

 Score = 66.1 bits (154), Expect = 5e-10
 Identities = 38/100 (38%), Positives = 55/100 (55%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF 389
           E  R+P D +EGE ELVSG+N+E     F  +FL EY++++F+ M++  I    Y +  F
Sbjct: 184 ECQRSPMDLSEGESELVSGYNVELSSITFIFVFLGEYNTMIFMMMVMWFIY---YTMSLF 240

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFI 509
           F   L +   L + +R   PR RYD L+ L   KI    I
Sbjct: 241 F---LFISLSLMLLIRSCFPRIRYDFLMSLFWFKILPLII 277


>UniRef50_A7CUF6 Cluster: NADH dehydrogenase; n=1; Opitutaceae
           bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
           bacterium TAV2
          Length = 400

 Score = 50.8 bits (116), Expect(2) = 7e-10
 Identities = 24/57 (42%), Positives = 35/57 (61%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN 377
           AETNR PFD  E E +LV+ F  EY    ++L ++AEY  +L    + V++  GG+N
Sbjct: 259 AETNRQPFDTIESEADLVNSFASEYGAYKWSLFYVAEYCHMLVGSAVFVLLFFGGWN 315



 Score = 34.7 bits (76), Expect(2) = 7e-10
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +3

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           F  K+  + F F+ VR TLPR+RYD+++ +  KK+
Sbjct: 347 FVGKVLFMIFFFMWVRWTLPRFRYDQVMNIGWKKL 381


>UniRef50_Q11RU2 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=2; Flexibacteraceae|Rep: NADH-quinone oxidoreductase
           subunit H 2 - Cytophaga hutchinsonii (strain ATCC 33406
           / NCIMB 9469)
          Length = 365

 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 39/103 (37%), Positives = 55/103 (53%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AE NR PFD  EGE ELVSGF+ EY    FA++FLAEY+ +L +  + V++  G +N   
Sbjct: 223 AECNRAPFDIPEGESELVSGFHTEYTGFRFAILFLAEYAMMLLVAFLGVVLFFGSWNTAL 282

Query: 387 FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKL 515
                L    +      GT+  Y +  L +L  K I   F++L
Sbjct: 283 PNIGSLHFADWT-SGTPGTIAGYAWG-LFWLISKGITVVFLQL 323


>UniRef50_Q6TY88 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Xiphinema americanum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Xiphinema americanum
          Length = 289

 Score = 64.1 bits (149), Expect = 2e-09
 Identities = 39/102 (38%), Positives = 52/102 (50%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF 389
           E+NR PFD  EGE EL+SGFNIE     F L+FL+EY  +  + M++ I    G +    
Sbjct: 187 ESNRAPFDLLEGESELISGFNIEMSSVLFVLVFLSEYGILFCLGMLVSIPFSEGLSGTAL 246

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKL 515
           F       SF+   VR   PR RYD L+ L  +      + L
Sbjct: 247 F-----CTSFMLF-VRSCFPRVRYDSLMVLMWQAFLPVVVML 282


>UniRef50_Q1HBB1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Strelkovimermis spiculatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Strelkovimermis spiculatus
          Length = 288

 Score = 64.1 bits (149), Expect = 2e-09
 Identities = 51/173 (29%), Positives = 74/173 (42%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S ++ LG +R++AQTIS EV                  Y    Y +            
Sbjct: 119 SLSKFSFLGSMRALAQTISLEV---LFSMLMFLGFSLMSKYNTTYYNQSNNLVQVTLTFY 175

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E +R P D +E E ELVSG+N E+    F +IFL+EYS+++    + + + 
Sbjct: 176 FFITILI--EAHRAPMDLSESESELVSGYNTEFSSVTFVMIFLSEYSNMIMFMGLAMFL- 232

Query: 363 MGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
              +  +   Y  + L   L   VR   PR RYD L+ L  K +F   I L I
Sbjct: 233 ---WLKQLILYWLVLLTCILM--VRSCYPRIRYDHLMNLCWKNMFFSLIMLMI 280


>UniRef50_P48901 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=3; Saccharomycetales|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Pichia canadensis (Yeast)
           (Hansenula wingei)
          Length = 351

 Score = 63.3 bits (147), Expect = 3e-09
 Identities = 40/124 (32%), Positives = 53/124 (42%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS + LL  +RS AQ ISYE+                    F   Q+            
Sbjct: 128 SNSKFTLLASIRSTAQLISYELILTTNIIICILLNNTLNLNSFIDNQQTIWLILPLLPIG 187

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AET+R PFD  E E ELVSG   E     F L +L EY++I+ +  + +I+ 
Sbjct: 188 IIHYIARIAETSRPPFDNVEAESELVSGHMTELSASPFVLFYLQEYNNIVIMCFLNIILF 247

Query: 363 MGGY 374
            GGY
Sbjct: 248 FGGY 251


>UniRef50_Q2HJL2 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Campanulotes bidentatus compar|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Campanulotes bidentatus compar
           (small pigeon louse)
          Length = 299

 Score = 62.5 bits (145), Expect = 6e-09
 Identities = 48/142 (33%), Positives = 61/142 (42%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S+S YA +G  R++AQ+ISYEV                        QE            
Sbjct: 128 SSSKYANIGCARALAQSISYEVGLTLSIIFFCLFFSCISLSEILEVQEFFFFFPFSFLFV 187

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AETNR PFD AEGE EL  GF ++       LIFL E  S+LF+ ++L +  
Sbjct: 188 FMWSIFF-AETNRPPFDLAEGESELKKGFCVKKGEMSNPLIFLGENLSVLFVSILLKVFF 246

Query: 363 MGGYNLRFFFYLKLRLISFLFI 428
             G    FFF L      FLF+
Sbjct: 247 FSG---SFFFLLLWGGFLFLFV 265


>UniRef50_P05513 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=16; Oligohymenophorea|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Paramecium tetraurelia
          Length = 261

 Score = 62.5 bits (145), Expect = 6e-09
 Identities = 35/126 (27%), Positives = 53/126 (42%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S + Y+++ GLR+    ++ E+                    F +YQE            
Sbjct: 124 SKNKYSVMAGLRAAILMLNLEIFLGIVFLNVCFLVESFSFAAFAVYQEIFWLIFLFFFLL 183

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E NRTPFD AE E ELV+G+  EY    FAL +L EY  + F   ++ ++ 
Sbjct: 184 SNILLVFLLEVNRTPFDLAEAESELVTGYTTEYGGFYFALFYLGEYFHLFFFSCLISVVF 243

