Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS308E04f
         (517 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   2.0  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.6  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   8.1  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 165 RKFTSPEELEE-QRKHDEQKKKWRKEQ 242
           R+  S +  E+ Q+  D+Q+++WR++Q
Sbjct: 172 RRMESQQRQEQRQQLEDQQRQRWRQQQ 198


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 150 HKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242
           H  RNR+     + +EQR+  +Q ++  ++Q
Sbjct: 206 HSSRNRRGRQGPQQQEQRQQQQQHQQREQQQ 236


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 183 EELEEQRKHDEQKKKWR 233
           E+ + + KHD+  K WR
Sbjct: 147 EDEDHEMKHDDDGKPWR 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,187
Number of Sequences: 2352
Number of extensions: 3432
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)