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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308E12f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0386 + 33555682-33556344,33557138-33557299                      215   1e-56
07_01_0756 + 5819367-5820038,5820847-5821005                          212   1e-55
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216...    47   1e-05
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871     42   2e-04
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975...    29   1.7  
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613...    29   1.7  
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509...    29   2.3  
11_01_0395 + 2999855-2999920,3000605-3002191                           28   5.2  
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400...    27   6.9  
08_01_0312 + 2764744-2767390,2767632-2767990                           27   6.9  
08_02_0675 + 19929932-19930005,19930116-19930222,19931604-199319...    27   9.1  

>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score =  215 bits (526), Expect = 1e-56
 Identities = 96/128 (75%), Positives = 116/128 (90%)
 Frame = +1

Query: 109 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 288
           ++++++WVPVTKLGRLV+EG+  K+E IYL SLP+KE +I++  + P L DEV+KI PVQ
Sbjct: 38  RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQIVETLV-PGLKDEVMKITPVQ 96

Query: 289 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 468
           KQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97  KQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 156

Query: 469 IGKPHTVP 492
           IG+PHTVP
Sbjct: 157 IGQPHTVP 164


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score =  212 bits (518), Expect = 1e-55
 Identities = 96/128 (75%), Positives = 115/128 (89%)
 Frame = +1

Query: 109 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 288
           ++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE +I++  + P L DEV+KI PVQ
Sbjct: 41  RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQIVEQLV-PGLKDEVMKITPVQ 99

Query: 289 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 468
           KQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 100 KQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 159

Query: 469 IGKPHTVP 492
           IGKPHTVP
Sbjct: 160 IGKPHTVP 167


>03_04_0238 -
           19219040-19219218,19220296-19220350,19221606-19221690,
           19222068-19222798
          Length = 349

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/63 (33%), Positives = 39/63 (61%)
 Frame = +1

Query: 256 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 435
           ++ V+++  V K  + G++  F+A V +GD  GH+G+GV  +KEV  AI  A +  + ++
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNL 230

Query: 436 LPV 444
           + V
Sbjct: 231 VTV 233


>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
          Length = 233

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 328 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG-KPHTV 489
           FV +GD + HI LGVKC+K  AT + GAIILA   +     G     I  KPHTV
Sbjct: 2   FVVVGDGDSHIELGVKCAK--ATTMSGAIILA---MFRCAEGATRETISRKPHTV 51


>09_06_0198 -
           21496692-21496991,21497111-21497258,21497341-21497578,
           21497679-21497889,21497977-21498170,21498263-21498364,
           21498525-21499879,21501193-21501494,21501600-21501750,
           21501838-21502102,21502155-21502362,21502467-21502660,
           21502749-21502850,21503481-21503680,21504010-21504846,
           21505806-21506107,21506209-21506359,21506447-21506684,
           21506764-21506971,21507078-21507271,21507322-21507462,
           21513484-21514811,21515923-21516227,21516331-21516481,
           21516570-21516807,21516881-21517088,21517197-21517366,
           21517451-21517549,21517708-21519029,21521601-21521683
          Length = 3314

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 495 QRDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANG 334
           +R  VW++D  TPVT+S+     LS  NS++    D    +   TN+T   A G
Sbjct: 104 RRTVVWVADRGTPVTNSSSSAPTLSLTNSSNLVLSDADGGVRWTTNITDDAAGG 157



 Score = 28.3 bits (60), Expect = 4.0
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 495  QRDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 352
            QR  VW++D  TPVT+++     LS  NS++    D    +   TN+T
Sbjct: 1804 QRTVVWVADRGTPVTNTSSSAPTLSLTNSSNLVLSDADGRVRWSTNIT 1851


>07_03_0681 +
           20659789-20659839,20660030-20660170,20661294-20661399,
           20661625-20661806,20661888-20662113,20662198-20662624,
           20662844-20663189,20663271-20663849
          Length = 685

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -3

Query: 507 PVTLQRDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 352
           P  L  D   ++ +   +  + W NR +++    + G G    ALH  TNM+
Sbjct: 352 PDDLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHHGALHWTTNMS 403


>11_04_0439 +
           17749634-17749858,17750164-17750301,17750770-17750943,
           17751099-17751184,17751264-17751525,17751616-17751815,
           17753631-17754086,17754198-17754474,17754694-17754828,
           17754946-17755026,17756305-17756400,17756676-17756771,
           17756844-17756900,17756975-17757043,17757158-17757237,
           17758185-17758329,17758422-17758511,17758914-17758994,
           17759103-17759198,17759279-17759335,17759417-17759461,
           17759547-17759612,17760304-17760350,17762771-17762865,
           17763375-17763393,17763438-17763498,17763637-17763660
          Length = 1085

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 390 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 274
           +F+A LHT  +M   V      +E C LS    F+ +HD
Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693


>11_01_0395 + 2999855-2999920,3000605-3002191
          Length = 550

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 196 LFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRT 315
           +F   +++ ++IDF L   L D  + I+P+    R G++T
Sbjct: 237 MFGRRVEKEKVIDFLLCSDLPDTYVSILPIIGPHRIGKKT 276


>11_01_0515 +
           4003167-4003229,4003318-4003738,4004224-4004367,
           4004474-4004556,4004661-4004775,4005309-4005400,
           4005558-4005612,4005689-4005834,4005888-4006001,
           4006149-4006342,4006985-4007112,4008526-4008583,
           4009800-4009876,4010214-4010263,4010336-4010515,
           4010633-4010731,4010816-4011133,4011221-4011281,
           4011693-4012781,4012951-4013005,4013133-4013291,
           4013923-4014442
          Length = 1406

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 112 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLG 246
           +  KE +P    G  V  G+    +++ + SLPIK++ +  FF G
Sbjct: 805 DGSKEVIPQEYCGLEVLSGEAAWSKNVLVPSLPIKKYPVHSFFSG 849


>08_01_0312 + 2764744-2767390,2767632-2767990
          Length = 1001

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 20/42 (47%), Positives = 23/42 (54%)
 Frame = +2

Query: 308 SAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCL 433
           + HV   LLPLAT T        +A  +PLP  ALLSL S L
Sbjct: 5   AVHVLLLLLPLATIT--------SASSAPLPLLALLSLRSSL 38


>08_02_0675 +
           19929932-19930005,19930116-19930222,19931604-19931986,
           19932306-19932386,19933249-19933281
          Length = 225

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 299 VPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRS 472
           VP +  +SR L   A    I  W    + ++   F+  LSL+SC+++  E++  ++R+
Sbjct: 156 VPSAEIISRRL---ALFAFIAGWSIVTSAETGPTFQLALSLVSCIYFLNEKMKNLSRA 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,873,232
Number of Sequences: 37544
Number of extensions: 307651
Number of successful extensions: 871
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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