Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308E08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 424 VKKLNNLWPLARQVYSTFFGCPIVF 498
           V K  N+W   +  Y    G PI+F
Sbjct: 147 VAKFKNMWTRFQLKYYQVTGTPIIF 171


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 424 VKKLNNLWPLARQVYSTFFGCPIVF 498
           V K  N+W   +  Y    G PI+F
Sbjct: 147 VAKFKNMWTRFQLKYYQVTGTPIIF 171


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 178 PKAHISTLWSIFRLSQVS 125
           P+A + TLW  F L+ ++
Sbjct: 2   PRARLVTLWLAFNLASIA 19


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 45  WSANQRNMLEENLALFTTPMYR--APE 119
           W +N+R  L + +    TP+ R  APE
Sbjct: 267 WFSNRRARLRKQITSAATPLVRSYAPE 293


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 448 PLARQVYSTFFGCPIVFSF 504
           PL   V S+ + C ++FSF
Sbjct: 227 PLLFSVSSSSYNCEVLFSF 245


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 418 LSVKKLNNLWPLARQVYSTFFGCPIVF 498
           + V+KL+ L      +++  FG P+VF
Sbjct: 216 IEVRKLSRLLGEMVGLFNDIFGWPLVF 242


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 33  PNPSWSANQRNMLEENLALFTTPMY 107
           P PS S NQ      NL   T P Y
Sbjct: 340 PTPSQSPNQIYQPVTNLTNLTYPSY 364


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 56   PKKYVGRKFGLIHYAYVP 109
            P+++   K+G+I+Y  VP
Sbjct: 996  PQEFNCLKYGVIYYVTVP 1013


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 56   PKKYVGRKFGLIHYAYVP 109
            P+++   K+G+I+Y  VP
Sbjct: 996  PQEFNCLKYGVIYYVTVP 1013


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,788
Number of Sequences: 336
Number of extensions: 3131
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)