BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E07f (521 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 30 0.18 SPAC2E1P5.02c |mug109||sequence orphan|Schizosaccharomyces pombe... 30 0.18 SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.32 SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.42 SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 27 1.3 SPCC16C4.15 |rml2||mitochondrial ribosomal protein subunit L2|Sc... 26 3.9 SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 26 3.9 SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 25 5.2 SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 5.2 SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces pomb... 25 5.2 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 5.2 SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 25 6.8 SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 25 6.8 SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 25 6.8 SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 25 9.0 SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 25 9.0 SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 9.0 SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 25 9.0 SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 25 9.0 SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.0 SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 25 9.0 SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 25 9.0 >SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 1563 Score = 30.3 bits (65), Expect = 0.18 Identities = 29/124 (23%), Positives = 52/124 (41%) Frame = +3 Query: 108 LRPISVRRRATGWATASCSG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRS 287 ++P + G T +G A++A+ + A TE+ +A T+ ATT + Sbjct: 1168 VQPTTGATGTAGTETQVTTGTETQATTATETQATTATEVQTTTGATGTAG-TETQATTAT 1226 Query: 288 AISWCTGYTGTASRCNLTPGSSAWRPATQTTHTSSGPSNRKRPTGEIDSY*EHENRHLNS 467 + TG TGTA ++ +P T T T +G + E + E + + Sbjct: 1227 EVQPTTGATGTAGTETQVTTATEVQPTTGATGT-AGTETQVTTGTETQATTATETQATTA 1285 Query: 468 TKIQ 479 T++Q Sbjct: 1286 TEVQ 1289 Score = 30.3 bits (65), Expect = 0.18 Identities = 29/124 (23%), Positives = 52/124 (41%) Frame = +3 Query: 108 LRPISVRRRATGWATASCSG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRS 287 ++P + G T +G A++A+ + A TE+ +A T+ ATT + Sbjct: 1250 VQPTTGATGTAGTETQVTTGTETQATTATETQATTATEVQTTTGATGTAG-TETQATTAT 1308 Query: 288 AISWCTGYTGTASRCNLTPGSSAWRPATQTTHTSSGPSNRKRPTGEIDSY*EHENRHLNS 467 + TG TGTA ++ +P T T T +G + E + E + + Sbjct: 1309 EVQPTTGATGTAGTETQVTTATEVQPTTGATGT-AGTETQVTTGTETQATTATETQATTA 1367 Query: 468 TKIQ 479 T++Q Sbjct: 1368 TEVQ 1371 Score = 29.9 bits (64), Expect = 0.24 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +3 Query: 261 TDRGATTRSAISWCTGYTGTASRCNLTPGSSAWRPATQTTHTSS 392 T+ ATT + + TG TGTA ++ +P T T TSS Sbjct: 1360 TETQATTATEVQTTTGATGTAGTETQVTTATEVQPTTAVTETSS 1403 >SPAC2E1P5.02c |mug109||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 163 Score = 30.3 bits (65), Expect = 0.18 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 506 LR*XPQIFILNFCGVEMTVLVFSIRVDLTSWAFSV*RSTAGMCCL 372 +R P+ I C V + V++F V W+F + S AG+ CL Sbjct: 108 IRLDPKYSIPGVCAVTLIVIMFLAPVGRLFWSFCIVSSFAGLHCL 152 >SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharomyces pombe|chr 2|||Manual Length = 1016 Score = 29.5 bits (63), Expect = 0.32 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 358 GALRPKQHIPAVDRQTENAQLVRSTRIENTRTVISTPQKFN 480 G+LR H + +QTE +R+ +E