Query: 363 MGGYNL 380
            G + L
Sbjct: 244 FGSWEL 249


>UniRef50_Q6MGN3 Cluster: NADH-quinone oxidoreductase subunit H;
           n=1; Bdellovibrio bacteriovorus|Rep: NADH-quinone
           oxidoreductase subunit H - Bdellovibrio bacteriovorus
          Length = 385

 Score = 62.1 bits (144), Expect = 7e-09
 Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 30/129 (23%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AE+NR PFD AEGE ELV GF+ EY    F + F+ EY  ++    ++V+   GGY + +
Sbjct: 240 AESNRLPFDLAEGESELVGGFHTEYGGFKFNMFFIGEYGHMMIASGLMVLFFFGGYTIPY 299

Query: 387 FFYLKLR------------------LISFL------------FI*VRGTLPRYRYDKLIY 476
               +L                   LI FL            FI VR TLPR+RYD+L+ 
Sbjct: 300 VSVAELNEWAAGVASTAGKASALVALIHFLVFNIKFGFFMWVFIWVRWTLPRFRYDQLMD 359

Query: 477 LAXKKIFTY 503
           L  K +  +
Sbjct: 360 LGWKTMLPW 368


>UniRef50_Q60IJ1 Cluster: Putative uncharacterized protein CBG24965;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG24965 - Caenorhabditis
           briggsae
          Length = 312

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           AE NR PFDF+EGE ELVSG+N+E+    F L+FL ++S +    +  ++I +     R+
Sbjct: 124 AELNRAPFDFSEGESELVSGYNVEFASVAFVLLFLRDFSILASFSIFSILIFIRSSYPRY 183

Query: 387 FFYLKLRLISF 419
            + L +RL  F
Sbjct: 184 RYDLMMRLFWF 194


>UniRef50_Q37165 Cluster: NAD(P)H-quinone oxidoreductase subunit 1,
           chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit
           1); n=178; cellular organisms|Rep: NAD(P)H-quinone
           oxidoreductase subunit 1, chloroplast (EC 1.6.5.-)
           (NAD(P)H dehydrogenase subunit 1) - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 360

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 51/188 (27%), Positives = 74/188 (39%), Gaps = 26/188 (13%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+ LGGLR+ AQ+ISYE+                        Q             
Sbjct: 152 SNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQ 211

Query: 183 XXXXXXXX----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AE+ R PFD  E E EL++G+  EY    F L ++A Y ++L   + +
Sbjct: 212 PIGFIIFLISSLAESERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFV 271

Query: 351 VIINMGGYNLR----------------------FFFYLKLRLISFLFI*VRGTLPRYRYD 464
            ++ +GG+N+                       F    K  L  F+ I  R TLPR R D
Sbjct: 272 TVLYLGGWNISSPYISILELFQRDQIFATTIGIFITLAKTYLFLFVSIATRWTLPRLRMD 331

Query: 465 KLIYLAXK 488
           +L+ L  K
Sbjct: 332 QLLNLGWK 339


>UniRef50_A7CXQ4 Cluster: NADH dehydrogenase; n=1; Opitutaceae
           bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
           bacterium TAV2
          Length = 396

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AETNR PFD  E E E+++G   EY    +AL F+ EY  +  +  + V + +GG+    
Sbjct: 232 AETNRCPFDLPEAESEIIAGHLTEYSGFKYALFFMGEYFGMTALAGLGVTLFLGGWQAPC 291

Query: 378 --LRF-----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
             L+F     +F +KL     LFI  R TL R R D+L+ LA K
Sbjct: 292 EFLQFIPSYAWFGIKLIACMMLFIWARATLLRLRMDQLLKLAWK 335


>UniRef50_Q2IL15 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase
           subunit H - Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 413

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 43/134 (32%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYE------VRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXX 164
           SNS +AL GG+RS AQ ISYE      V                     + ++       
Sbjct: 152 SNSKWALFGGMRSAAQVISYEIPAGLAVMVPVLMSGTLSMQGIIRSQGAWPWEWHALTNP 211

Query: 165 XXXXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRM 344
                         AE NRTPFD  E E ELV+G+  EY    FAL FL E+ ++  +  
Sbjct: 212 FAMVAFAIFFVAQLAEGNRTPFDLPEAESELVAGYLSEYSAFRFALFFLVEFGNLWVMSA 271

Query: 345 ILVIINMGGYNLRF 386
           I V +  GG+ + F
Sbjct: 272 ISVTLFFGGWQVPF 285


>UniRef50_Q8TQP1 Cluster: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H); n=3;
           Methanosarcinales|Rep: F(420)H(2) oxidoreductase subunit
           H (F(420)H(2) dehydrogenase subunit H) - Methanosarcina
           acetivorans
          Length = 348

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y+LLG  R+ A+ + YEV                        Q             
Sbjct: 150 SNNKYSLLGAFRNFARMVGYEVPLGITVVSVAIMTGSLNIVEIASAQGLLWNIFLQPIGF 209

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   A+  R PFD  E E ELV+G+  EY    F L F AEY  ++    ++ ++ 
Sbjct: 210 IVFFIALMADMGRLPFDQNESEEELVAGWITEYTGMRFGLGFFAEYIHMILGSFLVALLF 269

Query: 363 MGGYNL---------------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
           +GG+N+                 FF LK  L+    I +R  +PR+R D+++ L+ K++
Sbjct: 270 LGGWNVPAFVANNPVLGLIAPTGFFLLKTVLVLMTIIGMRWAVPRFRIDQVVDLSWKRL 328


>UniRef50_Q3E1S2 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=2; Chloroflexus|Rep: Respiratory-chain NADH
           dehydrogenase, subunit 1 - Chloroflexus aurantiacus
           J-10-fl
          Length = 440

 Score = 47.6 bits (108), Expect(2) = 3e-08
 Identities = 23/56 (41%), Positives = 32/56 (57%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGY 374
           AE  RTPFD  E + E+V+G+  EY    F L +LA+Y     +  I  II +GG+
Sbjct: 236 AEGERTPFDIPEADSEIVAGYMTEYSGMKFGLFYLAQYVLNFLLCAITAIIFLGGW 291



 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ ++LLG +R+VAQ +SYE+
Sbjct: 150 SNNKFSLLGAMRAVAQMVSYEI 171



 Score = 32.3 bits (70), Expect(2) = 3e-08
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 384 FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           F+F LK  +  F+ + +RG LPR R D+L+    K
Sbjct: 325 FYFLLKTYIFFFVMVWLRGALPRLRIDQLMDFGWK 359


