BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E07f (521 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g09000.1 68416.m01053 proline-rich family protein 33 0.12 At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 0.82 At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 30 0.82 At2g22720.3 68415.m02692 expressed protein 29 1.9 At2g22720.2 68415.m02691 expressed protein 29 1.9 At2g22720.1 68415.m02693 expressed protein 29 1.9 At3g19850.1 68416.m02514 phototropic-responsive NPH3 family prot... 28 3.3 At2g31920.1 68415.m03899 expressed protein 28 3.3 At3g20260.1 68416.m02566 expressed protein 28 4.4 At2g17470.1 68415.m02017 expressed protein contains Pfam profile... 28 4.4 At5g43100.1 68418.m05261 aspartyl protease family protein low si... 27 5.8 At4g15236.1 68417.m02335 ABC transporter family protein similar ... 27 7.7 At3g62200.1 68416.m06988 expressed protein contains Pfam profile... 27 7.7 At3g59410.1 68416.m06626 protein kinase family protein low simil... 27 7.7 At3g44200.1 68416.m04739 protein kinase family protein contains ... 27 7.7 At2g04190.1 68415.m00404 meprin and TRAF homology domain-contain... 27 7.7 At1g79960.1 68414.m09346 ovate protein-related contains TIGRFAM ... 27 7.7 At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 27 7.7 >At3g09000.1 68416.m01053 proline-rich family protein Length = 541 Score = 33.1 bits (72), Expect = 0.12 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Frame = +3 Query: 147 ATASCSG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTAS 326 +++S +G RP+SS S+ RP R T R TTR++ S + T S Sbjct: 137 SSSSVAGLRRPSSSGSSRSTSRPA--TPTRRSTTPTTSTSRPVTTRASNSRSSTPT---S 191 Query: 327 RCNLTPG-SSAWRPATQTTHTSSGPSNRKRPT 419 R LT ++ A +TT TSSG + PT Sbjct: 192 RATLTAARATTSTAAPRTTTTSSGSARSATPT 223 >At3g04960.1 68416.m00538 expressed protein low similarity to SP|P32380 NUF1 protein (Spindle poly body spacer protein SPC110) {Saccharomyces cerevisiae} Length = 556 Score = 30.3 bits (65), Expect = 0.82 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +2 Query: 290 HQLVHRLHGHCLTLQPHSGQLGLAPCDPNNTYQQWTVKQKTP 415 H++ H + G +T+ P G+ D T++ + +QKTP Sbjct: 411 HEMYHTIRGQYVTINPRKGETWALFGDWTKTWKSHSEQQKTP 452 >At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing protein low similarity to SP|Q27974 Auxilin {Bos taurus}; contains Pfam profile PF00226: DnaJ domain Length = 1448 Score = 30.3 bits (65), Expect = 0.82 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Frame = +3 Query: 180 ASSASASGAWRPTEIMLNRPFAD-SARLTDRGATTRSAISWCTGYTGTASRCNLTPGSSA 356 A AS R + R + R ++ + +SA S Y G+ S + G Sbjct: 1227 AEKASMQAKLRAERAAVERAITEVRERAMEKALSGKSAASQAKSYGGSKSFSS--SGERR 1284 Query: 357 WRPATQTTHTSSGPSNRKRPTGE 425 ++ T + SSGPSN TGE Sbjct: 1285 GSSSSGTENKSSGPSNSSNQTGE 1307 >At2g22720.3 68415.m02692 expressed protein Length = 569 Score = 29.1 bits (62), Expect = 1.9 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +3 Query: 162 SG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTASRCNLT 341 SG RPASS S RP +RP + +++ R A++ S +G AS + Sbjct: 272 SGSGRPASSGSQMQNSRPQN---SRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQR 328 Query: 342 PGSSAWRPATQTTHTSSGPSN 404 PGSS R A S N Sbjct: 329 PGSSTNRQAPMRPPGSGSTMN 349 >At2g22720.2 68415.m02691 expressed protein Length = 672 Score = 29.1 bits (62), Expect = 1.9 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +3 Query: 162 SG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTASRCNLT 341 SG RPASS S RP +RP + +++ R A++ S +G AS + Sbjct: 375 SGSGRPASSGSQMQNSRPQN---SRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQR 431 Query: 342 PGSSAWRPATQTTHTSSGPSN 404 PGSS R A S N Sbjct: 432 PGSSTNRQAPMRPPGSGSTMN 452 >At2g22720.1 68415.m02693 expressed protein Length = 340 Score = 29.1 bits (62), Expect = 1.9 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +3 Query: 162 SG*MRPASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISWCTGYTGTASRCNLT 341 SG RPASS S RP +RP + +++ R A++ S +G AS + Sbjct: 43 SGSGRPASSGSQMQNSRPQN---SRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQR 99 Query: 342 PGSSAWRPATQTTHTSSGPSN 404 PGSS R A S N Sbjct: 100 PGSSTNRQAPMRPPGSGSTMN 120 >At3g19850.1 68416.m02514 phototropic-responsive NPH3 family protein contains NPH3 family domain, Pfam:PF03000 Length = 554 Score = 28.3 bits (60), Expect = 3.3 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +3 Query: 177 PASSASASGAWRPTEIMLNRPFADSARLTDRGATTRSAISW 299 P+SSASAS + + E + R ++D R T R + R++ W Sbjct: 169 PSSSASASASSQSPETAMIRSYSDK-RSTSRSFSCRTSNEW 208 >At2g31920.1 68415.m03899 expressed protein Length = 585 Score = 28.3 bits (60), Expect = 3.3 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +2 Query: 8 DVYDKFPKLPKNVHWGMVKNKATGACLDTMGKAAPAYIGTSSCHGMGNSQLFRLNEAGQL 187 D+Y K VH + +N+ G+C + K A +++ + G LF+ E G+ Sbjct: 370 DIYHNTQNTCKAVHRLLTQNRNNGSCRLVVNKNATSWVQAAVVTGFSQFNLFK--EPGKK 427 Query: 188 G 190 G Sbjct: 428 G 428 >At3g20260.1 68416.m02566 expressed protein Length = 437 Score = 27.9 bits (59), Expect = 4.