RT S +FN Sbjct: 218 GSLRNVTHSAGISKQTEMIVAIRAEDLERARTRPSRTDRFN 258 >SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 534 Score = 29.1 bits (62), Expect = 0.42 Identities = 22/103 (21%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Frame = +3 Query: 135 ATGWATASCSG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYT 314 ++ +++ S M +SS S+S + I + S+ + ++++S+ S+ + + Sbjct: 314 SSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVS 373 Query: 315 GTASRCNLT---PGSSAWRPATQTTHTSSGPSNRKRPTGEIDS 434 ++S + T SS+ RPA+ ++H+SS S++ + + S Sbjct: 374 SSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSS 416 >SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces pombe|chr 1|||Manual Length = 580 Score = 27.5 bits (58), Expect = 1.3 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 384 TSSGPSNRKRPTGEIDSY*EHENRHLNSTKIQYEY 488 +S G S PTG ID Y E +H K+ Y Sbjct: 7 SSIGTSLTPSPTGSIDEYTSKEVKHPEDVKVDASY 41 >SPCC16C4.15 |rml2||mitochondrial ribosomal protein subunit L2|Schizosaccharomyces pombe|chr 3|||Manual Length = 318 Score = 25.8 bits (54), Expect = 3.9 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 69 KRLVPAWIQWGKPLRPISVRRRATG 143 KR V ++ GKP RP++V +R G Sbjct: 25 KRPVSDYLWKGKPFRPLTVAKRKKG 49 >SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 656 Score = 25.8 bits (54), Expect = 3.9 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = +2 Query: 272 SYNEERHQLVHRLHGHCLTLQPHSGQLGLAPCD---PNNTYQQWT 397 SY+ R Q +HRL + H +L ++P + PNN + T Sbjct: 22 SYSSRRSQQIHRLSHSPMAEGFHKPKLNISPSESNLPNNVAENTT 66 >SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 550 Score = 25.4 bits (53), Expect = 5.2 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 243 QMACLTLSPSVSTHRSPTPSWP--ASFNLNNWLLPIPWHDD 127 Q A ++LS S + S P P A +LNN+ P+P + D Sbjct: 189 QTAPISLSSEGSDYFSRPPPTPNVAGLSLNNFFCPLPENKD 229 >SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces pombe|chr 3|||Manual Length = 693 Score = 25.4 bits (53), Expect = 5.2 Identities = 14/52 (26%), Positives = 22/52 (42%) Frame = +1 Query: 334 TSLRAARPGALRPKQHIPAVDRQTENAQLVRSTRIENTRTVISTPQKFNMNI 489 TSLR++RP R + + R+ + T RT K+N +I Sbjct: 520 TSLRSSRPSWTRSRSMASKLPREKMLVFVAGGTTFSELRTCYELSDKYNKDI 571 >SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces pombe|chr 1|||Manual Length = 431 Score = 25.4 bits (53), Expect = 5.2 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 Query: 269 WSYNEERHQLVHRLHGHCL 325 +SY ++RH L+H L CL Sbjct: 197 FSYRKQRHTLIHDLPNTCL 215 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 25.4 bits (53), Expect = 5.2 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 318 TASRCNLTPGSSAWRPATQTTHTSSGPSNRK 410 TAS + + SS++ PA+ T+ T+S S+R+ Sbjct: 735 TASTSSGSSSSSSYTPASSTSTTTSSVSSRQ 765 >SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 425 Score = 25.0 bits (52), Expect = 6.8 Identities = 22/83 (26%), Positives = 38/83 (45%) Frame = +3 Query: 177 PASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTASRCNLTPGSSA 356 PASSASAS + E + R + ++ A + T + ++SR + +P + Sbjct: 67 PASSASASPVKKSAEALAERSNSSMGTFDPPPRYSKIARARST-HVASSSR-HRSPSHND 124 Query: 357 WRPATQTTHTSSGPSNRKRPTGE 425 P+TQ++ S G R + E Sbjct: 125 SSPSTQSSLKSRGSIRRYKSVRE 147 >SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 502 Score = 25.0 bits (52), Expect = 6.