>UniRef50_Q0Z876 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Mermithidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Agamermis sp. BH-2006
          Length = 310

 Score = 59.7 bits (138), Expect = 4e-08
 Identities = 39/119 (32%), Positives = 56/119 (47%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S +NY+L+GG RS+AQ +S+E+                       Y+             
Sbjct: 138 SMNNYSLMGGSRSLAQVLSFEMLITLLVLITFVLKSSMSLKILD-YKSPMLFFFILICFS 196

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    E +R P D AEGE ELVSG+N E+    F LIFL+EYSS++ + M+  +I
Sbjct: 197 ISIIL----EAHRAPLDLAEGESELVSGYNTEFSSLYFILIFLSEYSSLILMCMLFFVI 251


>UniRef50_UPI00015BB094 Cluster: NADH dehydrogenase (quinone); n=1;
           Ignicoccus hospitalis KIN4/I|Rep: NADH dehydrogenase
           (quinone) - Ignicoccus hospitalis KIN4/I
          Length = 355

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
 Frame = +3

Query: 9   SNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXX 188
           + Y  LG  R+V   ++YEV                  Y    +Q+              
Sbjct: 162 NKYGALGAFRTVLLLVTYEV-PFLIAIAAVAALGGLSFYGVVDFQKSAWLALLNPIAALV 220

Query: 189 XXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIF-LAEYSSILFIRMILVIINM 365
                 AE+ R PFD  E E+E+V G+N+EY  G F L++ L  Y+  L+   ++ +  +
Sbjct: 221 LFITLLAESERPPFDHPEAEQEIVHGWNVEYGAGEFILLYGLYLYTKALYADALITLFLL 280

Query: 366 GGY------------NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTY-F 506
           GG+                +F +K+  +  LFI VR  L R R D+++ L   KI     
Sbjct: 281 GGWLGPALPGLPVELTNAIWFTVKMVAVFALFILVRAALARPRVDQILELGWTKILALSI 340

Query: 507 IKLFI 521
           + LFI
Sbjct: 341 VALFI 345


>UniRef50_Q02CT6 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
           oxidoreductase subunit H 1 - Solibacter usitatus (strain
           Ellin6076)
          Length = 397

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 25/56 (44%), Positives = 38/56 (67%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGY 374
           AETNR PFD  E E ELV+GF+ EY    FA  F+AEY++++ +  +  ++ +GG+
Sbjct: 218 AETNRVPFDLPEAENELVAGFHTEYSSMKFASFFMAEYANMITVSAMATLLFLGGW 273



 Score = 39.9 bits (89), Expect = 0.035
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +3

Query: 384 FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIF 497
           F+F  K   I F F+ +RGTLPR+RYD+L+    K +F
Sbjct: 341 FWFCAKTGAILFAFMWIRGTLPRFRYDQLMGFTWKFLF 378



 Score = 35.1 bits (77), Expect = 0.98
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ Y+L+GGLRS AQ ISYE+
Sbjct: 143 SNNKYSLIGGLRSSAQMISYEL 164


>UniRef50_Q979M4 Cluster: NADH dehydrogenase I chain E; n=4;
           Thermoplasmatales|Rep: NADH dehydrogenase I chain E -
           Thermoplasma volcanium
          Length = 346

 Score = 58.8 bits (136), Expect = 7e-08
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV----RXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXX 170
           S++ YALLG +R VA+ +S+EV                      +   +  +        
Sbjct: 152 SHNKYALLGAMRGVAKDVSFEVPMMLSAIALVMMDSAVNKTPLEFSSLVSTQFIPFGILQ 211

Query: 171 XXXXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       A ++ TPFD +E + E+VSG++ EY    F L ++  + SI    +++
Sbjct: 212 PLGLFVFMVAMIARSSYTPFDLSESDSEIVSGYSTEYSGMRFGLFYMGMFGSIFLGSLVI 271

Query: 351 VIINMGGYNLRF-----FFYLKLR-----LISFLFI*VRGTLPRYRYDKLIYLAXK 488
            ++ +GGYN  +     F YL ++     LISFL   +  ++PR R D+ +    K
Sbjct: 272 SLLYLGGYNGPYSSYAGFIYLLIKGLIMVLISFL---IWLSMPRIRIDRFVNFGWK 324


>UniRef50_Q8PU59 Cluster: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H); n=2;
           Methanosarcina|Rep: F(420)H(2) oxidoreductase subunit H
           (F(420)H(2) dehydrogenase subunit H) - Methanosarcina
           mazei (Methanosarcina frisia)
          Length = 350

 Score = 58.8 bits (136), Expect = 7e-08
 Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQ-EXXXXXXXXXXX 179
           SN+ Y+LLG  R+ A+ I YEV                        Q             
Sbjct: 151 SNNKYSLLGAFRNFARMIGYEVPLGIAIVSVAVMTGSLNIIDITSAQGSFVWNIFLQPIG 210

Query: 180 XXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    A+  R PFD  E E ELV+G+  EY    F L+F AEY  ++    ++ ++
Sbjct: 211 FVVFFIALMADLGRLPFDQNESEEELVAGWVTEYTGMRFGLVFFAEYMHMILGSFLVALL 270

Query: 360 NMGGYNLRFF---------------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
            +GG+N+  F                 LK  L+    I +R  +PR+R D+++ ++ KK+
Sbjct: 271 FLGGWNVPAFVANNAVLGLIAPTGILLLKTVLVLMTIIGMRWAVPRFRIDQVVDMSWKKL 330


>UniRef50_A3ZL02 Cluster: NADH dehydrogenase I chain H; n=1;
           Blastopirellula marina DSM 3645|Rep: NADH dehydrogenase
           I chain H - Blastopirellula marina DSM 3645
          Length = 434

 Score = 58.4 bits (135), Expect = 9e-08
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--L 380
           A  NR PFD AE E ELVSGF  EY    ++L F+AEY S+  +  +  I+  GG+N  +
Sbjct: 220 ASVNRAPFDLAEAESELVSGFLTEYSGIRWSLFFMAEYGSMFLVSGLAAILFFGGWNGPI 279

Query: 381 RFFFYL 398
             FF++
Sbjct: 280 PIFFWV 285


>UniRef50_Q09KP1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=9; Digenea|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Opisthorchis viverrini
          Length = 226

 Score = 58.4 bits (135), Expect = 9e-08
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF 389
           E NRTP D+AE E ELVSG + EY    F  +F  EY  +     +  ++  GG      
Sbjct: 124 ECNRTPLDYAEAESELVSGLSTEYCNVPFTCLFACEYLIMFIFSWLGSVLFFGG---DVV 180

