Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308E11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec...    29   5.1  
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P...    29   5.1  
BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    28   6.7  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    28   6.7  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    28   6.7  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    28   6.7  
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.    28   6.7  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    28   8.8  

>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone
           receptor co-activatorTaiman protein.
          Length = 2035

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 364 NTSDDTTNNKYNTIKNRQNTNESRVTGRQCS 456
           N S  TTNN  N+  N  NT++ + T  +CS
Sbjct: 308 NNSTTTTNNNTNS-NNNNNTSKPQATSTRCS 337


>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
           protein.
          Length = 2047

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 364 NTSDDTTNNKYNTIKNRQNTNESRVTGRQCS 456
           N S  TTNN  N+  N  NT++ + T  +CS
Sbjct: 308 NNSTTTTNNNTNS-NNNNNTSKPQATSTRCS 337


>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 84  STNNSYVRRNWNNQPQSSNTNDKSKGG 164
           STN +    N NN   SS+ N+ S GG
Sbjct: 474 STNTTSANNNANNNSSSSHNNNNSSGG 500


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 84  STNNSYVRRNWNNQPQSSNTNDKSKGG 164
           STN +    N NN   SS+ N+ S GG
Sbjct: 477 STNTTSANNNANNNSSSSHNNNNSSGG 503


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 84  STNNSYVRRNWNNQPQSSNTNDKSKGG 164
           STN +    N NN   SS+ N+ S GG
Sbjct: 394 STNTTSANNNANNNSSSSHNNNNSSGG 420


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 84  STNNSYVRRNWNNQPQSSNTNDKSKGG 164
           STN +    N NN   SS+ N+ S GG
Sbjct: 474 STNTTSANNNANNNSSSSHNNNNSSGG 500


>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
          Length = 1990

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 328 EHIQIQPVH*PCNTSDDTTNNKYNTIKNRQNTNE 429
           EH+    +H PC  ++  TNN  N   N  N NE
Sbjct: 748 EHMNSHAMHFPCLKANAVTNNNNNN-NNTNNNNE 780


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 328 EHIQIQPVH*PCNTSDDTTNNKYNTIKNRQNTNES 432
           EH+    +H PC  ++  TNN  N      N N +
Sbjct: 748 EHMNSHAMHFPCLKANAVTNNNNNNNNTNNNNNNN 782


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,312,782
Number of Sequences: 53049
Number of extensions: 383574
Number of successful extensions: 1341
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)