BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS308E04f (517 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 2.0 M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 24 2.6 AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 23 8.1 >AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein protein. Length = 527 Score = 24.6 bits (51), Expect = 2.0 Identities = 9/27 (33%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = +3 Query: 165 RKFTSPEELEE-QRKHDEQKKKWRKEQ 242 R+ S + E+ Q+ D+Q+++WR++Q Sbjct: 172 RRMESQQRQEQRQQLEDQQRQRWRQQQ 198 >M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. Length = 613 Score = 24.2 bits (50), Expect = 2.6 Identities = 9/31 (29%), Positives = 18/31 (58%) Frame = +3 Query: 150 HKGRNRKFTSPEELEEQRKHDEQKKKWRKEQ 242 H RNR+ + +EQR+ +Q ++ ++Q Sbjct: 206 HSSRNRRGRQGPQQQEQRQQQQQHQQREQQQ 236 >AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. Length = 165 Score = 22.6 bits (46), Expect = 8.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +3 Query: 183 EELEEQRKHDEQKKKWR 233 E+ + + KHD+ K WR Sbjct: 147 EDEDHEMKHDDDGKPWR 163 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 323,187 Number of Sequences: 2352 Number of extensions: 3432 Number of successful extensions: 9 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 46937349 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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