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK-KIFTYFIKLFI 521
            ++ L  + F FI  R TLPR RYD  I    K  I      +F+
Sbjct: 181 IWVGLLHVVF-FIWARATLPRVRYDYFIEFMWKYSIMILIFSVFV 224


>UniRef50_Q1HBD8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Thaumamermis cosgrovei|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Thaumamermis cosgrovei
          Length = 293

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S +ALLG  RS++Q +S+EV                  Y  +L               
Sbjct: 129 SLSKFALLGSNRSISQVLSFEVNFTMLIFLPFVMKCSMT-YASFLSMSLNFLTILLTGLT 187

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E  R P D +EGE ELVSG+N EY    F  IFLAEYS+++ + M+++++ 
Sbjct: 188 LVM------EVQRAPADLSEGESELVSGYNTEYSSVLFTSIFLAEYSNMMSLNMLMLVLF 241

Query: 363 MGG-YNLRFFFYLKLRLI 413
               Y   F  ++ L L+
Sbjct: 242 FNKVYVSVFMIFITLMLL 259


>UniRef50_O67336 Cluster: NADH-quinone oxidoreductase subunit H;
           n=3; Aquificaceae|Rep: NADH-quinone oxidoreductase
           subunit H - Aquifex aeolicus
          Length = 336

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFY--LYQEXXXXXXXXXX 176
           SNS YA +G LR  A  I+YEV                          Q+          
Sbjct: 143 SNSKYAFIGSLRKAAVVIAYEVVLGFSVLGVILLAGTLSTVGIVEAQIQKGVWFIFYQPV 202

Query: 177 XXXXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAE-YSSILFIRMILV 353
                     AE+ R PFD  E E ELV+G+N+EY    F    LAE Y +++ +  I V
Sbjct: 203 AFILYLFCMLAESGRVPFDIQEAEAELVTGYNVEYGGMKFGAFPLAEWYVNVIALSAIAV 262

Query: 354 IINMGGY---------NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           ++  GG+         +  F+F  K   + F  + +  TLPR++   +  +A K
Sbjct: 263 VLFFGGWDGPHIFGPLSPYFWFVFKTFALVFFTLWLHWTLPRFQAKDITEIAWK 316


>UniRef50_A4GJ19 Cluster: Putative respiratory-chain NADH
           dehydrogenase subunit H; n=1; uncultured Nitrospinaceae
           bacterium|Rep: Putative respiratory-chain NADH
           dehydrogenase subunit H - uncultured Nitrospinaceae
           bacterium
          Length = 358

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+N++LLG +R+ +Q ISYEV                        QE            
Sbjct: 146 SNNNWSLLGSMRTASQMISYEVTMGLTIIGVLMVYGSMKLTEIGTIQENFWMWGIFLQPL 205

Query: 183 XXXXXXXX--AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVI 356
                     AE  R PFD  E E ELV+G+  EY    F + F+AE+  ++ I  I+ I
Sbjct: 206 GFFMFLTASIAENKRIPFDAPEAESELVAGYFTEYSGLKFGMFFMAEFIEMVTIGAIMTI 265

Query: 357 INMGGYNLRF 386
           + +G +++ F
Sbjct: 266 LFLGAWHIPF 275



 Score = 34.7 bits (76), Expect = 1.3
 Identities = 15/49 (30%), Positives = 33/49 (67%)
 Frame = +3

Query: 342 MILVIINMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           ++L++I++G +  +  F++ L+++      +R TLPR+RYD+++ L  K
Sbjct: 295 LVLMLIHVGVFFAKVVFFIYLQMV------IRWTLPRFRYDQIMKLGWK 337


>UniRef50_A7BBX4 Cluster: Putative uncharacterized protein; n=1;
           Actinomyces odontolyticus ATCC 17982|Rep: Putative
           uncharacterized protein - Actinomyces odontolyticus ATCC
           17982
          Length = 442

 Score = 56.8 bits (131), Expect = 3e-07
 Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 16/180 (8%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           + S   L G +RS AQ ISYE+                        Q             
Sbjct: 156 TRSTLPLYGAVRSSAQVISYELAMGLSLVSVFLMSGSMSTSQIVAAQGQFWWAFTLFPAF 215

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                    E NR PFD  E E E+V+G   EY    F   +L+EY ++L +  +   + 
Sbjct: 216 VIYCISAVGEVNRLPFDLPEAEGEIVAGHMTEYSSMKFGWYYLSEYVNMLNVSAVATTMF 275

Query: 363 MGGYNL----------------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKI 494
            GG++                   +F+LK+     L I  R TL R+RYD+ + L  K++
Sbjct: 276 FGGWHAPWPLSHVEFLNSGWWGMLWFFLKIWFFMVLMIWTRATLLRFRYDQFMNLGWKRL 335


>UniRef50_Q0LPS5 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Herpetosiphon aurantiacus ATCC
           23779|Rep: Respiratory-chain NADH dehydrogenase, subunit
           1 - Herpetosiphon aurantiacus ATCC 23779
          Length = 413

 Score = 56.4 bits (130), Expect = 4e-07
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AE  RTPFD  E + E+++G+  EY    FA+ +L+ Y S L +  I   + +GG N   
Sbjct: 216 AEGERTPFDIPEADSEIIAGYMTEYSGMKFAVFYLSNYMSNLAVCFITATLYLGGGNGPG 275

Query: 378 ------------LRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                          +F LK   + F+ + +R T+PR R D+L+  A K
Sbjct: 276 VDALGGFAGGLLSLIYFLLKSFALFFIMVLIRATVPRLRVDQLMGFAWK 324



 Score = 36.3 bits (80), Expect = 0.43
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ +ALLGG+R VAQ ISYE+
Sbjct: 142 SNNKFALLGGMRGVAQLISYEI 163


>UniRef50_Q67KP0 Cluster: NADH-quinone oxidoreductase subunit H 2;
           n=1; Symbiobacterium thermophilum|Rep: NADH-quinone
           oxidoreductase subunit H 2 - Symbiobacterium
           thermophilum
          Length = 394

 Score = 56.4 bits (130), Expect = 4e-07
 Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ Y++LG +R  AQ ISYEV                      L Q+            
Sbjct: 141 SNNKYSMLGAMRGAAQLISYEVTMVMAVIGVVMMAGSLRLSDIVLAQQQRGFLGWFLFPQ 200