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 402 NRKRPTGEIDSY*EHENRHLNST 470 ++K+P G I + H N H+NST Sbjct: 322 DKKKPNGGIHLFGNHNNNHVNST 344 >At2g17470.1 68415.m02017 expressed protein contains Pfam profile PF01027: Uncharacterized protein family UPF0005 Length = 538 Score = 27.9 bits (59), Expect = 4.4 Identities = 21/73 (28%), Positives = 28/73 (38%) Frame = +3 Query: 18 ISSRSSLRTFTGGW*RTKRLVPAWIQWGKPLRPISVRRRATGWATASCSG*MRPASSASA 197 I S+S L + W TK A + ++ + W T S S PAS Sbjct: 373 IDSKSYLLVNSESWAATKEKAEAEEYEEEAHETKVIKSLSQIWDTNSSSNNQNPASGNDE 432 Query: 198 SGAWRPTEIMLNR 236 S W TE M+ R Sbjct: 433 SQIWESTESMMLR 445 >At5g43100.1 68418.m05261 aspartyl protease family protein low similarity to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease Length = 631 Score = 27.5 bits (58), Expect = 5.8 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = -3 Query: 309 SRCTS*WRSSL*LHGPS-TVPSLQMACLTLSPSVSTHRSPTPSWPASFNL 163 + C+ WR P+ T P Q +SPS +T SPT P F + Sbjct: 415 TNCSDIWRRLAAPESPAPTSPISQNKSSNISPSPATSESPTSHLPGVFRV 464 >At4g15236.1 68417.m02335 ABC transporter family protein similar to pleiotropic drug resistance like protein [Nicotiana tabacum] GI:20522008, ABC1 protein [Nicotiana plumbaginifolia] GI:14331118; contains Pfam profile PF00005: ABC transporter Length = 1388 Score = 27.1 bits (57), Expect = 7.7 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 15 TISSRSS-LRTFTGGW*RTKRLVPAWIQWGKPLRPIS 122 TI S S L + GG+ K +P+W++WG L P+S Sbjct: 652 TIGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLS 688 >At3g62200.1 68416.m06988 expressed protein contains Pfam profile PF04396: Protein of unknown function, DUF537 Length = 673 Score = 27.1 bits (57), Expect = 7.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 228 TLSPSVSTHRSPTPSWPASFNLNNW 154 T PSVST R P P+ P+S N+N + Sbjct: 260 TSEPSVSTSRPPPPNLPSS-NVNTF 283 >At3g59410.1 68416.m06626 protein kinase family protein low similarity to GCN2 eIF2alpha kinase [Mus musculus] GI:6066585; contains Pfam profiles PF03129: Anticodon binding domain, PF00069: Protein kinase domain Length = 1241 Score = 27.1 bits (57), Expect = 7.7 Identities = 13/44 (29%), Positives = 27/44 (61%) Frame = -2 Query: 442 SQYESISPVGRFLFDGPLLVCVVWVAGRQAELPGVRLQREAVPV 311 + +E + P+G+ F G +++C + GRQ + +RL+ + +PV Sbjct: 423 NDFEELKPLGQGGF-GHVVLCKNKLDGRQYAVKKIRLKDKEIPV 465 >At3g44200.1 68416.m04739 protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 Length = 941 Score = 27.1 bits (57), Expect = 7.7 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 286 APSAGAPATRALPHAATSLRAAR-PGALRPKQHIPAVD 396 A S+ A+ +P + + +AR PG+ PK H+P +D Sbjct: 420 AHSSKTNASTPIPPSKLASDSARTPGSFPPKHHMPVID 457 >At2g04190.1 68415.m00404 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 411 Score = 27.1 bits (57), Expect = 7.7 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +2 Query: 50 WGMVKNKATGACLDTMGKAAPAYIGTSSCHGMGNSQLFRLNEAGQLGVGER 202 WG K G+C+ G PA+ G G G R++ G G+G R Sbjct: 10 WGDFPGKGVGSCVFGGGGGGPAFGGRGGGPGRGYGGGPRVHGPG-YGIGSR 59 >At1g79960.1 68414.m09346 ovate protein-related contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 Length = 294 Score = 27.1 bits (57), Expect = 7.7 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 327 RCNLTPGSSAWRPATQTTHTSSGPSNR 407 R + PGSS RP+ +TT TSS +R Sbjct: 157 RLSPPPGSSEGRPSMETTSTSSERQSR 183 >At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from [Triticum aestivum] Length = 330 Score = 27.1 bits (57), Expect = 7.7 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 240 FADSARLTDRGATTRSAISWCTGYTGTASRCNLTPGSSAWRPATQTTHTSSGPSNRKRPT 419 F +A L + +T S C TG+++ +T G++ P+TQT + S PT Sbjct: 200 FGGAASLVNTNPSTGS----CIYQTGSSTSTPMTAGTTTPTPSTQTVNQPPVTSTPIIPT 255 Query: 420 G 422 G Sbjct: 256 G 256 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,913,158 Number of Sequences: 28952 Number of extensions: 260140 Number of successful extensions: 864 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 862 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 957410176 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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