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 323 LTLQPHSGQLGLAPCDPNNTYQQWTVKQKT 412 L L P SG LA +NT + W VK +T Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLRT 260 >SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 533 Score = 25.0 bits (52), Expect = 6.8 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = -2 Query: 451 FSCSQYESISPVGRFLFDGPLLVCVVWVAGRQAEL 347 FS +++SP+ F F G L++ W A L Sbjct: 305 FSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSL 339 >SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 527 Score = 24.6 bits (51), Expect = 9.0 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 273 ATTRSAISWCTGYTGTASRCNLTPGSSAWRPATQTTHTSS 392 A +RSA S Y+ T R +TP ++ +Q +SS Sbjct: 334 ARSRSAYSTSANYSNTPPRNTVTPSTARSSTLSQNPSSSS 373 >SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual Length = 307 Score = 24.6 bits (51), Expect = 9.0 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 Query: 96 WGKPLRPISVRRRATGWATA 155 WG P PIS+ R +G+ A Sbjct: 36 WGYPASPISIARTTSGFLIA 55 >SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 711 Score = 24.6 bits (51), Expect = 9.0 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +1 Query: 43 RSLGDGEEQSDWCLLGYN-GESRSGLYRYV-VVPRD 144 RSL + +SDWC L + S S RY +VP D Sbjct: 436 RSLAFNDSKSDWCCLASSRSTSISRKNRYTDIVPYD 471 >SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 420 Score = 24.6 bits (51), Expect = 9.0 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 Query: 41 NVHWGMVKNKATGACLDTMGKAAPAYIGTS 130 N WG +K T C +++G+ A GTS Sbjct: 206 NYRWGSLKLLKTPLCAESIGEMGFAVGGTS 235 >SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 962 Score = 24.6 bits (51), Expect = 9.0 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 293 QLVHRLHGHCLTLQPHSGQLGLAP 364 QL HRL +CL L + + G AP Sbjct: 19 QLGHRLDANCLVLGRYFSEQGSAP 42 >SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 1036 Score = 24.6 bits (51), Expect = 9.0 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%) Frame = +3 Query: 177 PASSAS---ASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTASRCNLTPG 347 P SSAS ++ PT + F ++ L +T + S +G+++ L+ Sbjct: 694 PTSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSST 753 Query: 348 SSAWRPATQTTHTSSGPSNRKRPTG 422 ++ T+T ++SG + RPTG Sbjct: 754 LTSSIIPTETFGSTSGSATGTRPTG 778 Score = 24.6 bits (51), Expect = 9.0 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 9/88 (10%) Frame = +3 Query: 183 SSASASGAWRPTEIMLNRPFADSARLTDRGATT-------RSAISWCTGYT-GTASRCNL 338 ++AS +G PT N P + T G T S S+ T GT + + Sbjct: 828 TTASGTGGGNPTAAPTNEPTVTTGTETTEGTATYTEPTTFTSTFSFTTTIIGGTTTIIPV 887 Query: 339 TPGS-SAWRPATQTTHTSSGPSNRKRPT 419 PG+ S+ A TT + GP P+ Sbjct: 888 NPGNPSSSVSAPPTTSFTPGPGGSGYPS 915 >SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 304 Score = 24.6 bits (51), Expect = 9.0 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +3 Query: 183 SSASASGAWRPTEIMLNRPFADSARL 260 SS+ S A R ++ +N PF D RL Sbjct: 278 SSSGGSNAQRSEDLDVNNPFGDHNRL 303 >SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 309 Score = 24.6 bits (51), Expect = 9.0 Identities = 9/31 (29%), Positives = 18/31 (58%) Frame = +2 Query: 161 FRLNEAGQLGVGERCVETDGDNVKQAICRLG 253 ++L++ +L ++C + D N + A C LG Sbjct: 3 YKLDQLTRLPENKKCFDCDAPNPQWASCNLG 33 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,216,144 Number of Sequences: 5004 Number of extensions: 46930 Number of successful extensions: 178 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 178 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 212331630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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