Query: 183 XXXXXXXX----AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL 350
                       AE NR PFD AE E+ELV+G + EY    +A+  LAEY  +     I 
Sbjct: 201 IIGFIVYLIASLAELNRAPFDLAEAEQELVAGHHTEYSGFRWAMFMLAEYIHLAAWSAIA 260

Query: 351 VIINMGGYN 377
             + +GG++
Sbjct: 261 ATLFLGGWS 269


>UniRef50_A1ALP6 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Pelobacter propionicus DSM 2379|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Pelobacter propionicus (strain DSM 2379)
          Length = 389

 Score = 55.6 bits (128), Expect = 7e-07
 Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SN+ ++LLG  R+ +Q ISYEV                      ++Q             
Sbjct: 171 SNNKFSLLGAARAASQMISYEVSMGLALISLVVTYGTLDLNDMVVWQSGLLFGVLPAWGI 230

Query: 183 XXXXXXXX-------AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIR 341
                          AE  R PFD  E E ELVSG+  EY      +  L+E+  I+ + 
Sbjct: 231 ILQPLAFVLFLTACIAENKRVPFDLPECESELVSGYFTEYTAMKMGIFMLSEFIEIVVVS 290

Query: 342 MILVIINMGGYNLRF 386
            +LV + +GGYNL +
Sbjct: 291 ALLVTVFLGGYNLPY 305


>UniRef50_Q4Z0A0 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 80

 Score = 55.2 bits (127), Expect = 9e-07
 Identities = 27/38 (71%), Positives = 28/38 (73%)
 Frame = -2

Query: 319 YSAKKIKANPPLLYSILNPETNSLSPSAKSKGVRFVSA 206
           YSA K  AN P  YS LNP+TNS SPS KSKG RFVSA
Sbjct: 13  YSAMKNNANGPAAYSTLNPDTNSDSPSVKSKGARFVSA 50


>UniRef50_Q1IS58 Cluster: NADH-quinone oxidoreductase subunit H 1;
           n=7; cellular organisms|Rep: NADH-quinone oxidoreductase
           subunit H 1 - Acidobacteria bacterium (strain Ellin345)
          Length = 426

 Score = 55.2 bits (127), Expect = 9e-07
 Identities = 25/56 (44%), Positives = 36/56 (64%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGY 374
           AETNR PFD  E E EL +GF+ EY    ++L FL EY +++ +  I V + +GG+
Sbjct: 227 AETNRAPFDLPEAESELTAGFHTEYSGFRWSLFFLGEYVAMIAVSSIAVTLWLGGW 282



 Score = 39.1 bits (87), Expect = 0.060
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YAL+GGLRS AQ +SYEV
Sbjct: 147 SNSKYALMGGLRSAAQMVSYEV 168



 Score = 37.5 bits (83), Expect = 0.18
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 384 FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLFI 521
           F+F  K+ +  +L+I  RGT PRYR+D+L+ +  K +    + + I
Sbjct: 361 FWFSAKVGVFMYLYIWYRGTFPRYRFDQLMKIGWKVLLPVSLGVLI 406


>UniRef50_Q8A0F7 Cluster: NADH-quinone oxidoreductase subunit H;
           n=7; Bacteroidetes|Rep: NADH-quinone oxidoreductase
           subunit H - Bacteroides thetaiotaomicron
          Length = 358

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIR-----------MILV 353
           AE NR PFD  E E EL +G++ EY    F   +LAEY ++  +            M L 
Sbjct: 224 AECNRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNLFIVASVAATIFLGGWMPLH 283

Query: 354 IINMGGYNL-------RFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           II + G+N          +F+ K   + FL + ++ T PR R D+++ L  K
Sbjct: 284 IIGLDGFNAVMDYIPGFIWFFAKAFFVVFLLMWIKWTFPRLRIDQILNLEWK 335


>UniRef50_A7H9V7 Cluster: NADH dehydrogenase (Quinone) precursor;
           n=2; Anaeromyxobacter|Rep: NADH dehydrogenase (Quinone)
           precursor - Anaeromyxobacter sp. Fw109-5
          Length = 450

 Score = 53.2 bits (122), Expect = 3e-06
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 22/127 (17%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AET R PFD  EGE E+V G+ +EY    F L+FL E+  I+ +  ++  + +GG++   
Sbjct: 273 AETKRAPFDLPEGESEIV-GYFVEYSGMRFGLMFLGEFVEIVVLSAVVTAVFLGGWHPLV 331

Query: 378 -----LR------FF-------FYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIF-T 500
                LR      +F       F  K+ ++ +L + +R  LPR+RYD++  L  K +   
Sbjct: 332 VSTEWLRQTLTPLWFGAICAASFLAKMIVLMWLQLTIRWLLPRFRYDQIQKLCWKILLPA 391

Query: 501 YFIKLFI 521
             + +FI
Sbjct: 392 AIVNIFI 398


>UniRef50_A3RE56 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Metaseiulus occidentalis|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Metaseiulus occidentalis
           (western predatory mite)
          Length = 270

 Score = 52.8 bits (121), Expect = 5e-06
 Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS YALLG  R V+QT+SYEV                      ++              
Sbjct: 121 SNSKYALLGAYRLVSQTVSYEVGLVFLLMNFVLLSKSYNLLDLMVFNNFSLMSFYIMFNL 180

Query: 183 XXXXXXXX-AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVII 359
                    AE NR PF F    +       IE+  G FAL+FLAEY +I+F  +     
Sbjct: 181 FLIWLVVMLAELNRAPFVFLWESKSAGFWVYIEFGSGKFALLFLAEYGNIIFFFL----- 235

Query: 360 NMGGYNLRFFFYLKLRLISFL 422
               + + + FY KL +I+ +
Sbjct: 236 ----FEICYIFYKKLNIINVI 252


>UniRef50_Q7GEL5 Cluster: NDH-A protein; n=7; Magnoliophyta|Rep:
           NDH-A protein - Hordeum vulgare (Barley)
          Length = 178

 Score = 52.4 bits (120), Expect = 6e-06
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYN--- 377
           AE  R PFD  E E ELV+G+  EY    + L +L  Y ++L   + + ++ +GG+N   
Sbjct: 39  AECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSI 98

Query: 378 --LRFFFYLKLR--------------------LISFLFI*VRGTLPRYRYDKLIYLAXK 488
             + FF + ++                     L  F+ I +R TLPR R D+L+ L  K
Sbjct: 99  PYISFFDFFQMNKAVGILEMTMGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWK 157


>UniRef50_A7D3R6 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Halorubrum lacusprofundi ATCC 49239
          Length = 357

