BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E11f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_14952| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33 SB_55731| Best HMM Match : DUF988 (HMM E-Value=7.2) 29 3.1 SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45) 29 3.1 SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_48122| Best HMM Match : PKD_channel (HMM E-Value=0) 27 7.1 SB_46187| Best HMM Match : Phage_integrase (HMM E-Value=1) 27 7.1 SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 >SB_14952| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 451 Score = 31.9 bits (69), Expect = 0.33 Identities = 26/86 (30%), Positives = 39/86 (45%) Frame = +1 Query: 28 FIKKYNLTIYIYDFTFKLNQQITRTFVETGIINLSLPTQMTNQRGAFTSAGPHSFTHKYI 207 F +KY ++ Y FT K + T+ T SL T ++ + S HSFT KY Sbjct: 12 FTRKYQYSLVTYSFTRKYQYSLV-TYSFTRKYQYSLVTYSFTRKYQY-SLVTHSFTRKYQ 69 Query: 208 YNIAPSILLSVNYTHKKIVHAVEKSF 285 Y+ L++ ++T K V SF Sbjct: 70 YS-----LVTYSFTRKYQYSLVTYSF 90 Score = 31.9 bits (69), Expect = 0.33 Identities = 22/86 (25%), Positives = 38/86 (44%) Frame = +1 Query: 28 FIKKYNLTIYIYDFTFKLNQQITRTFVETGIINLSLPTQMTNQRGAFTSAGPHSFTHKYI 207 F +KY + Y FT K + T+ T SL T ++ + S HSFT KY Sbjct: 259 FTRKYQYLLVTYSFTRKYQYSLV-TYSFTRKYQYSLVTYSFTKKYQY-SLVTHSFTRKYQ 316 Query: 208 YNIAPSILLSVNYTHKKIVHAVEKSF 285 Y++ + + Y + + ++ K + Sbjct: 317 YSLV-TYSFTRKYQYSLVTYSFTKKY 341 Score = 31.1 bits (67), Expect = 0.58 Identities = 26/86 (30%), Positives = 39/86 (45%) Frame = +1 Query: 28 FIKKYNLTIYIYDFTFKLNQQITRTFVETGIINLSLPTQMTNQRGAFTSAGPHSFTHKYI 207 F KKY ++ + FT K + T+ T SL T ++ + S HSFT KY Sbjct: 298 FTKKYQYSLVTHSFTRKYQYSLV-TYSFTRKYQYSLVTYSFTKKYQY-SLVTHSFTRKYQ 355 Query: 208 YNIAPSILLSVNYTHKKIVHAVEKSF 285 Y+ L++ ++T K V SF Sbjct: 356 YS-----LVTYSFTRKYQYSLVTYSF 376 Score = 31.1 bits (67), Expect = 0.58 Identities = 26/86 (30%), Positives = 39/86 (45%) Frame = +1 Query: 28 FIKKYNLTIYIYDFTFKLNQQITRTFVETGIINLSLPTQMTNQRGAFTSAGPHSFTHKYI 207 F KKY ++ + FT K + T+ T SL T ++ + S HSFT KY Sbjct: 337 FTKKYQYSLVTHSFTRKYQYSLV-TYSFTRKYQYSLVTYSFTRKYQY-SLVTHSFTRKYQ 394 Query: 208 YNIAPSILLSVNYTHKKIVHAVEKSF 285 Y+ L+ ++T K V+ SF Sbjct: 395 YS-----LVKYSFTKKYQYSLVKYSF 415 >SB_55731| Best HMM Match : DUF988 (HMM E-Value=7.2) Length = 140 Score = 28.7 bits (61), Expect = 3.1 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +2 Query: 197 INTFITLHLQFYYQLIIHTKKSY 265 I+ FI +HLQ Y+L++ K+SY Sbjct: 118 IDRFIAVHLQNSYRLVVSKKRSY 140 >SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45) Length = 480 Score = 28.7 bits (61), Expect = 3.1 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 284 FLSLQIHYSLHYYKSNIFRYNPFIDRVILA 373 F + Q+ Y L YYK +F NP +DR+I A Sbjct: 301 FSNEQVEYRLKYYKKFMFVRNP-LDRIISA 329 >SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 127 Score = 28.3 bits (60), Expect = 4.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 364 NTSDDTTNNKYNTIKNRQNTNES 432 NTS++ +N K NT +NR NT + Sbjct: 7 NTSENQSNTKRNTSENRSNTRRN 29 >SB_48122| Best HMM Match : PKD_channel (HMM E-Value=0) Length = 1589 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 385 NNKYNTIKNRQNTNESRVTGRQCS 456 NNK N+ +NR++ E RVT R S Sbjct: 352 NNKLNSCRNRESNPEPRVTPRLSS 375 >SB_46187| Best HMM Match : Phage_integrase (HMM E-Value=1) Length = 348 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 290 SLQIHYSLHYYKSNIFRYNP 349 S+ HY L +YK N RY P Sbjct: 28 SMNSHYGLSFYKKNEHRYEP 47 >SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 150 Score = 27.1 bits (57), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 385 NNKYNTIKNRQNTNESRVTGR 447 NN N+I NR NTN + + R Sbjct: 40 NNNNNSINNRNNTNNNSINNR 60 Score = 27.1 bits (57), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 385 NNKYNTIKNRQNTNESRVTGR 447 NN N+I NR NTN + + R Sbjct: 63 NNNNNSINNRNNTNNNSINNR 83 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,162,400 Number of Sequences: 59808 Number of extensions: 268946 Number of successful extensions: 1640 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1592 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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