 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGG----- 371
           AE  R PFD  E   E+V G+  EY    F L +L E+  I     IL ++ +GG     
Sbjct: 236 AEIGRNPFDIPEAPTEIVGGYQTEYSSAYFVLFYLGEFVHIFLGGAILSVVFLGGASGPG 295

Query: 372 -YNLRFFFYLKLRLISFLFI-*VRGTLPRYRYDKLIYLAXK 488
             ++ F +++      FLF    R  +PR R D+LI +  K
Sbjct: 296 PESISFIWFVVKVWGFFLFTQWARAAIPRVRIDQLIEIGWK 336



 Score = 36.3 bits (80), Expect = 0.43
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ Y+LLGGLR+VAQ ++YE+
Sbjct: 157 SNNKYSLLGGLRAVAQNLAYEI 178


>UniRef50_Q9F2V9 Cluster: NADH dehydrogenase subunit NuoH2; n=5;
           Actinomycetales|Rep: NADH dehydrogenase subunit NuoH2 -
           Streptomyces coelicolor
          Length = 322

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S + ++LLGGLR+ AQ ++YE+                      L               
Sbjct: 133 SANKFSLLGGLRTAAQLLAYELPMLLTAASVAMAAGTVSLVGI-LDAFEWWWLPWQIVGA 191

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                   AE  R PFD    + E++ G   EY    FAL  LAEY+ I+ +  +  ++ 
Sbjct: 192 IVFFVAGLAELQRPPFDMPVADSEIIFGAYTEYTGLRFALFLLAEYAGIVVLCGLTTVLF 251

Query: 363 MGGYNLRF--------FFYLKLRLISFLFI*VRGTLPRYRYDKL 470
           +GG++  +        +  LK  +++F+ I +R T PR R D+L
Sbjct: 252 LGGWHGPWGADGLGWVWTLLKAAVLAFVVIWLRVTYPRLREDQL 295


>UniRef50_Q75YP9 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=40; Bradybaenidae|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Euhadra brandtii sapporo
          Length = 87

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 29/78 (37%), Positives = 41/78 (52%)
 Frame = +3

Query: 288 GGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFYLKLRLISFLFI*VRGTLPRYRYDK 467
           G FAL+FL EY+ ILF  M+        + L  +  L   L++ +F+ VRG  PR RYDK
Sbjct: 3   GPFALLFLGEYTVILFTSMLTSACFFSPHYLLLYVGLGF-LVATIFLVVRGAYPRLRYDK 61

Query: 468 LIYLAXKKIFTYFIKLFI 521
           L+ L  K +    I   +
Sbjct: 62  LMDLCWKSVLPLSISCLV 79


>UniRef50_Q9T6M0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Globodera pallida|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Globodera pallida
          Length = 287

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           S S Y+LLG LR  +Q++S+++                  +F  L  E            
Sbjct: 120 SVSKYSLLGSLRLFSQSVSFDL-------VYFFLLFMLVFFFQSLDLEVIFFFLFFILFF 172

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY----SSILFIRMIL 350
                    E NR+PFDF+EGE ELVSG+N+E   GG   IF        SS LF  +  
Sbjct: 173 FFLLLLLVTEANRSPFDFSEGESELVSGYNLEL--GGLVFIFFFPLWMLSSSFLFFSVFF 230

Query: 351 VIINMGGYNLRFF 389
                GG+++ +F
Sbjct: 231 CF--FGGFSVFWF 241


>UniRef50_Q9PMA3 Cluster: NADH-quinone oxidoreductase subunit H;
           n=33; Epsilonproteobacteria|Rep: NADH-quinone
           oxidoreductase subunit H - Campylobacter jejuni
          Length = 332

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF- 386
           ETNRTP    E + E+V+G+  EY    + + F+ EY+S++   +++ ++ +GG+N  + 
Sbjct: 215 ETNRTPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMIAGAILVTLLFLGGFNSFWI 274

Query: 387 -----FFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
                   +K   I F +   R   P+ R D+++
Sbjct: 275 IPGWIMMIVKSSFIFFWYFWARAAFPQLRPDQVM 308


>UniRef50_P08834 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=45; Magnoliophyta|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Citrullus lanatus (Watermelon) (Citrullus
           vulgaris)
          Length = 316

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 30/91 (32%), Positives = 36/91 (39%)
 Frame = +3

Query: 9   SNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXXXX 188
           S YA LG LRS AQ + YEV                      + Q+              
Sbjct: 106 SKYAFLGALRSAAQMVPYEVSIGLILIVRLICVGPRNSSEIVMAQKQIWSGIPLFPVLVM 165

Query: 189 XXXXXXAETNRTPFDFAEGERELVSGFNIEY 281
                 AETNR PFD  E E E V+G+N+EY
Sbjct: 166 FFISRLAETNRAPFDLPEAEAESVAGYNVEY 196


>UniRef50_Q5DNB6 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Leptorhynchoides thecatus|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Leptorhynchoides thecatus
          Length = 305

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMIL--VIINMGGYNLR 383
           E NRTP DF EGE ELVSG   E     F+ + L EY  + F  + +  V++     ++ 
Sbjct: 191 EVNRTPVDFVEGESELVSGLVTEMGGLSFSCLVLGEYGMMCFYSVFISEVMLQFCFDSMM 250

Query: 384 FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           F     L    + F  +R +LPR R D ++ L  K
Sbjct: 251 FVLVFSL-FFMWCFNWLRLSLPRSRCDLMMMLGWK 284


>UniRef50_Q5V276 Cluster: NADH dehydrogenase/oxidoreductase; n=4;
           Halobacteriaceae|Rep: NADH dehydrogenase/oxidoreductase
           - Haloarcula marismortui (Halobacterium marismortui)
          Length = 347

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGG----- 371
           AE  R PFD  E   E+V+G+  EY    F LI+L E+  I     I+  I +GG     
Sbjct: 227 AEVGRNPFDIPEAPTEIVAGYQTEYSSVYFVLIYLGEFIHIFLGGAIIATIFLGGPAGPV 286

Query: 372 YNLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                +F +K+  +       R  +PR R D+LI +  K
Sbjct: 287 LPGIVWFLIKIWGVFLFTQWARSAVPRVRIDQLIEIGWK 325



 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ Y+ LGGLR+VAQ ++YE+
Sbjct: 152 SNNKYSFLGGLRAVAQNLAYEI 173


>UniRef50_A5UXK5 Cluster: NADH dehydrogenase; n=2; Roseiflexus|Rep:
           NADH dehydrogenase - Roseiflexus sp. RS-1
          Length = 452

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY---------SSILFI-----RM 344
           AE  RTPFD  E + E+V+G+  EY    FA  ++A+Y         ++  F+       
Sbjct: 258 AEGERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQYILNFALAALAATAFLGGWQGPG 317

Query: 345 ILVIINMGGYNLR-------FFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
           +  + NMGG  +        F+   K+ ++ F+ I +RG  PR R D+L+  A K
Sbjct: 318 VAALANMGGPWVHAAAALSAFYLLAKIWILFFVMIWLRGAFPRLRVDQLMDFAWK 372



 Score = 33.9 bits (74), Expect = 2.3
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ +ALLG +R+VAQ +SYE+
Sbjct: 146 SNNKFALLGAMRAVAQLVSYEI 167


>UniRef50_Q6LE55 Cluster: NADH ubiquinone oxidoreductase subunit;
           n=3; Cystobacterineae|Rep: NADH ubiquinone
           oxidoreductase subunit - Myxococcus xanthus
          Length = 432

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
 Frame = +3

Query: 210 ETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF- 386
           ET R PFD   GE E++ G+ +EY    F L  ++E+  ++ +  +   +  GGY+L F 
Sbjct: 276 ETKRAPFDLPGGESEII-GYFVEYSCMKFGLFMISEFVEVVVLAGVTTAVFFGGYHLPFG 334

Query: 387 -----------------------FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXK 488
                                   F+LK+  + ++ + +R T PR+RYD++  L  K
Sbjct: 335 NEWLANLPIMQEHGWLLGTILGTVFWLKVLFLIWVQLLIRWTFPRFRYDQIQSLGWK 391


>UniRef50_A6Q8J6 Cluster: NADH-quinone oxidoreductase, chain H; n=2;
           Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
           chain H - Sulfurovum sp. (strain NBC37-1)
          Length = 317

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = +3

Query: 225 PFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFF----- 389
           PF+  + E+E+V GF  EY    + L+ +AE+S  + +      + +G Y   FF     
Sbjct: 201 PFNIPDAEQEIVYGFYTEYSGTNYFLLKMAEFSEFMAVFAGAATLFLGAYKGVFFDGYFW 260

Query: 390 FYLKLRLISFLFI*VRGTLPRYRYDKLI 473
           F+LK+ +I+ L + +R   PR    +++
Sbjct: 261 FFLKMLMIAVLMMTIRAATPRITMKQML 288


>UniRef50_Q00L96 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=120; Protostomia|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Branchellion sp. Borneo
          Length = 205

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 30/81 (37%), Positives = 33/81 (40%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS Y+LLG LR VAQTISYE+                      L               
Sbjct: 126 SNSKYSLLGALRGVAQTISYEISMSLILLSVLLMTMNMDMNKINL-NSMSPLFMSLILIT 184

Query: 183 XXXXXXXXAETNRTPFDFAEG 245
                   AETNR+PFDFAEG
Sbjct: 185 ILWFITNLAETNRSPFDFAEG 205


>UniRef50_O28444 Cluster: F420H2:quinone oxidoreductase, 41.2 kDa
           subunit, putative; n=4; Archaea|Rep: F420H2:quinone
           oxidoreductase, 41.2 kDa subunit, putative -
           Archaeoglobus fulgidus
          Length = 369

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEVRXXXXXXXXXXXXXXXXXYFFYLYQEXXXXXXXXXXXX 182
           SNS +A +G +R      +YEV                  Y     Q             
Sbjct: 176 SNSRFAYIGSVREAFMYFAYEVPFIIAVISMIFLYGSGDAYVAVEKQSAIPGALLNPIAF 235

Query: 183 XXXXXXXXAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIIN 362
                     T+R PF+  E ++E+  G  +EY    F L+ +  Y  +  + ++  I+ 
Sbjct: 236 IVYLIAMLMATSRLPFEIPEADQEIAFGPFVEYSGILFGLVMVLAYEKLYIMTLLFTILF 295

Query: 363 MGGY-----------NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
           +GG+           N   + ++K  ++  + + VR    RYR D+ +
Sbjct: 296 LGGWSGIYCPLLGDLNGPLWMFIKTIVVISILVIVRSIYARYRLDQAL 343


>UniRef50_A2BJ97 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Hyperthermus butylicus DSM 5456|Rep:
           NADH-ubiquinone oxidoreductase chain 1 - Hyperthermus
           butylicus (strain DSM 5456 / JCM 9403)
          Length = 262

 Score = 39.9 bits (89), Expect = 0.035
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
 Frame = +3

Query: 213 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGY------ 374
           T+R PFD   GE+E+V+G   EY    + L    +Y+ +  + M+   + +GG+      
Sbjct: 142 TDRIPFDLVLGEQEIVNGPYTEYSGFLYVLSMALDYAKLYALMMLFTDLFLGGWAPFTGE 201

Query: 375 -NLRFFFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
                  +LK  ++  + + +R    R R DK++
Sbjct: 202 ITGSLAVFLKTVVVMLIAVFLRSVYGRMRLDKMV 235


>UniRef50_Q980H2 Cluster: NADH dehydrogenase subunit H; n=4;
           Sulfolobaceae|Rep: NADH dehydrogenase subunit H -
           Sulfolobus solfataricus
          Length = 352

 Score = 39.5 bits (88), Expect = 0.046
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
 Frame = +3

Query: 213 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF-- 386
           ++R PF+  E E ELV G   EY    F L     Y + L   ++ V + +GG+ L F  
Sbjct: 233 SSRFPFEIVEAETELVIGPYTEYSGFLFVLTMAGSYVANLVYAILFVDLFLGGW-LPFTG 291

Query: 387 -----FFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIF 497
                F   K  ++ F  + +R    RYR D+ +  + K  F
Sbjct: 292 FVGAIFTVFKAAIVVFFAVFLRAVYGRYRIDQALRGSWKYFF 333


>UniRef50_Q2QAT5 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=6; Unionidae|Rep: NADH-ubiquinone oxidoreductase chain
           1 - Lamprotula rochechouarti
          Length = 206

 Score = 38.7 bits (86), Expect = 0.080
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YALLG +R++AQTISYEV
Sbjct: 126 SNSKYALLGAIRAMAQTISYEV 147


>UniRef50_Q7YCU4 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Deroceras sp. 60A-JQ-2003|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Deroceras sp. 60A-JQ-2003
          Length = 145

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YA LG +R+ AQTISYEV
Sbjct: 82  SNSKYAFLGAIRAAAQTISYEV 103


>UniRef50_Q6XZ11 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=2; Biomphalaria|Rep: NADH-ubiquinone oxidoreductase
           chain 1 - Biomphalaria straminea
          Length = 138

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YA LG LR+ AQTISYEV
Sbjct: 79  SNSKYAFLGALRASAQTISYEV 100


>UniRef50_Q5YBJ8 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Spathius sp. MS-2004|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Spathius sp. MS-2004
          Length = 132

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 14/22 (63%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS++++LG +RS+AQ+ISYEV
Sbjct: 69  SNSSFSMLGSIRSIAQSISYEV 90


>UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain
           49kDa; Respiratory-chain NADH dehydrogenase, subunit 1;
           n=2; core eudicotyledons|Rep: NADH-ubiquinone
           oxidoreductase, chain 49kDa; Respiratory-chain NADH
           dehydrogenase, subunit 1 - Medicago truncatula (Barrel
           medic)
          Length = 288

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SN+ Y+ LGGLR+ AQ+ISYE+
Sbjct: 252 SNNKYSFLGGLRAAAQSISYEI 273


>UniRef50_Q7YCX1 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=33; Arion|Rep: NADH-ubiquinone oxidoreductase chain 1
           - Arion ater
          Length = 145

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS YA LG LR+ AQTISYE+
Sbjct: 82  SNSMYAFLGALRASAQTISYEI 103


>UniRef50_Q70VA3 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Cotesia anisotae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Cotesia anisotae
          Length = 129

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 13/22 (59%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   SNSNYALLGGLRSVAQTISYEV 68
           SNS+++++G +RS+AQ+ISYEV
Sbjct: 58  SNSSFSMIGSIRSIAQSISYEV 79


>UniRef50_A1ASR4 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Pelobacter propionicus DSM 2379|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Pelobacter propionicus (strain DSM 2379)
          Length = 303

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = +3

Query: 207 AETNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINM-GGYNLR 383
           A   R PFD +E E E++ G  +EY     AL   A  + ++    + V + +  G  L 
Sbjct: 188 AFVGRAPFDISEAETEIMEGAMVEYSGPKLALFQYANMAKLVVYSALFVSLFVPWGSGLA 247

Query: 384 -----FFFYLKLRLISFLFI*VRGTLPRYRYDKLI 473
                  F++K+  +  L   +  T  RYR D+ I
Sbjct: 248 APISFILFWVKVFAMVLLVTTIAATHARYRIDQAI 282


>UniRef50_Q8PUL3 Cluster: Ech Hydrogenase, Subunit; n=3;
           Methanosarcina|Rep: Ech Hydrogenase, Subunit -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 290

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +3

Query: 219 RTPFDFA---EGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVI 356
           ++PFD++    G +ELV G   EY   GFA I +A +   +F+  ++ +
Sbjct: 180 KSPFDYSTSHHGHQELVKGMTTEYSGPGFATIEIAHFYEYVFLTGLIFL 228


>UniRef50_A1RZ51 Cluster: Respiratory-chain NADH dehydrogenase,
           subunit 1; n=1; Thermofilum pendens Hrk 5|Rep:
           Respiratory-chain NADH dehydrogenase, subunit 1 -
           Thermofilum pendens (strain Hrk 5)
          Length = 337

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 213 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGY 374
           + R PFD  EGE+E+V+G  +EY    F +     Y  +  + ++  ++ + G+
Sbjct: 211 SGRLPFDIVEGEQEIVAGPYVEYTGIVFGIGMGLAYLKLYALSLLYSLLFLSGW 264


>UniRef50_A3DNE8 Cluster: Hydrogenase-4 component C; n=1;
           Staphylothermus marinus F1|Rep: Hydrogenase-4 component
           C - Staphylothermus marinus (strain ATCC 43588 / DSM
           3639 / F1)
          Length = 301

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
 Frame = +3

Query: 213 TNRTPFDFAEGERELVSGFNIEYRRGGFALIFLAEY--SSIL--FIRMILVIINMGGYN- 377
           + R PFD AE E EL SG  IE+      ++    +   +IL  FI  ++++      N 
Sbjct: 186 SGRVPFDLAEAEPELASGVLIEFSGPILGIVLYTNFLKRAILCGFIANLILLPLKSLVND 245

Query: 378 --LRFFFYLKLRLISFLFI*VRGTLPRYRYDKLIYLAXKKIFTYFIKLF 518
             L   FYL L  I  ++  V   L R R D    LA + +F  ++  +
Sbjct: 246 IVLAALFYLLLFFIWLIYAIVSILLARSRID----LAPRTMFVVYLLFY 290


>UniRef50_Q9X0U0 Cluster: NADH dehydrogenase, putative; n=4;
           Thermotogaceae|Rep: NADH dehydrogenase, putative -
           Thermotoga maritima
          Length = 293

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/85 (23%), Positives = 41/85 (48%)
 Frame = +3

Query: 219 RTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFYL 398
           + PFD A    E+ SG  +E       L+ +    S+     + V + +GG +L +F  +
Sbjct: 186 KKPFDIAIAPAEIASGPMVELSGKYLGLLQIMHDFSLFVEISLFVNVFLGGGSLGWFL-V 244

Query: 399 KLRLISFLFI*VRGTLPRYRYDKLI 473
           K   +  + + +   LPR+R ++++
Sbjct: 245 KFVTVWVVAVLISSVLPRFRIEQML 269


>UniRef50_P15576 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=20; Trypanosomatidae|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Leishmania tarentolae
           (Sauroleishmania tarentolae)
          Length = 313

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 219 RTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRF 386
           + PFD+ E E ELV+G   E     F L  + E + IL   ++   +  GG  + F
Sbjct: 204 KLPFDYMECESELVAGLITELSGFFFVLYSVLEINHILLTTLLFASLCFGGLFICF 259


>UniRef50_A6DBV1 Cluster: Ech Hydrogenase, Subunit; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Ech Hydrogenase,
           Subunit - Caminibacter mediatlanticus TB-2
          Length = 276

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 219 RTPFDFAEGERELVSGFNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFYL 398
           ++PFD AE  +E++ G  IEY    +  ++ A++  I ++ +       GG +  ++   
Sbjct: 173 KSPFDVAEAHQEIIGGPEIEYSGPFYEAVYTAKW--IEYVYVFFFAFLFGGSH--YWLGA 228

Query: 399 KLRLISFLFI 428
            L + +F+F+
Sbjct: 229 ILAVFAFIFV 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,164,348
Number of Sequences: 1657284
Number of extensions: 3200374
Number of successful extensions: 7731
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 7405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7631
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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